GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 276 - 300 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Digestion of dietary carbohydrate
  • Chia
  • Chit1
  • LOC120100609
  • Lct
  • Lph
  • Si
Rattus norvegicus (Norway rat)
NGF-stimulated transcription
  • Chd4
  • Creb-1
  • Creb1
  • Egr-2
  • Egr2
  • Krox-20
  • Krox20
  • Nab2
  • Sgk
  • Sgk1
  • Srf
Rattus norvegicus (Norway rat)
Regulation of PTEN gene transcription
  • Chd3
  • Chd4
  • ENSRNOG00000066475
  • Frap1
  • Gatad2a
  • Gatad2b
  • Gbl
  • Hdac1
  • Hdac2
  • LOC686412
  • Lamtor1
  • Lamtor3
  • Lamtor4
  • Lamtor5
  • Lst8
  • Maf1
  • Map2k1ip1
  • Mbd3
  • Mlst8
  • Mta1
  • Mta2
  • Mta3
  • Mtor
  • Raft1
  • Rbbp4
  • Rbbp7
  • Rheb
  • Rptor
  • RragB
  • Rraga
  • Rragc
  • Rragc_predicted
  • Rragd
  • Sall4
  • Slc38a9
  • Zg29
Rattus norvegicus (Norway rat)
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion
  • Cgef2
  • Epac
  • Epac1
  • Epac2
  • Gcg
  • Glp1r
  • Glpr
  • Gnas
  • Gnas1
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Insp3r
  • Itpr1
  • Itpr2
  • Itpr3
  • Kcnb1
  • Kcnc2
  • Kcng2
  • Kcns3
  • Krev1
  • Pkacb
  • Prkaca
  • Prkacb
  • Rap1a
  • Rapgef3
  • Rapgef4
Rattus norvegicus (Norway rat)
Glycoprotein hormones
  • Cga
  • Cga1
  • Fshb
  • Inha
  • Inhba
  • Inhbb
  • Inhbc
  • Inhbe
  • Lhb
  • Tshb
Rattus norvegicus (Norway rat)
Hormone ligand-binding receptors
  • Cga
  • Cga1
  • Fshb
  • Fshr
  • Gnrh
  • Gnrh1
  • Gnrhr
  • Gpa2
  • Gpb5
  • Gpha2
  • Gphb5
  • Lhb
  • Lhcgr
  • Tshb
  • Tshr
  • Zsig51
Rattus norvegicus (Norway rat)
Thyroxine biosynthesis
  • Cga
  • Cga1
  • Dehal1
  • Duox1
  • Duox2
  • Iyd
  • Lnox2
  • Nis
  • Slc5a5
  • Thox2
  • Tpo
  • Tshb
Rattus norvegicus (Norway rat)
Androgen biosynthesis
  • Cga
  • Cga1
  • Cyp17
  • Cyp17a1
  • Edh17b3
  • Hsd17b12
  • Hsd17b3
  • Hsd3b
  • Hsd3b1
  • Hsd3b5
  • Hsd3b5-ps1
  • Hsd3b6
  • Lhb
  • Pomc
  • Pomc2
  • Srd5a1
  • Srd5a2
  • Srd5a3
Rattus norvegicus (Norway rat)
Mineralocorticoid biosynthesis
  • Cga
  • Cga1
  • Cyp11b-2
  • Cyp11b2
  • Cyp21
  • Cyp21a1
  • Hsd3b
  • Hsd3b1
  • Hsd3b5
  • Hsd3b5-ps1
  • Hsd3b6
  • Lhb
Rattus norvegicus (Norway rat)
Extrinsic Pathway of Fibrin Clot Formation
  • Cf3
  • Cf9
  • F10
  • F3
  • F7
  • F9
  • Tfpi
Rattus norvegicus (Norway rat)
Physiological factors
  • Ces1d
  • Ces3
  • Cnp
  • Corin
  • Mme
  • Nppa
  • Nppc
  • Npr1
  • Npr2
Rattus norvegicus (Norway rat)
Synthesis of PE
  • Cept1
  • Chetk
  • Chk
  • Chka
  • Chkb
  • Chkl
  • Ckr
  • Ept1
  • Etnk1
  • Etnk2
  • Etnppl
  • LOC687071
  • Lpin1
  • Lpin2
  • Lpin3
  • Pcyt2
  • Phospho1
  • Selenoi
Rattus norvegicus (Norway rat)
Deposition of new CENPA-containing nucleosomes at the centromere
  • Cenpc
  • Cenpc1
  • Cenph
  • Cenpi
  • Cenpk
  • Cenpl
  • Cenpm
  • Cenpn
  • Cenpo
  • Cenpp
  • Cenpq
  • Cenpr
  • Cenpt
  • Cenpu
  • Cenpw
  • Cug2
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Fshprh1
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist4
  • Hist4h4
  • Hjurp
  • Itgb3bp
  • Knl1
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC679342
  • LOC681185
  • LOC684797
  • Lrpr1
  • Mis18a
  • Mis18bp1
  • Mlf1ip
  • Npm1
  • Nrif3
  • Oip5
  • Rbbp4
  • Rbbp7
  • Rsf1
  • Ruvbl1
  • Smarca5
  • Th2b
  • Tip49
  • Tip49a
Rattus norvegicus (Norway rat)
Digestion of dietary lipid
  • Cel
  • Clps
  • Lipf
  • Plrp1
  • Plrp2
  • Pnlip
  • Pnliprp1
  • Pnliprp2
Rattus norvegicus (Norway rat)
Fibronectin matrix formation
  • Ceacam1
  • Fn1
  • Itga5
  • Itgb1
Rattus norvegicus (Norway rat)
Switching of origins to a post-replicative state
  • Cdt1
  • Gmnn
Rattus norvegicus (Norway rat)
Ligand-receptor interactions
  • Cdo
  • Cdon
  • Dhh
  • Hhip
  • Ihh
  • Ptch
  • Ptch1
  • Shh
  • Vhh-1
Rattus norvegicus (Norway rat)
DARPP-32 events
  • Cdk5
  • Cdkn5
  • Dpde1
  • PSSALRE
  • Pde4a
  • Pde4b
  • Pde4c
  • Pde4d
  • Pkacb
  • Ppp1a
  • Ppp1ca
  • Ppp1r1b
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkaca
  • Prkacb
  • Prkar1a
  • Prkar1b
  • Prkar2a
  • Prkar2b
Rattus norvegicus (Norway rat)
CRMPs in Sema3A signaling
  • Cdk5
  • Cdk5r
  • Cdk5r1
  • Cdkn5
  • Crmp1
  • Crmp3
  • Crmp4
  • Dpysl1
  • Dpysl2
  • Dpysl3
  • Dpysl4
  • Dpysl5
  • Fes
  • Fyn
  • Gsk3b
  • Nrp1
  • PSSALRE
  • Plxna1
  • Plxna2
  • Plxna3
  • Plxna4
  • Plxna4a
  • Sema3a
  • Ulip4
  • Ulip6
Rattus norvegicus (Norway rat)
Oncogene Induced Senescence
  • Cdk4
  • Cdk6
  • Cdkn2b
  • Cdkn2d
  • Erf
  • Erk1
  • Erk2
  • Ets-1
  • Ets1
  • Ets2
  • Id-1
  • Id1
  • Ink4
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Mdm2
  • Mdm4
  • Mdmx
  • P53
  • Prkm1
  • Prkm3
  • Rps27a
  • Tp53
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Synthesis of PI
  • Cdipt
  • Cds
  • Cds1
  • Nir2
  • Pis1
  • Pitpnm
  • Pitpnm1
  • Pitpnm2
  • Pitpnm3
Rattus norvegicus (Norway rat)
Attachment of GPI anchor to uPAR
  • Cdc91l1
  • Gpaa1
  • Pgap1
  • Pigs
  • Pigt
  • Pigu
  • Plaur
Rattus norvegicus (Norway rat)
Hedgehog 'on' state
  • Cdc73
  • Cul3
  • Dzip1
  • Evc
  • Evc2
  • Gli1
  • Gli2
  • Gli3
  • Gpr161
  • Hrpt2
  • Itch
  • Kif7
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Numb
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Ptch
  • Ptch1
  • Rbx1
  • Ring12
  • Rps27a
  • Smo
  • Smoh
  • Smurf1
  • Smurf2
  • Spop
  • Spopl
  • Sufu
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ulk3
Rattus norvegicus (Norway rat)
DCC mediated attractive signaling
  • Cdc42
  • Dcc
  • Fak
  • Fak1
  • Fyn
  • Nck1
  • Ptk2
  • Rac
  • Rac1
  • Src
  • Trio
Rattus norvegicus (Norway rat)
Drug-mediated inhibition of ERBB2 signaling
  • Cdc37
  • Erbb2
  • Hsp86
  • Hsp90aa1
  • Hspca
  • Neu
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024