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G84224TW

Summary

GlyTouCan ID: G84224TW
IUPAC Condensed: Gal(b1-4)Glc(b1-
Motifs: Lactosylceramide
Subsumption Level: Fully-defined saccharide
Monoisotopic Mass: 342.12

External Links

BCSDB

26959
136652

GlyGen

G84224TW

GlycoChemExplorer

JCGG-M0000000380

GlycoEpitope

EP0078

JCGGDB AIST

JCGG-STR001961

KEGG GLYCAN

G00092

SugarBindDB

3

UniCarbKB

4019

ChEBI

36218

PubChem Compound

6134

PubChem Substance

252287609

The Human Metabolome Database

HMDB0041627

3D Structures

GlycoNAVI: G84224TW
GLYCAM: DGalpb1-4DGlcpb1-OH

Organisms

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Organisms	Evidence
Salmonella	GlyTouCan(bcsdb)

Taxonomic Hierarchy

cellular organisms [inference]

Bacteria (eubacteria) [inference]

Pseudomonadota [inference]

Gammaproteobacteria [inference]

Enterobacterales [inference]

Enterobacteriaceae [inference]

Klebsiella/Raoultella group [inference]

Klebsiella [inference]

unclassified Klebsiella [inference]

Klebsiella sp.

Shigella [inference]

Shigella flexneri

Salmonella

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Echinodermata (echinoderms) [inference]

Eleutherozoa [inference]

Asterozoa [inference]

Asteroidea (starfishes)

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Discoba [inference]

Euglenozoa [inference]

Kinetoplastea (kinetoplasts) [inference]

Metakinetoplastina [inference]

Trypanosomatida [inference]

Trypanosomatidae [inference]

Leishmaniinae [inference]

Leishmania [inference]

Leishmania [inference]

Leishmania mexicana species complex [inference]

Leishmania amazonensis

GlycoGene Database (GGDB)

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B4GALT5	(not applicable)	G71142DF	Ceramide	G84224TW	Ceramide	9435216
ST3GAL5	CMP-Neu5Ac	G84224TW	ceramide	G91237TK	ceramide	9822625
FUT5	GDP-Fuc	G84224TW	R	G57548NB	R	8780523
A4GALT	UDP-Gal	G84224TW	Cer	G00059MO	Cer	10747952
B4GALT6	UDP-Gal	G71142DF	Cer	G84224TW	Cer	9593693

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
B3GNT2	UDP-GlcNAc	G84224TW	PA	G06239NA	PA	11042166
B3GNT2	UDP-GlcNAc	G84224TW		G06239NA		9892646
B3GNT2	UDP-GlcNAc	G84224TW	[beta]1-OBn	G06239NA	[beta]1-OBn	9892646
A4GNT	UDP-GlcNAc	G84224TW	[beta]pNP	G37329VY	[beta]pNP	10430883
B3GNT4	UDP-GlcNAc	G84224TW		G06239NA		11042166

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Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
ST8SIA3	CMP-Neu5Ac	G84224TW	Cer	7782326
ST3GAL1	CMP-Neu5Ac	G84224TW	free	8288606
ST6GAL1	CMP-Neu5Ac	G84224TW	ceramide	12235148
ST3GAL6	CMP-Neu5Ac	G84224TW	ceramide	10206952
ST8SIA6	CMP-Neu5Ac	G84224TW		11980897

KEGG BRITE Database

KEGG ID

G00092

Enzyme

References

Reactions

Displaying **all 7** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05937	2.4.3.9	G84224TW	G91237TK
R05960	2.4.1.228	G84224TW	G00059MO
R06276	2.4.1.274	G71142DF	G84224TW
R05961	3.2.1.22	G00059MO	G84224TW
R05971	2.4.1.206	G84224TW	G06239NA
R11320	2.4.1.87	G84224TW	G78074HX
R05938	2.4.1.92	G84224TW	G90562PB

GlycoEpitope

Epitope ID: EP0078
Epitope Name: Lactosylceramide

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2b:b-dgal-HEX-1:5
LIN
1:1o(4+1)2d

WURCS

WURCS=2.0/2,2,1/[a2122h-1b_1-5][a2112h-1b_1-5]/1-2/a4-b1

Literature (from GlyTouCan)

BCSDB

Roslund MU et al. Complete (1)H and (13)C NMR chemical shift assignments of mono-, di-, and trisaccharides as basis for NMR chemical shift predictions of polysaccharides using the computer program casper. Carbohydr Res. 2011 Aug 16;346:(11):1311-9. doi: 10.1016/j.carres.2011.04.033. PMID: 21621752.

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: December 9, 2024