GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **51 - 75** of **250** in total

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Pathway Name ▲	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
DNA replication initiation	DNA polymerase alpha catalytic subunit A DNA polymerase alpha subunit B DNA polymerase epsilon catalytic subunit A DNA polymerase epsilon subunit B DNA polymerase epsilon subunit C DNA polymerase epsilon subunit D DNA primase large subunit DNA primase small subunit Protein DLS1	P10363 P13382 P20457 P21951 P24482 P27344 P38121 P40366 Q04603	CDC17 DLS1 DPB2 DPB3 DPB4 DUN2 POL1 POL12 POL2 PRI1 PRI2	Saccharomyces cerevisiae (brewer's yeast)
Deadenylation of mRNA	ATP-dependent RNA helicase FAL1 ATP-dependent RNA helicase eIF4A Eukaryotic initiation factor 4F subunit p150 Eukaryotic translation initiation factor 4B Eukaryotic translation initiation factor 4E Nucleolar protein 13 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 PAN2-PAN3 deadenylation complex subunit PAN3 Protein PES4	P07260 P10081 P34167 P36102 P39684 P39935 P53010 P53883 Q12099	CDC33 ECM35 FAL1 NOP13 PAN2 PAN3 PES4 STM1 TIF1 TIF2 TIF3 TIF41A TIF41B TIF42 TIF45 TIF4631	Saccharomyces cerevisiae (brewer's yeast)
Dectin-1 mediated noncanonical NF-kB signaling	Serine/threonine-protein kinase BCK1/SLK1/SSP31	Q01389	BCK1 LAS3 SLK1 SSP31	Saccharomyces cerevisiae (brewer's yeast)
Detoxification of Reactive Oxygen Species	Cytochrome c isoform 1 Cytochrome c isoform 2 Glutathione reductase Peroxiredoxin AHP1 Peroxiredoxin TSA1 Peroxiredoxin TSA2 Peroxisomal catalase A Probable ferric reductase transmembrane component 8 Probable metalloreductase AIM14 Superoxide dismutase 1 copper chaperone Superoxide dismutase [Cu-Zn] Superoxide dismutase [Mn], mitochondrial Thioredoxin-1 Thioredoxin-2 Thioredoxin-3, mitochondrial	P00044 P00045 P00445 P00447 P15202 P22217 P22803 P25372 P34760 P38013 P40202 P41921 P53109 Q04120 Q12209	AHP1 AIM14 CCS1 CTA1 CYC1 CYC7 CYP3 FRE8 GLR1 LYS7 SOD1 SOD2 TPX1 TRX1 TRX2 TRX3 TSA TSA1 TSA2 ZRG14	Saccharomyces cerevisiae (brewer's yeast)
Digestion of dietary carbohydrate	Sporulation-specific chitinase 2	Q06350	CTS2	Saccharomyces cerevisiae (brewer's yeast)	G80384UV
E3 ubiquitin ligases ubiquitinate target proteins	Peroxisomal membrane protein PEX13 Peroxisomal membrane protein PEX14 Peroxisomal targeting signal receptor Peroxisome assembly protein 12 Peroxisome biogenesis factor 10 Polyubiquitin Postreplication repair E3 ubiquitin-protein ligase RAD18 Proliferating cell nuclear antigen Ubiquitin-conjugating enzyme E2 13 Ubiquitin-conjugating enzyme E2 2 Ubiquitin-conjugating enzyme E2 4 Ubiquitin-conjugating enzyme E2-16 kDa Ubiquitin-conjugating enzyme variant MMS2 Uncharacterized ATP-dependent helicase IRC20	P06104 P0CG63 P10862 P15731 P15732 P15873 P35056 P52490 P53112 P53152 P80667 Q04370 Q05568 Q06554	IRC20 MMS2 PAS10 PAS20 PAS4 PEX10 PEX12 PEX13 PEX14 PEX5 POL30 RAD18 RAD6 SCD2 UBC13 UBC2 UBC4 UBC5 UBI4	Saccharomyces cerevisiae (brewer's yeast)
ERK/MAPK targets	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase HOG1 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Protein phosphatase PP2A regulatory subunit A Serine/threonine-protein kinase YPK3 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform Serine/threonine-protein phosphatase PP2A-1 catalytic subunit Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P23594 P31383 P32485 P38070 P38903 P41808 Q00772	DAC2 FUS3 HOG1 KSS1 MPK1 PPH21 RTS1 SCS1 SLT2 SMK1 SSK3 TPD3 YPK3	Saccharomyces cerevisiae (brewer's yeast)
ERKs are inactivated	Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Protein phosphatase PP2A regulatory subunit A Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform Serine/threonine-protein phosphatase PP2A-1 catalytic subunit Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P23594 P31383 P38903 P41808 Q00772	DAC2 FUS3 KSS1 MPK1 PPH21 RTS1 SCS1 SLT2 SMK1 TPD3	Saccharomyces cerevisiae (brewer's yeast)
Energy dependent regulation of mTOR by LKB1-AMPK	5'-AMP-activated protein kinase subunit gamma Carbon catabolite-derepressing protein kinase Cruciform DNA-recognizing protein 1 Fatty acyl-CoA synthetase and RNA processing-associated kinase 1 SNF1 protein kinase subunit beta-1 SNF1 protein kinase subunit beta-2 SNF1 protein kinase subunit beta-3 Serine/threonine protein kinase KIN1 Serine/threonine-protein kinase KIN2 Serine/threonine-protein kinase KIN4 Signal transduction protein MDG1	P06782 P12904 P13185 P13186 P32578 P34164 P38845 P53885 Q01919 Q03002 Q04739	CAT1 CAT3 CCR1 CRP1 FRK1 GAL83 GLC2 KIN1 KIN2 KIN3 KIN31 KIN4 MDG1 PAS14 SCI1 SIP1 SIP2 SNF1 SNF4 SPM1 SPM2	Saccharomyces cerevisiae (brewer's yeast)
Estrogen-dependent gene expression	ATP-dependent RNA helicase DBP2 CTD kinase subunit alpha CTD kinase subunit beta DNA damage-responsive transcriptional repressor RPH1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Fork head protein homolog 1 Forkhead transcription factor HCM1 Histone H2A.1 Histone H2A.2 Histone H2A.Z Histone H2B.1 Histone H2B.2 Histone H3-like centromeric protein CSE4 Histone H3 Histone H4 Histone acetyltransferase ESA1 Histone acetyltransferase GCN5 Histone deacetylase RPD3 Nitrogen regulatory protein DAL80 Nitrogen regulatory protein GLN3 Polyamine oxidase FMS1 Protein BUR2 Protein GZF3 Protein arginine N-methyltransferase 1 TATA-box-binding protein Transcription initiation factor IIA large subunit Transcription initiation factor IIA subunit 2 Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta Transcriptional activator/repressor GIS1 Transcriptional regulator NRG1 Transcriptional regulatory protein GAT1	P02293 P02294 P02309 P04050 P04911 P04912 P08518 P13393 P16370 P18494 P20433 P20434 P20435 P20436 P22139 P24783 P25364 P26343 P27999 P32561 P32773 P32774 P34087 P36012 P38074 P38902 P39956 P40422 P40466 P41895 P41896 P42944 P43574 P46962 P50264 P61830 Q03125 Q03330 Q03833 Q03957 Q05949 Q08649 Q12692	ADA4 BTF1 BUR2 CSE4 CSL2 CST4 CTK1 CTK2 DAL80 DBP2 ESA1 FKH1 FMS1 GAT1 GCN5 GIS1 GLN3 GZF3 H2A1 H2A2 H2AZ H2B1 H2B2 HCM1 HHF1 HHF2 HHT1 HHT2 HMT1 HTA1 HTA2 HTA3 HTB1 HTB2 HTZ1 MOF6 MSS1 NRG1 ODP1 REC3 RMT1 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPD3 RPH1 RPO21 RPO22 RPO26 SDI2 SDS6 SIN2 SPT11 SPT12 SPT15 SSU71 SUA8 SWI9 TBP1 TFG1 TFG2 TOA1 TOA2 UGA43	Saccharomyces cerevisiae (brewer's yeast)
Eukaryotic Translation Termination	Eukaryotic peptide chain release factor GTP-binding subunit Eukaryotic peptide chain release factor subunit 1 Multifunctional methyltransferase subunit TRM112 eRF1 methyltransferase catalytic subunit MTQ2	P05453 P12385 P53738 Q03920	GST1 MTC6 MTQ2 PNM2 SAL3 SAL4 SUF12 SUP1 SUP2 SUP35 SUP45 TRM112	Saccharomyces cerevisiae (brewer's yeast)
Factors involved in megakaryocyte development and platelet production	Bud site selection protein RAX1 Cell division control protein 42 DOCK-like protein 1 F-actin-capping protein subunit alpha F-actin-capping protein subunit beta GTP-binding protein YPT10 GTP-binding protein YPT52 GTP Mitofusin FZO1 Vacuolar protein sorting-associated protein 45 Vacuolar segregation protein PEP7 cAMP-dependent protein kinase regulatory subunit cAMP-dependent protein kinase type 1 cAMP-dependent protein kinase type 2 cAMP-dependent protein kinase type 3	P05986 P06244 P06245 P07278 P13517 P19073 P26364 P28495 P32609 P36018 P38146 P38297 P38932 Q06409 Q08760	ADK2 AKY3 BCY1 CAP1 CAP2 CDC42 DCK1 FZO1 PAK3 PEP7 PKA1 PKA2 PKA3 RAX1 REG1 SRA1 SRA3 SRO2 STT10 TPK1 TPK2 TPK3 VAC1 VPL21 VPL28 VPS19 VPS45 VPT19 YKR1 YPT10 YPT52	Saccharomyces cerevisiae (brewer's yeast)
Fatty acyl-CoA biosynthesis	3-oxoacyl-[acyl-carrier-protein] reductase Acetyl-CoA carboxylase Acyl-CoA desaturase 1 Very long-chain fatty acid transport protein	P21147 P35731 P38225 Q00955	ABP2 ACC1 FAS3 FAT1 MTR7 OAR1 OLE1	Saccharomyces cerevisiae (brewer's yeast)
Formation of the Early Elongation Complex	Cyclin CCL1 DNA-directed RNA polymerase II subunit RPB11 DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2 General transcription and DNA repair factor IIH subunit SSL1 General transcription and DNA repair factor IIH subunit TFB1 General transcription and DNA repair factor IIH subunit TFB2 General transcription and DNA repair factor IIH subunit TFB4 General transcription and DNA repair factor IIH subunit TFB5 Nuclear cap-binding protein complex subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II subunit A C-terminal domain phosphatase RNA polymerase II transcription factor B subunit 3 Serine/threonine-protein kinase KIN28 Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription initiation factor IIF subunit alpha Transcription initiation factor IIF subunit beta	P04050 P06242 P06839 P08518 P16370 P20433 P20434 P20435 P20436 P22139 P27692 P27999 P32776 P32914 P34087 P34160 P37366 P38902 P40422 P41895 P41896 Q00578 Q02939 Q03254 Q03290 Q04673 Q08920 Q12004 Q3E7C1	CBC1 CBC2 CBP20 CBP80 CCL1 FCP1 GCR3 KIN28 LOM3 MUD13 RAD25 RAD3 REM1 RIG2 RPA7 RPB1 RPB10 RPB11 RPB12 RPB150 RPB2 RPB220 RPB3 RPB4 RPB5 RPB6 RPB7 RPB8 RPB9 RPC10 RPC9 RPO21 RPO22 RPO26 SAE1 SPT4 SPT5 SSL1 SSL2 SSU71 STO1 SUA8 SUT1 TFB1 TFB2 TFB3 TFB4 TFB5 TFG1 TFG2 UVS112	Saccharomyces cerevisiae (brewer's yeast)
Formation of the active cofactor, UDP-glucuronate	UTP--glucose-1-phosphate uridylyltransferase	P32861	UGP1	Saccharomyces cerevisiae (brewer's yeast)
Formation of the ternary complex, and subsequently, the 43S complex	Eukaryotic translation initiation factor 1A Eukaryotic translation initiation factor 2 subunit alpha Eukaryotic translation initiation factor 2 subunit beta Eukaryotic translation initiation factor 2 subunit gamma Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit G Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Small ribosomal subunit protein eS10A Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17A Small ribosomal subunit protein eS17B Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1B Small ribosomal subunit protein eS21B Small ribosomal subunit protein eS24A Small ribosomal subunit protein eS24B Small ribosomal subunit protein eS25A Small ribosomal subunit protein eS26A Small ribosomal subunit protein eS27A Small ribosomal subunit protein eS27B Small ribosomal subunit protein eS28B Small ribosomal subunit protein eS4A Small ribosomal subunit protein eS4B Small ribosomal subunit protein eS6A Small ribosomal subunit protein eS6B Small ribosomal subunit protein eS7A Small ribosomal subunit protein eS8A Small ribosomal subunit protein eS8B Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11B Small ribosomal subunit protein uS12A Small ribosomal subunit protein uS12B Small ribosomal subunit protein uS13A Small ribosomal subunit protein uS13B Small ribosomal subunit protein uS14A Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17A Small ribosomal subunit protein uS17B Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2A Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4A Small ribosomal subunit protein uS4B Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9A Small ribosomal subunit protein uS9B Ubiquitin-ribosomal protein eS31 fusion protein	O13516 P02407 P05750 P05755 P05756 P05759 P06103 P07280 P09064 P0C0W1 P0C0X0 P0CX29 P0CX30 P0CX31 P0CX32 P0CX35 P0CX36 P0CX37 P0CX38 P0CX39 P0CX40 P0CX47 P0CX48 P0CX51 P0CX52 P0CX55 P0CX56 P14127 P20459 P23248 P25443 P26783 P26786 P32481 P32497 P32905 P35997 P38249 P38701 P38711 P38912 P39516 P39938 P40217 P41057 P46784 P48589 Q01855 Q04067 Q05775 Q08745 Q3E754 Q3E792	CDC63 CRY2 GCD11 HCR1 NAB1 NAB1A NIP1 PLC2 PRT1 RP51A RP51B RP55A RP61R RPG1 RPS0A RPS101 RPS102 RPS10A RPS10B RPS11A RPS11B RPS12 RPS13 RPS13A RPS13B RPS13C RPS14A RPS14B RPS15 RPS16A RPS16AA RPS16B RPS17A RPS17B RPS18A RPS18B RPS19A RPS1B RPS2 RPS20 RPS21 RPS21B RPS22A RPS23A RPS23B RPS24 RPS24A RPS24B RPS24EA RPS24EB RPS25A RPS25B RPS26 RPS26A RPS26B RPS27A RPS27B RPS28A RPS28B RPS29A RPS3 RPS30 RPS31 RPS31A RPS33B RPS36A RPS37 RPS4 RPS4A RPS4B RPS5 RPS6A RPS6B RPS7A RPS7B RPS8A RPS8B RPS9A RPS9B SUF14 SUI2 SUI3 SUI4 SUP38 SUP44 SUP46 TIF11 TIF211 TIF212 TIF213 TIF32 TIF34 TIF35 UBI3 URP2 YS11A YS29A YST1	Saccharomyces cerevisiae (brewer's yeast)
Fructose biosynthesis	D-arabinose dehydrogenase [NAD(P)+] heavy chain Sorbitol dehydrogenase 1 Sorbitol dehydrogenase 2	P35497 P38115 Q07786	ARA1 SDH1 SOR1 SOR2	Saccharomyces cerevisiae (brewer's yeast)	G58161NS
G alpha (12/13) signalling events	Actin cytoskeleton-regulatory complex protein END3 Actin cytoskeleton-regulatory complex protein PAN1 EH domain-containing and endocytosis protein 1 GTP-binding protein RHO1 GTP-binding protein RHO2 GTP-binding protein RHO3 GTP-binding protein RHO4 Guanine nucleotide-binding protein alpha-1 subunit Increased rDNA silencing protein 4 Nuclear fusion protein FUS2	P06780 P06781 P08539 P32521 P34216 P36115 P39013 Q00245 Q00246 Q05670	BUD15 CDC70 DAC1 DIM2 EDE1 END3 FUS2 GPA1 IRS4 MDP3 MIP3 PAN1 RHO1 RHO2 RHO3 RHO4 SCG1	Saccharomyces cerevisiae (brewer's yeast)
G alpha (i) signalling events	Guanine nucleotide-binding protein alpha-2 subunit Protein SST2 Regulator of G-protein signaling 2	P10823 P11972 Q99188	GPA2 RGS2 SSP101 SST2	Saccharomyces cerevisiae (brewer's yeast)
Galactose catabolism	Bifunctional protein GAL10 Phosphoglucomutase 1 Phosphoglucomutase 2	P04397 P33401 P37012	GA-5 GAL10 GAL5 PGM1 PGM2	Saccharomyces cerevisiae (brewer's yeast)
Glucagon-like Peptide-1 (GLP1) regulates insulin secretion	Bud site selection protein 5 Cell division control protein 25 Guanine nucleotide exchange factor LTE1 Ras-related protein RSR1	P04821 P07866 P13856 P25300	BUD1 BUD5 CDC25 CTN1 EIS4 LTE1 MSI2 RSR1	Saccharomyces cerevisiae (brewer's yeast)
Glutathione conjugation	D-arabinose dehydrogenase [NAD(P)+] heavy chain NADPH-dependent alpha-keto amide reductase S-formylglutathione hydrolase Uncharacterized oxidoreductase YJR096W	P38115 P40363 P47137 Q07551	ARA1 YDL124W YJL068C YJR096W	Saccharomyces cerevisiae (brewer's yeast)
Glutathione synthesis and recycling	5-oxoprolinase Cys-Gly metallodipeptidase DUG1 Glutathione hydrolase proenzyme Glutathione synthetase GSH2 Glutathione-specific gamma-glutamylcyclotransferase	P28273 P32656 P43616 Q05902 Q08220	CIS2 DUG1 ECM38 GCG1 GSH2 OXP1	Saccharomyces cerevisiae (brewer's yeast)
Glycerophospholipid biosynthesis	Mitochondrial import inner membrane translocase subunit TIM54 Sphingoid long chain base kinase 4 Sphingoid long chain base kinase 5	P47045 Q06147 Q12246	LCB4 LCB5 TIM54	Saccharomyces cerevisiae (brewer's yeast)
Glycerophospholipid catabolism	Ectonucleotide pyrophosphatase/phosphodiesterase 1 Ectonucleotide pyrophosphatase/phosphodiesterase 2 Lysophospholipase NTE1	P25353 P39997 Q04958	NPP1 NPP2 NTE1	Saccharomyces cerevisiae (brewer's yeast)

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