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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
G39213VZ
Summary
- GlyTouCan ID
-
G39213VZ
- IUPAC Condensed
- GlcNAc(b1-2)Man(a1-3)[GlcNAc(b1-2)Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan complex
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1316.49
External Links
- GlyConnect structure
- GlyGen
- GlycoChemExplorer
- JCGGDB AIST
- KEGG GLYCAN
- UniCarbKB
- GlycoStore
- ChEBI
- PubChem Compound
- PubChem Substance
3D Structures
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Homo sapiens (human) | |
| Rattus norvegicus (Norway rat) | |
| Viruses | |
| Gallus gallus (chicken) |
Taxonomic Hierarchy
- Viruses
root
cellular organisms [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| FUT10 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| FUT11 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| MGAT3 | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G59471TH
|
Asn-X | |
| MGAT4A | UDP-GlcNAc |
G39213VZ
|
PA |
G29011JC
|
PA | |
| MGAT5 | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G10219AA
|
Asn-X |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| FUT10 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| FUT8 | GDP-Fuc |
G39213VZ
|
Free |
G80858MF
|
Free | |
| FUT11 | GDP-Fuc |
G39213VZ
|
R |
G64669AQ
|
R | |
| MGAT5 | UDP-GlcNAc |
G39213VZ
|
[beta]1-Asn |
G10219AA
|
[beta]1-Asn | |
| MGAT3 | UDP-GlcNAc |
G39213VZ
|
Asn-X |
G59471TH
|
Asn-X |
KEGG BRITE Database
G88380UG
G93351GM
G61751GZ
GALAXY
Glucose Units
- ODS
- 8.8999996185302734375
- Amide
- 5.0999999046325683594
- Degrading Enzymes
G06063MN
G15403HX
G22768VO
G30817UY
G36191CD
Glycans containing this structure in GALAXY
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P02771 | Alpha-fetoprotein | ||
| P05540 | T-cell surface glycoprotein CD4 | ||
| P07602 | Prosaposin | ||
| P08637 | Low affinity immunoglobulin gamma Fc region receptor III-A | ||
| P0DTC2 | Spike glycoprotein | ||
| P10252 | CD48 antigen | ||
| P12314 | High affinity immunoglobulin gamma Fc receptor I | ||
| P12318 | Low affinity immunoglobulin gamma Fc region receptor II-a | ||
| P13987 | CD59 glycoprotein | ||
| P29965 | CD40 ligand |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(2+1)10d 10:10d(2+1)11n
- WURCS
- WURCS=2.0/3,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-1-3-1/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1
