GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 426 - 450 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Leukotriene receptors
  • Blt
  • Cyslt1
  • Cyslt2
  • Cysltr1
  • Cysltr2
  • Gpr17
  • Ltb4r
  • Ltb4r2
Rattus norvegicus (Norway rat)
Triglyceride catabolism
  • Blbp
  • FABP12
  • Fabp1
  • Fabp2
  • Fabp3
  • Fabp4
  • Fabp5
  • Fabp6
  • Fabp7
  • Fabp9
  • Fabpi
  • Gpd2
  • Ilbp
  • Illbp
  • Perf15
  • Pnpla4
  • Pnpla5
  • RGD1562200
Rattus norvegicus (Norway rat)
TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway
  • Birc2
  • Birc3
  • Cd40
  • Cd40l
  • Cd40lg
  • Lta
  • Ltb
  • Ltbr
  • Map3k14
  • Opgl
  • Rankl
  • Tnfb
  • Tnfrsf11a
  • Tnfrsf12a
  • Tnfrsf13c
  • Tnfsf1
  • Tnfsf11
  • Tnfsf12
  • Tnfsf13b
  • Tnfsf14
  • Tnfsf5
  • Tnlg1d
  • Tnlg4a
  • Traf2
  • Traf3
  • Trance
Rattus norvegicus (Norway rat)
TNFR2 non-canonical NF-kB pathway
  • Birc2
  • Birc3
  • Cd40
  • Cd40l
  • Cd40lg
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Lta
  • Ltb
  • Ltbr
  • Map3k14
  • Mecl1
  • Mss1
  • Opgl
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rankl
  • Ring12
  • Sug1
  • Tbp1
  • Tbp7
  • Tnf
  • Tnfa
  • Tnfb
  • Tnfr2
  • Tnfrsf11a
  • Tnfrsf12a
  • Tnfrsf13c
  • Tnfrsf1b
  • Tnfsf1
  • Tnfsf11
  • Tnfsf12
  • Tnfsf13b
  • Tnfsf14
  • Tnfsf2
  • Tnfsf5
  • Tnlg1d
  • Tnlg4a
  • Traf2
  • Traf3
  • Trance
Rattus norvegicus (Norway rat)
IKK complex recruitment mediated by RIP1
  • Birc2
  • Birc3
  • Cd14
  • Chuk
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC100360645
  • Ly96
  • Nemo
  • Plin3
  • Rip3
  • Ripk1
  • Ripk3
  • Rps27a
  • Sarm1
  • Ticam1
  • Ticam2
  • Tlr4
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubc4
  • Ubcep1
  • Ubch4
  • Ubch5b
  • Ubcl1
  • Ube2d1
  • Ube2d2
  • Ube2d3
Rattus norvegicus (Norway rat)
Gamma-carboxylation of protein precursors
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Ggcx
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Gas6
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
Removal of aminoterminal propeptides from gamma-carboxylated proteins
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Fur
  • Furin
  • Gas6
  • Pcsk3
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
NADE modulates death signalling
  • Bex3
  • Casp2
  • Casp3
  • Cpp32
  • Ich1
  • Nade
  • Ngf
  • Ngfb
  • Ngfr
  • Ngfrap1
  • Tnfrsf16
  • Ywhae
Rattus norvegicus (Norway rat)
Peptide hormone biosynthesis
  • Bdp
  • Nec-1
  • Nec1
  • Pcsk1
  • Pomc
  • Pomc2
Rattus norvegicus (Norway rat)
Activated NTRK2 signals through PLCG1
  • Bdnf
  • Nt4
  • Ntf4
  • Ntf5
  • Ntrk2
  • Plcg1
  • Trkb
Rattus norvegicus (Norway rat)
NTRK2 activates RAC1
  • Bdnf
  • Dock3
  • Fyn
  • Ntrk2
  • Rac
  • Rac1
  • Trkb
Rattus norvegicus (Norway rat)
Opsins
  • Bcp
  • Gcp
  • Opn1mw
  • Opn1sw
  • Opn3
  • Opn4
  • Opn5
  • Rgr
  • Rho
  • Rrh
Rattus norvegicus (Norway rat)
Activation of BIM and translocation to mitochondria
  • Bcl2l11
  • Bim
  • Bod
  • Dncl1
  • Dnclc1
  • Dynll1
  • Jnk1
  • Mapk8
  • Pin
  • Prkm8
Rattus norvegicus (Norway rat)
CLEC7A (Dectin-1) signaling
  • Bcl10
  • Card9
  • Chuk
  • Clec7a
  • Ikbkb
  • Ikbkg
  • Ikkb
  • Malt1
  • Map3k7
  • Map3k7ip2
  • Nemo
  • Pkcd
  • Plcg2
  • Prkcd
  • Src
  • Tab1
  • Tab2
  • Tab3
  • Traf6
Rattus norvegicus (Norway rat)
Activation of NF-kappaB in B cells
  • Bcl10
  • Btrc
  • Card11
  • Chuk
  • Cul1
  • Fbxw11
  • Ikba
  • Ikbb
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Malt1
  • Mecl1
  • Mss1
  • Nemo
  • Nfkbia
  • Nfkbib
  • Nfkbie
  • Pkcb
  • Prkcb
  • Prkcb1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rela
  • Ring12
  • Rps27a
  • Skp1
  • Skp1a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
E3 ubiquitin ligases ubiquitinate target proteins
  • Bcl10
  • Bre1b
  • Cdc73
  • Ctr9
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hrpt2
  • LOC100360645
  • LOC100365043
  • LOC100366017
  • LOC100910200
  • LOC684797
  • Leo1
  • NEWGENE_1308361
  • Paf1
  • Paf3
  • Pex10
  • Pex12
  • Pex14
  • Pex2
  • Pex5
  • Pex5_predicted
  • Pmp35
  • Prkdc
  • Pxmp3
  • RGD1562407
  • Rad6b
  • Rnf144a
  • Rnf181
  • Rnf20
  • Rnf40
  • Rps27a
  • Skic8
  • Th2b
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubc4
  • Ubcep1
  • Ubch4
  • Ubch5b
  • Ubcl1
  • Ube2a
  • Ube2b
  • Ube2d1
  • Ube2d2
  • Ube2d3
  • Ube2e1
  • Ube2l3
  • WAC
  • Wac
  • Wdr61
Rattus norvegicus (Norway rat)
Synthesis, secretion, and deacylation of Ghrelin
  • Bche
  • Bdp
  • Gcg
  • Gh
  • Gh1
  • Ghrl
  • Goat
  • Igf-1
  • Igf1
  • Ins-1
  • Ins1
  • Lep
  • Mboat4
  • Nec-1
  • Nec1
  • Ob
  • Pcsk1
  • Sec11a
  • Sec11c
  • Sec11l1
  • Sec11l3
  • Spc18
  • Spc21
  • Spcs1
  • Spcs2
  • Spcs3
Rattus norvegicus (Norway rat)
Metal ion SLC transporters
  • Bcg
  • Copt1
  • Cp
  • Ctr1
  • Dct1
  • Dmt1
  • Fpn1
  • Fpt1
  • Heph
  • Nramp1
  • Nramp2
  • Slc11a1
  • Slc11a2
  • Slc30a10
  • Slc31a1
  • Slc40a1
  • Slc41a1
  • Slc41a2
Rattus norvegicus (Norway rat)
Cellular response to mitochondrial stress
  • Bcap37
  • Dele
  • Dele1
  • Eif2a
  • Eif2ak1
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Hri
  • Oma1
  • Phb2
  • Stoml2
  • Yme1l1
Rattus norvegicus (Norway rat)
Apoptotic execution phase
  • Bcap31
  • Casp8
  • Dlp1
  • Dnm1l
  • Drp1
  • Mst3
  • Stk24
  • Stk3
Rattus norvegicus (Norway rat)
Dermatan sulfate biosynthesis
  • Bcan
  • Behab
  • Bgn
  • Caleb
  • Chst14
  • Cspg2
  • Cspg3
  • Cspg4
  • Cspg5
  • Dcn
  • Dse
  • Dsel
  • Ncan
  • Ng2
  • Ngc
  • Ust
  • Vcan
Rattus norvegicus (Norway rat)
Chondroitin sulfate biosynthesis
  • Bcan
  • Behab
  • Bgn
  • Caleb
  • Chpf
  • Chpf2
  • Chst11
  • Chst12
  • Chst13
  • Chst15
  • Chst3
  • Chst7
  • Chst9
  • Chsy1
  • Chsy3
  • Csgalnact1
  • Csgalnact2
  • Cspg2
  • Cspg3
  • Cspg4
  • Cspg5
  • Dcn
  • Galnac4s6st
  • Ncan
  • Ng2
  • Ngc
  • Vcan
Rattus norvegicus (Norway rat)
Downregulation of ERBB2 signaling
  • Batk
  • Btc
  • Cdc37
  • Ctk
  • Cul5
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Hsp86
  • Hsp90aa1
  • Hspca
  • LOC100360645
  • Matk
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Ptpn12
  • Ptpn18
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vacm1
Rattus norvegicus (Norway rat)
Repression of WNT target genes
  • Bars
  • Ctbp1
  • Ctbp2
  • Ctbp3
  • Esp2
  • Esp3
  • Grg4
  • Lef1
  • Tcf7
  • Tcf7l1
  • Tcf7l2
  • Tle1
  • Tle2
  • Tle3
  • Tle4
Rattus norvegicus (Norway rat)

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Supported by JST NBDC Grant Number JPMJND2204

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