GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
Initiation of Nuclear Envelope (NE) Reformation
  • AABR07021955.1
  • Ankle2
  • Baf
  • Banf1
  • Ccnb1
  • Ccnb2
  • Ccnb2-ps2
  • Cdc2
  • Cdc2a
  • Cdk1
  • Cdkn1
  • Emd
  • Kpnb1
  • L2bp1
  • Lbr
  • Lem4
  • Lmn1
  • Lmna
  • Lmnb1
  • Ppp2ca
  • Ppp2r1a
  • Ppp2r2a
  • Rbm39
  • Sir2l2
  • Sirt2
  • Vrk1
  • Vrk2
Rattus norvegicus (Norway rat)
RHOU GTPase cycle
  • Arhgap30
  • Arhgap31
  • Arhgef6
  • Arhgef7
  • Ash
  • Cdc42
  • Cltc
  • Depdc1b
  • Dlg5
  • Dst
  • Epha2
  • Fak2
  • Git1
  • Git2
  • Grb2
  • Hgs
  • Hrs
  • Hrs2
  • Iqgap1
  • Itsn2
  • Myo6
  • Nck1
  • Nck2
  • Pak1
  • Pak2
  • Pak3
  • Pak3bp
  • Pak4
  • Par-6a
  • Par6a
  • Pard6a
  • Peak1
  • Pik3r1
  • Pik3r2
  • Pixb
  • Ptk2b
  • Pyk2
  • RGD1312026
  • Rhou
  • Spna2
  • Spta2
  • Sptan1
  • Sptbn1
  • Srgap2
  • Stam
  • Stam2
  • Trp
  • Txnl1
  • Vangl1
  • Wdr6
  • Wwp2
Rattus norvegicus (Norway rat)
Glucocorticoid biosynthesis
  • Cbg
  • Cyp11b-1
  • Cyp11b-2
  • Cyp11b-3
  • Cyp11b1
  • Cyp11b2
  • Cyp11b3
  • Cyp17
  • Cyp17a1
  • Cyp21
  • Cyp21a1
  • Hsd11
  • Hsd11b1
  • Hsd11b2
  • Hsd11k
  • Hsd3b
  • Hsd3b1
  • Hsd3b5
  • Hsd3b5-ps1
  • Hsd3b6
  • Pomc
  • Pomc2
  • Serpina6
Rattus norvegicus (Norway rat)
Asymmetric localization of PCP proteins
  • Dvl2
  • Fzd1
  • Fzd2
  • Fzd3
  • Fzd4
  • Fzd5
  • Fzd7
  • Fzd8
  • LOC100360645
  • LOC100360846
  • LOC100361515
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Par-6a
  • Par6a
  • Pard6a
  • Prickle1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rilp
  • Ring12
  • Rps27a
  • Smurf1
  • Smurf2
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Wnt-5a
  • Wnt5a
Rattus norvegicus (Norway rat)
Transcriptional regulation of white adipocyte differentiation
  • Hdac3
  • Ncor2
  • Nr1c3
  • Nr2b1
  • Pparg
  • Rxra
Rattus norvegicus (Norway rat)
PI-3K cascade:FGFR2
  • Ash
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-7
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr2
  • Frs2
  • Gab1
  • Grb2
  • Kgf
  • Pik3ca
  • Pik3r1
  • Ptpn11
Rattus norvegicus (Norway rat)
Elevation of cytosolic Ca2+ levels
  • Insp3r
  • Itpr1
  • Itpr2
  • Itpr3
  • P2rx1
  • P2rx2
  • P2rx3
  • P2rx4
  • P2rx5
  • P2rx6
  • P2rx7
  • P2rxl1
  • Trpc3
  • Trpc7
  • Trrp3
Rattus norvegicus (Norway rat)
Stabilization of p53
  • Atm
  • LOC100360645
  • Mdm2
  • Mdm4
  • Mdmx
  • P53
  • Phf20
  • Rps27a
  • Tp53
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
SUMOylation of SUMOylation proteins
  • Aaas
  • Gp210
  • LOC683983
  • Mrnp41
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Pcnt1
  • Pias4
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Sec13
  • Sec13l1
  • Smt3a
  • Smt3h2
  • Sumo1
  • Sumo2
  • Tmem48
  • Topors
  • Tpr
  • Ubce9
  • Ube2i
Rattus norvegicus (Norway rat)
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion
  • Cgef2
  • Epac
  • Epac1
  • Epac2
  • Gcg
  • Glp1r
  • Glpr
  • Gnas
  • Gnas1
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Insp3r
  • Itpr1
  • Itpr2
  • Itpr3
  • Kcnb1
  • Kcnc2
  • Kcng2
  • Kcns3
  • Krev1
  • Pkacb
  • Prkaca
  • Prkacb
  • Rap1a
  • Rapgef3
  • Rapgef4
Rattus norvegicus (Norway rat)
Neurotransmitter receptors and postsynaptic signal transmission
  • 5ht3
  • Glra1
  • Glra2
  • Glra3
  • Glrb
  • Glyr
  • Htr3
  • Htr3a
  • Htr3b
Rattus norvegicus (Norway rat)
WNT ligand biogenesis and trafficking
  • Gpr177
  • Snx3
  • Tmed5
  • Vps26
  • Vps26a
  • Vps29
  • Vps35
  • Wls
  • Wnt-4
  • Wnt-5a
  • Wnt1
  • Wnt10a
  • Wnt10b
  • Wnt11
  • Wnt16
  • Wnt2b
  • Wnt3
  • Wnt3a
  • Wnt4
  • Wnt5a
  • Wnt5b
  • Wnt6
  • Wnt7a
  • Wnt7b
  • Wnt8a
  • Wnt8b
  • Wnt9a
  • Wnt9b
Rattus norvegicus (Norway rat)
Dissolution of Fibrin Clot
  • Anx2
  • Anxa2
  • Hrg
  • Hrg1
  • Pai1
  • Pai2
  • Pi7
  • Planh1
  • Planh2
  • Plat
  • Plau
  • Plaur
  • Plg
  • Pn1
  • S100a10
  • Serpinb2
  • Serpinb6a
  • Serpinb8
  • Serpine1
  • Serpine2
  • Serpinf2
Rattus norvegicus (Norway rat)
Insulin receptor recycling
  • Aif1
  • Atp6ap1
  • Atp6b2
  • Atp6c
  • Atp6ip1
  • Atp6l
  • Atp6n1
  • Atp6s1
  • Atp6s14
  • Atp6v0a1
  • Atp6v0a4
  • Atp6v0b
  • Atp6v0c
  • Atp6v0d1
  • Atp6v0d2
  • Atp6v0e
  • Atp6v0e1
  • Atp6v0e2
  • Atp6v1a
  • Atp6v1b1
  • Atp6v1b2
  • Atp6v1c1
  • Atp6v1c2
  • Atp6v1d
  • Atp6v1e1
  • Atp6v1e2
  • Atp6v1f
  • Atp6v1g1
  • Atp6v1g2
  • Atp6v1g3
  • Atp6v1h
  • Atpl
  • Bat1a
  • Cdk2ap1-ps2
  • Cdk2ap1-ps3
  • Cdk2ap1-ps4
  • Cdk2ap1-ps5
  • Cdk2ap1-ps6
  • Ctsd
  • Dsr1
  • E230034O05Rik
  • Ide
  • Ins-1
  • Ins1
  • Insr
  • LOC224733l-3
  • LOC224733l-4
  • LOC224733l-5
  • LOC224733l-6
  • LOC224733l-7
  • LOC224733l-8
  • Lar
  • Lst1
  • Ptpn1
  • Ptprf
  • RT1-CE12
  • RT1-CE3
  • RT1-CE5
  • RT1-CE6
  • RT1-CE8
  • RT1-CE9
  • Sacm2l-ps3
  • Sacm2l-ps4
  • Sacm2l-ps5
  • Sacm2l-ps6
  • Sacm2l-ps7
  • Tcirg1
  • Tnf
  • Vat2
  • Vatf
  • Vpp1
Rattus norvegicus (Norway rat)
Intestinal hexose absorption
  • Glut2
  • Glut5
  • Sglt1
  • Slc2a2
  • Slc2a5
  • Slc5a1
Rattus norvegicus (Norway rat)
Class B/2 (Secretin family receptors)
  • Adgre1
  • Adgre5
  • Cd55
  • Crf2r
  • Crh
  • Crhbp
  • Crhr
  • Crhr1
  • Crhr2
  • Emr1
  • Pth
  • Pth1r
  • Pth2
  • Pth2r
  • Pthlh
  • Pthr
  • Pthr1
  • Pthr2
  • Pthrp
  • Tip39
  • Tipf39
  • Ucn
  • Ucn2
  • Ucn3
Rattus norvegicus (Norway rat)
Nucleotide catabolism
  • Samhd1
Rattus norvegicus (Norway rat)
Eukaryotic Translation Elongation
  • Eef1a
  • Eef1a1
  • Eef1b2
  • Eef1d
  • Eef1g
Rattus norvegicus (Norway rat)
Glyoxylate metabolism and glycine degradation
  • Agt1
  • Agt2
  • Agxt
  • Agxt2
  • Aldh4a1
  • Dao
  • Dao1
  • Ddo
  • Fbp-cII
  • Gnmt
  • Got2
  • Grhpr
  • Hao1
  • Hoga1
  • Hypdh
  • LOC100911156
  • Maat
  • Prodh2
Rattus norvegicus (Norway rat)
Dopamine receptors
  • Drd2
  • Drd3
  • Drd4
  • Drd5
Rattus norvegicus (Norway rat)
TNFR1-mediated ceramide production
  • Cca1
  • Gnb2l1
  • Nsmaf
  • Rack1
  • Smpd2
  • Smpd3
  • Tnf
  • Tnfa
  • Tnfr-1
  • Tnfr1
  • Tnfrsf1a
  • Tnfsf2
Rattus norvegicus (Norway rat)
CLEC7A (Dectin-1) induces NFAT activation
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Cna2
  • Cnb
  • Nfat4
  • Nfatc1
  • Nfatc2
  • Nfatc3
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
Rattus norvegicus (Norway rat)
IKK complex recruitment mediated by RIP1
  • Birc2
  • Birc3
  • Cd14
  • Chuk
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC100360645
  • Ly96
  • Nemo
  • Plin3
  • Rip3
  • Ripk1
  • Ripk3
  • Rps27a
  • Sarm1
  • Ticam1
  • Ticam2
  • Tlr4
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubc4
  • Ubcep1
  • Ubch4
  • Ubch5b
  • Ubcl1
  • Ube2d1
  • Ube2d2
  • Ube2d3
Rattus norvegicus (Norway rat)
Vitamin B5 (pantothenate) metabolism
  • Aasdhppt
  • Fang1
  • Fasn
  • Gda
  • Pank4
  • Pdzd11
  • Slc25a16
  • Slc25a42
  • Slc5a6
  • Smvt
  • Vnn1
Rattus norvegicus (Norway rat)
Interaction between L1 and Ankyrins
  • Ank1
  • Caml1
  • L1cam
  • Spna2
  • Spnb3
  • Spta1
  • Spta2
  • Sptan1
  • Sptb
  • Sptbn1
  • Sptbn2
  • Sptbn4
  • Sptbn5
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024