PACDB provides the information on pathogens (e.g. bacteria, fungus, toxin and virus) adhering to carbohydrates expressed on the cell surface of host animals or plants.
Database | Last Updated |
---|---|
Pathogen Adherence to Carbohydrate Database (PACDB) | June 1, 2016 |
Species | Pathogen Adherence Molecule | Ligand Name | Ligand Feature | Target Source | Glycan Sequence ▲ | Binding | PubMed ID |
---|---|---|---|---|---|---|---|
Unknown
|
GM3(Neu4Ac5Gc)
|
Monosialoglycosphingolipids
|
Ac(-4)Neu5Gc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
GM3(Neu4Ac5Gc)
|
Monosialoglycosphingolipids
|
Ac(-4)Neu5Gc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
Unknown
|
GD3(Neu5Ac9Ac)
|
Disialoglycosphingolipids
|
Ac(-9)NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Binding
|
|||
Unknown
|
GD3(Neu5Ac9Ac)
|
Disialoglycosphingolipids
|
Ac(-9)NeuAc(a2-8)NeuAc(a2-3)Gal(b1-4)Glc(b1-1)Cer
|
Not Binding
|
|||
F1C
|
Ceramide
|
Non-glycosylated Lipids
|
Cer
|
Not Binding
|
|||
Unknown
|
Fucose
|
Monosaccharides
|
Respiratory tract
|
Fuc
|
Binding
|
||
RS-IIL (homologous to PA-IIL)
|
Fucose
|
Monosaccharides
|
Fuc
|
Binding
|
|||
PA-IIL
|
Fucosylamine
|
Monosaccharides
|
Fuc
|
Binding
|
|||
PA-IIL
|
L-Fucose
|
Monosaccharides
|
Fuc
|
Binding
|
|||
PA-IIL (47-kDa)
|
L-Fucose
|
Monosaccharides
|
Fuc
|
Binding
|
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01