GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 176 - 200 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Cellular response to hypoxia
  • Epas1
  • Hif1a
  • Hif1an
  • Hif2a
Rattus norvegicus (Norway rat)
Glycerophospholipid catabolism
  • Enpp6
  • Gde1
  • Mir16
  • Pnpla6
Rattus norvegicus (Norway rat)
Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
  • Eif4a1
  • Eif4a2
  • Eif4e
  • Eif4ebp1
  • Eif4g1
Rattus norvegicus (Norway rat)
PERK regulates gene expression
  • Eif2a
  • Eif2ak3
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Pek
  • Perk
Rattus norvegicus (Norway rat)
Laminin interactions
  • Egfl3
  • ITGA3B
  • Itga3
  • Itga6
  • Itga7
  • Itgb1
  • Itgb4
  • Lama4
  • Megf6
  • Nid2
Rattus norvegicus (Norway rat)
MET activates PTK2 signaling
  • Egfl3
  • Fak
  • Fak1
  • Hgf
  • ITGA3B
  • Itga2
  • Itga3
  • Itgb1
  • Lama4
  • Megf6
  • Met
  • Ptk2
  • Src
Rattus norvegicus (Norway rat)
EPH-Ephrin signaling
  • Efna1
  • Efna2
  • Efna3
  • Efna4
  • Efna5
  • Efnb1
  • Efnb3
  • Ehk-1
  • Ehk-2
  • Ehk-3
  • Ehk2
  • Ehk3
  • Ekh1
  • Elk
  • Epgl1
  • Epha1
  • Epha10
  • Epha2
  • Epha3
  • Epha4
  • Epha5
  • Epha6
  • Epha7
  • Ephb1
  • Ephb2
  • Ephb3
  • Ephb4
  • Ephb6
  • Eplg2
  • Eplg7
  • Epth2
  • LOC686310
  • Lerk1
  • Lerk2
  • Lerk7
  • Rek4
  • Rek7
  • Tyro4
Rattus norvegicus (Norway rat)
Peptide chain elongation
  • Eef2
Rattus norvegicus (Norway rat)
HSF1 activation
  • Eef1a
  • Eef1a1
  • Hsf1
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspc3
  • Hspca
  • Hspcb
  • Ptges3
  • Tebp
  • Vcp
  • Ywhae
Rattus norvegicus (Norway rat)
Eukaryotic Translation Elongation
  • Eef1a
  • Eef1a1
  • Eef1b2
  • Eef1d
  • Eef1g
Rattus norvegicus (Norway rat)
Toll Like Receptor 9 (TLR9) Cascade
  • Eea1
  • Pik3c3
  • Pik3r4
  • Rbsn
  • Tlr9
  • Vps34
  • Zfyve20
Rattus norvegicus (Norway rat)
Lysosphingolipid and LPA receptors
  • Edg1
  • Edg2
  • Edg5
  • Edg7
  • Edg8
  • Gpcr91
  • Lpa1
  • Lpa3
  • Lpar1
  • Lpar2
  • Lpar3
  • Lpar5
  • Lppr1
  • Lppr2
  • Lppr3
  • Lppr4
  • Nrg1
  • Php1
  • Plppr1
  • Plppr2
  • Plppr3
  • Plppr4
  • Plppr5
  • Prg1
  • Prg2
  • Prg3
  • Prg4
  • S1pr1
  • S1pr2
  • S1pr3
  • S1pr4
  • S1pr5
Rattus norvegicus (Norway rat)
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
  • Ecsit
  • Map3k1
  • Mekk
  • Mekk1
  • Traf6
Rattus norvegicus (Norway rat)
MyD88 cascade initiated on plasma membrane
  • Ecsit
  • Map3k1
  • Mekk
  • Mekk1
  • Traf6
Rattus norvegicus (Norway rat)
MyD88:MAL(TIRAP) cascade initiated on plasma membrane
  • Ecsit
  • Map3k1
  • Mekk
  • Mekk1
  • Tirap
  • Traf6
Rattus norvegicus (Norway rat)
JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1
  • ENSRNOG00000067007
  • Ikbkg
  • Irak1
  • Irak2
  • Jnk1
  • Jnk2
  • Jnk3
  • Map2k4
  • Map2k7
  • Map3k7
  • Map3k7ip2
  • Mapk10
  • Mapk8
  • Mapk9
  • Nemo
  • Nod1
  • Nod2
  • Prkm10
  • Prkm8
  • Prkm9
  • Ripk2
  • Tab1
  • Tab2
  • Tab3
  • Traf6
Rattus norvegicus (Norway rat)
Regulation of IFNA/IFNB signaling
  • ENSRNOG00000065554
  • If1ai1
  • If1ai2
  • If1ai3
  • Ifna1
  • Ifna12l
  • Ifna4
  • Ifna4l1
  • Ifnar1
  • Ifnar2
  • Ifnb
  • Ifnb1
  • Jak1
  • LOC100911527
  • LOC120103158
  • LOC120103159
  • LOC120103160
  • LOC120103161
  • LOC120103162
  • LOC120103163
  • LOC120103164
  • Ptph6
  • Ptpn1
  • Ptpn11
  • Ptpn6
  • RGD1560539
  • Stat1
  • Stat2
  • Stat4
  • Tyk2
  • Usp18
Rattus norvegicus (Norway rat)
PRPP biosynthesis
  • ENSRNOG00000063771
  • LOC314140
  • Prps1
  • Prps1l1
  • Prps1l3
  • Prps2
Rattus norvegicus (Norway rat)
SIRT1 negatively regulates rRNA expression
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Rrp8
  • Sirt1
  • Suv39h1
  • Th2b
Rattus norvegicus (Norway rat)
NoRC negatively regulates rRNA expression
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Mbd2
  • Th2b
Rattus norvegicus (Norway rat)
Assembly of the ORC complex at the origin of replication
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Kpna1
  • Kpna6
  • Kpnb1
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Orc1
  • Orc1l
  • Orc2
  • Orc2l
  • Orc3
  • Orc3l
  • Orc4
  • Orc4l
  • Orc5
  • Orc6
  • Th2b
Rattus norvegicus (Norway rat)
RNA Polymerase I Promoter Opening
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Erk1
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Mapk3
  • Mbd2
  • Prkm3
  • Tcfubf
  • Th2b
  • Ubf-1
  • Ubtf
Rattus norvegicus (Norway rat)
Asymmetric localization of PCP proteins
  • Dvl2
  • Fzd1
  • Fzd2
  • Fzd3
  • Fzd4
  • Fzd5
  • Fzd7
  • Fzd8
  • LOC100360645
  • LOC100360846
  • LOC100361515
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Par-6a
  • Par6a
  • Pard6a
  • Prickle1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rilp
  • Ring12
  • Rps27a
  • Smurf1
  • Smurf2
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Wnt-5a
  • Wnt5a
Rattus norvegicus (Norway rat)
PTK6 promotes HIF1A stabilization
  • Dtr
  • Egfr
  • Gpnmb
  • Hbegf
  • Hegfl
  • Hif1a
  • Lrrk2
  • Ptk6
Rattus norvegicus (Norway rat)
Transport and synthesis of PAPS
  • Dtdst
  • Papss1
  • Papss2
  • Sat1
  • Slc26a1
  • Slc26a2
  • Slc35b2
  • Slc35b3
Rattus norvegicus (Norway rat)

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Supported by JST NBDC Grant Number JPMJND2204

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