GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 26 - 50 of 1070 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Activated NTRK2 signals through FRS2 and FRS3
  • Ash
  • Bdnf
  • Frs2
  • Grb2
  • Nt4
  • Ntf4
  • Ntf5
  • Ntrk2
  • Sos1
  • Trkb
Rattus norvegicus (Norway rat)
Activated NTRK2 signals through PLCG1
  • Bdnf
  • Nt4
  • Ntf4
  • Ntf5
  • Ntrk2
  • Plcg1
  • Trkb
Rattus norvegicus (Norway rat)
Activated NTRK3 signals through PI3K
  • Ntf-3
  • Ntf3
  • Ntrk3
  • Src
  • Trkc
Rattus norvegicus (Norway rat)
Activated NTRK3 signals through PLCG1
  • Ntf-3
  • Ntf3
  • Ntrk3
  • Plcg1
  • Trkc
Rattus norvegicus (Norway rat)
Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3
  • Ar
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Kdm1a
  • Kdm4c
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Ncoa2
  • Nr3c4
  • Pkn
  • Pkn1
  • Prk1
  • Prkcl1
  • Th2b
  • Tif2
Rattus norvegicus (Norway rat)
Activation of AMPA receptors
  • GluA1
  • GluA2
  • GluA3
  • Glur1
  • Glur2
  • Glur3
  • Glur4
  • Gria1
  • Gria2
  • Gria3
  • Gria4
Rattus norvegicus (Norway rat)
Activation of BAD and translocation to mitochondria
  • Bad
  • Cna2
  • Cnb
  • Msfs1
  • Ppp3cc
  • Ppp3r1
  • Sfn
  • Ywhab
  • Ywhae
  • Ywhag
  • Ywhah
  • Ywhaq
  • Ywhaz
Rattus norvegicus (Norway rat)
Activation of BIM and translocation to mitochondria
  • Bcl2l11
  • Bim
  • Bod
  • Dncl1
  • Dnclc1
  • Dynll1
  • Jnk1
  • Mapk8
  • Pin
  • Prkm8
Rattus norvegicus (Norway rat)
Activation of BMF and translocation to mitochondria
  • Bmf
  • Dlc2
  • Dynll2
  • Jnk1
  • Mapk8
  • Prkm8
Rattus norvegicus (Norway rat)
Activation of C3 and C5
  • C2
  • C3
  • C4
  • C4a
  • C4b
  • C5
  • Cfb
Rattus norvegicus (Norway rat)
Activation of Ca-permeable Kainate Receptor
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Dlg1
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh3
  • Dlgh4
  • Glur5
  • Glur6
  • Glur7
  • Grik1
  • Grik2
  • Grik3
  • Grik4
  • Grik5
  • Ncald
  • Psd95
Rattus norvegicus (Norway rat)
Activation of G protein gated Potassium channels
  • Gabbr1
  • Gabbr2
  • Girk1
  • Girk2
  • Girk3
  • Girk4
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Gpr51
  • Irk1
  • Irk2
  • Irk3
  • Kab-2
  • Kcnj10
  • Kcnj12
  • Kcnj15
  • Kcnj16
  • Kcnj2
  • Kcnj3
  • Kcnj4
  • Kcnj5
  • Kcnj6
  • Kcnj7
  • Kcnj9
  • Kga
Rattus norvegicus (Norway rat)
Activation of IRF3, IRF7 mediated by TBK1, IKKε (IKBKE)
  • Cd14
  • Ikbke
  • Irf3
  • Irf7
  • LOC100360645
  • Ly96
  • Optn
  • Plin3
  • Ptpn11
  • Rps27a
  • Sarm1
  • Tank
  • Tbk1
  • Ticam1
  • Ticam2
  • Tlr4
  • Traf3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Activation of Matrix Metalloproteinases
  • Cma1
  • Col18a1
  • Ctrb
  • Ctrb1
  • Ctsg
  • Ctsk
  • Ctsl
  • Ctsl1
  • ENSRNOG00000066972
  • ENSRNOG00000067174
  • ENSRNOG00000069479
  • ENSRNOG00000071144
  • Elane
  • Fur
  • Furin
  • Klk-1
  • Klk-10
  • Klk-12
  • Klk-2
  • Klk-7
  • Klk-8
  • Klk-9
  • Klk1
  • Klk10
  • Klk12
  • Klk1c4
  • Klk1c6
  • Klk2
  • Klk3
  • Klk6
  • Klk7
  • Klk8
  • Klk9
  • Klkb1
  • Klks3
  • LOC100365995
  • LOC102554637
  • LOC683849
  • Mcp6
  • Mcpt3
  • Mcpt6
  • Mmp-7
  • Mmp1
  • Mmp10
  • Mmp11
  • Mmp13
  • Mmp14
  • Mmp15
  • Mmp16
  • Mmp17
  • Mmp1a
  • Mmp2
  • Mmp24
  • Mmp25
  • Mmp3
  • Mmp7
  • Mmp8
  • Mmp9
  • Mt5mmp
  • Mtmmp
  • Ngfg
  • Pcsk3
  • Pk
  • Plg
  • Prss1
  • Prss2
  • Prss2l1
  • Prss3
  • Spock3
  • Timp-1
  • Timp-2
  • Timp1
  • Timp2
  • Ton
  • Tpsb2
  • Trp1
  • Try1
  • Try10
  • Try2
  • Try4
  • Try5
  • Tryp1
Rattus norvegicus (Norway rat)
Activation of NF-kappaB in B cells
  • Bcl10
  • Btrc
  • Card11
  • Chuk
  • Cul1
  • Fbxw11
  • Ikba
  • Ikbb
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Malt1
  • Mecl1
  • Mss1
  • Nemo
  • Nfkbia
  • Nfkbib
  • Nfkbie
  • Pkcb
  • Prkcb
  • Prkcb1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rela
  • Ring12
  • Rps27a
  • Skp1
  • Skp1a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Activation of Na-permeable kainate receptors
  • Glur5
  • Glur6
  • Grik1
  • Grik2
Rattus norvegicus (Norway rat)
Activation of PKB
  • Akt2
  • Nipk
  • Pdk1
  • Pdpk1
  • Them4
  • Trib3
Rattus norvegicus (Norway rat)
Activation of RAC1 downstream of NMDARs
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk1
  • Camkk1
  • Camkk2
Rattus norvegicus (Norway rat)
Activation of SMO
  • Adrbk1
  • Csnk1a1
  • Grk2
  • Smo
  • Smoh
Rattus norvegicus (Norway rat)
Activation of the AP-1 family of transcription factors
  • Atf2
  • Csbp1
  • Csbp2
  • Erk1
  • Erk2
  • Fos
  • Jnk1
  • Jnk2
  • Jnk3
  • Jun
  • Mapk
  • Mapk1
  • Mapk10
  • Mapk11
  • Mapk14
  • Mapk3
  • Mapk8
  • Mapk9
  • Prkm1
  • Prkm10
  • Prkm3
  • Prkm8
  • Prkm9
  • Rjg-9
Rattus norvegicus (Norway rat)
Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
  • Eif4a1
  • Eif4a2
  • Eif4e
  • Eif4ebp1
  • Eif4g1
Rattus norvegicus (Norway rat)
Activation of the phototransduction cascade
  • CNCG2
  • CNCG3L
  • CNCG4
  • Cncg
  • Cncg1
  • Cnga1
  • Cngb1
  • Gnat1
  • Gnb1
  • Gngt1
  • Pde6a
  • Pde6b
  • Pde6g
  • RCNC2
  • Rho
Rattus norvegicus (Norway rat)
Acyl chain remodeling of CL
  • Cpla2
  • Hadha
  • Hadhb
  • Lclat1
  • Pla2g4
  • Pla2g4a
  • TAZ
  • Tafazzin
Rattus norvegicus (Norway rat)
Acyl chain remodeling of DAG and TAG
  • Atgl
  • Awat2
  • Dgat
  • Dgat1
  • Dgat2
  • Dgat2l6
  • Mgl2
  • Mgll
  • Pnpla2
  • Pnpla3
Rattus norvegicus (Norway rat)
Acyl chain remodelling of PC
  • Aytl1
  • Aytl1a
  • Aytl2
  • Cpla2
  • Grcc3f
  • H-rev107
  • Hrasls3
  • Hrev107
  • Lpcat1
  • Lpcat2
  • Lpcat2a
  • Lpcat3
  • Lpcat4
  • Mboat2
  • Mboat5
  • Oact2
  • Oact5
  • Phlpb
  • Pla2g10
  • Pla2g12a
  • Pla2g16
  • Pla2g1b
  • Pla2g2a
  • Pla2g2d
  • Pla2g2f
  • Pla2g3
  • Pla2g4
  • Pla2g4a
  • Pla2g4b
  • Pla2g4c
  • Pla2g4d
  • Pla2g4e
  • Pla2g4f
  • Pla2g5
  • Pla2g6
  • Pla2r1
  • Plaat3
  • Plb1
  • Plbd1
  • Pnpla8
  • Pnpla9
  • Rlp-3
  • Tmem86b
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024