GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 201 - 225 of 499 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
FGFR2 alternative splicing
  • R05D3.8
  • ama-1
  • cbp-20
  • cbp-80
  • gtf-2F1
  • gtf-2F2
  • gtf-2f1
  • gtf-2f2
  • hrp-1
  • ncbp-1
  • ncbp-2
  • ptb-1
  • rbp-1
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • sqd-1
Caenorhabditis elegans
Switching of origins to a post-replicative state
  • MCM7
  • let-358
  • lin-6
  • mcm-2
  • mcm-3
  • mcm-4
  • mcm-5
  • mcm-6
  • mcm-7
Caenorhabditis elegans
Regulation of PTEN gene transcription
  • CeTor
  • F13H10.3
  • daf-15
  • egl-43
  • let-363
  • lin-53
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mafr-1
  • mes-2
  • mes-6
  • mlst-8
  • raga-1
  • ragc-1
  • rba-1
  • rba-2
  • rheb-1
Caenorhabditis elegans
Amino acids regulate mTORC1
  • CeTor
  • F13H10.3
  • daf-15
  • flcn-1
  • fnip-2
  • fus-1
  • let-363
  • lmtr-2
  • lmtr-3
  • lmtr-5
  • mlst-8
  • raga-1
  • ragc-1
  • rdy-1
  • rheb-1
  • spe-5
  • unc-32
  • vha-10
  • vha-11
  • vha-12
  • vha-13
  • vha-14
  • vha-15
  • vha-16
  • vha-17
  • vha-2
  • vha-3
  • vha-4
  • vha-5
  • vha-6
  • vha-7
  • vha-8
  • vha-9
Caenorhabditis elegans
Serine biosynthesis
  • CELE_R11H6.2
  • CELE_Y57E12AL.1
  • CELE_Y62E10A.13
  • F26H9.5
  • phdh-1
  • serr-1
Caenorhabditis elegans
Vitamin C (ascorbate) metabolism
  • C02D5.4
  • C03B1.13
  • C35A11.4
  • C51E3.6
  • CELE_F11D5.5
  • CELE_F11D5.7
  • CELE_F13B12.2
  • CELE_F48E3.2
  • CELE_F53H8.3
  • CELE_K08F9.1
  • CELE_K08H10.6
  • CELE_K09C4.1
  • CELE_K09C4.4
  • CELE_K09C4.5
  • CELE_R11E3.2
  • CELE_T07G12.2
  • CELE_T07G12.4
  • CELE_T07G12.5
  • CELE_Y37A1A.3
  • CELE_Y39B6A.41
  • CELE_Y39E4B.5
  • CELE_Y59E9AL.4
  • CELE_ZK829.9
  • R09B5.11
  • cytb-5.1
  • fdgt-2
  • fgt-1
  • gst-44
  • gsto-1
  • gsto-2
  • gsto-3
  • slcf-2
Caenorhabditis elegans
CRMPs in Sema3A signaling
  • C44H4.6
  • R03D7.5
  • cdk-5
  • cdka-1
  • dhp-1
  • dhp-2
  • frk-1
  • gsk-3
  • mab-20
  • plx-1
  • sema-1a
  • sgg-1
  • smp-1
  • smp-2
  • src-1
  • unc-33
Caenorhabditis elegans
Cyclin E associated events during G1/S transition
  • akt-1
  • akt-2
  • cdc-25.1
  • cdc-25.2
  • cdc-25.3
  • cdc-25.4
  • cdk-2
  • cki-2
  • cye-1
Caenorhabditis elegans
Estrogen-dependent gene expression
  • ama-1
  • cdk-9
  • cit-1.1
  • cit-1.2
  • gtf-2F1
  • gtf-2F2
  • gtf-2f1
  • gtf-2f2
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
Caenorhabditis elegans
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription
  • ccnk-1
  • cdk-8
  • cdk-9
  • cem-3
  • cic-1
  • cit-1.1
  • cit-1.2
  • daf-8
  • dpl-1
  • efl-1
  • kpc-1
  • lin-35
  • mpk-1
  • sma-4
  • sur-1
  • tag-68
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • yap-1
Caenorhabditis elegans
VxPx cargo-targeting to cilium
  • CELE_F54C9.11
  • CELE_F57C9.6
  • che-6
  • cng-1
  • cng-2
  • cng-3
  • exoc-7
  • exoc-8
  • pdk-2
  • pkd-2
  • rab-11.1
  • rab-8
  • rab8
  • rabr-1
  • rfip-1
  • sec-10
  • sec-15
  • sec-3
  • sec-5
  • sec-6
  • sec-8
  • tax-2
  • tax-4
Caenorhabditis elegans
Downregulation of ERBB2 signaling
  • 1G758
  • CELE_F14B4.1
  • CELE_Y38H6C.20
  • cdc-37
  • chn-1
  • csk-1
  • cul-5
  • daf-21
  • kin-7
  • let-23
  • rme-2
  • rol-3
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
Regulation of RUNX1 Expression and Activity
  • bro-1
  • cyd-1
  • mab-2
  • nhl-2
  • nhl-3
  • rnt-1
  • run-1
  • tam-1
Caenorhabditis elegans
Transcriptional regulation by RUNX2
  • bro-1
  • cdk-1
  • cyb-1
  • cyb-2.1
  • cyb-2.2
  • mab-2
  • ncc-1
  • ppm-1.D
  • ppm-1.d
  • rnt-1
  • run-1
Caenorhabditis elegans
Proton-coupled monocarboxylate transport
  • mct-1
  • mct-2
  • mct-3
  • mct-4
  • mct-5
  • mct-6
  • rig-6
  • slcf-1
Caenorhabditis elegans
Collagen chain trimerization
  • C16E9.1
  • C18H7.1
  • C29A12.6
  • CELE_F31F7.2
  • CELE_K09E2.1
  • CELE_R193.2
  • CELE_T19D12.4
  • clb-2
  • cle-1
  • col-99
  • emb-9
Caenorhabditis elegans
Collagen degradation
  • C16E9.1
  • CELE_K03B8.6
  • clb-2
  • cle-1
  • emb-9
  • eppl-1
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
Integrin cell surface interactions
  • C05D9.3
  • C18E9.7
  • CELE_F59F5.3
  • clb-1
  • clb-2
  • ddr-2
  • emb-9
  • ina-1
  • kin-36
  • let-2
  • pat-2
  • pat-3
  • rig-5
  • rig-6
  • svh-4
  • ttn-1
Caenorhabditis elegans
Aryl hydrocarbon receptor signalling
  • aipr-1
  • daf-21
  • daf-41
  • p23
Caenorhabditis elegans
HSF1 activation
  • cdc-48.2
  • daf-21
  • daf-41
  • eft-3
  • eft-4
  • hda-10
  • hsf-1
  • p23
Caenorhabditis elegans
Regulation of TP53 Activity through Acetylation
  • B0025.4
  • akt-1
  • akt-2
  • chd-3
  • dcp-66
  • evl-11
  • hda-1
  • hda-3
  • let-418
  • lin-40
  • lin-49
  • lin-53
  • lsy-13
  • mys-4
  • nhl-2
  • nhl-3
  • rba-1
  • rba-2
  • tam-1
Caenorhabditis elegans
Transport of bile salts and organic acids, metal ions and amine compounds
  • CELE_Y71G10AR.4
  • cho-1
  • chtl-1
Caenorhabditis elegans
Synthesis of bile acids and bile salts
  • F35C8.5
  • obr-1
  • obr-2
  • obr-4
Caenorhabditis elegans
Endosomal Sorting Complex Required For Transport (ESCRT)
  • C01A2.4
  • CELE_R12C12.5
  • chmp-7
  • hgrs-1
  • mvb-12
  • pqn-19
  • spe-48
  • stam-1
  • tsg-101
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
  • vps-2
  • vps-20
  • vps-22
  • vps-24
  • vps-25
  • vps-28
  • vps-32.1
  • vps-36
  • vps-37
Caenorhabditis elegans
Sealing of the nuclear envelope (NE) by ESCRT-III
  • C01A2.4
  • CELE_R12C12.5
  • Y37H9A.3
  • chmp-7
  • istr-1
  • spas-1
  • vps-2
  • vps-20
  • vps-24
  • vps-32.1
  • vps-4
Caenorhabditis elegans

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024