GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **301 - 325** of **1070** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	Organism
Transport and synthesis of PAPS	3'-phosphoadenosine 5'-phosphosulfate synthase 1 3'-phosphoadenosine 5'-phosphosulfate synthase 2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 Adenosine 3'-phospho 5'-phosphosulfate transporter 2 Sulfate anion transporter 1 Sulfate transporter	A0A0G2K0L0 A0A0G2K950 D4AAG3 F7FLA1 O70531 P45380	Dtdst Papss1 Papss2 Sat1 Slc26a1 Slc26a2 Slc35b2 Slc35b3	Rattus norvegicus (Norway rat)
Acyl chain remodeling of CL	Cytosolic phospholipase A2 Lysocardiolipin acyltransferase 1 Tafazzin family protein Trifunctional enzyme subunit alpha, mitochondrial Trifunctional enzyme subunit beta, mitochondrial	A0A0G2K0X0 A0A8I6AFV0 P50393 Q60587 Q64428	Cpla2 Hadha Hadhb Lclat1 Pla2g4 Pla2g4a TAZ Tafazzin	Rattus norvegicus (Norway rat)
Formation of the beta-catenin:TCF transactivating complex	BCL9 like BCL9, transcription coactivator Catenin beta-1 Histone acetyltransferase KAT5 Histone deacetylase 1 Histone lysine acetyltransferase CREBBP Lymphoid enhancer-binding factor 1 Parafibromin Pygopus family PHD finger 1 Pygopus family PHD finger 2 RNA polymerase-associated protein LEO1 RuvB-like 1 TLE family member 1, transcriptional corepressor TLE family member 2, transcriptional corepressor Telomerase reverse transcriptase Transcription activator BRG1 Transcription factor 7 like 1 Transcription factor 7 like 2 Transcription factor 7 Transducin-like enhancer protein 3 Transducin-like enhancer protein 4 Transformation/transcription domain-associated protein histone acetyltransferase	A0A0G2K109 A0A8I5ZLY3 A0A8I5ZT78 A0A8I6A6Y0 A0A8I6A9A2 A0A8I6AA06 A0A8I6AT29 A0A8I6G641 A0A8I6GB32 A0A8I6GLC1 B5DFG8 P60123 Q07141 Q4QQW4 Q4V8C8 Q641X2 Q673L6 Q6JHU9 Q8K1P7 Q99MK2 Q9JIT3 Q9QXN1 Q9WU82	Baf190a Bcl9 Bcl9l Brg1 Catnb Cbp Cdc73 Crebbp Ctnnb1 Ep300 Esp2 Esp3 Grg4 Hdac1 Hrpt2 Htatip Kat5 Lef1 Leo1 Pygo1 Pygo2 Ruvbl1 Smarca4 Snf2b Snf2l4 Tcf7 Tcf7l1 Tcf7l2 Tert Tip49 Tip49a Tip60 Tip60b Tle1 Tle2 Tle3 Tle4 Trrap	Rattus norvegicus (Norway rat)
Repression of WNT target genes	C-terminal-binding protein 1 C-terminal-binding protein 2 Lymphoid enhancer-binding factor 1 TLE family member 1, transcriptional corepressor TLE family member 2, transcriptional corepressor Transcription factor 7 like 1 Transcription factor 7 like 2 Transcription factor 7 Transducin-like enhancer protein 3 Transducin-like enhancer protein 4	A0A0G2K109 A0A8I5ZLY3 A0A8I5ZT78 A0A8I6A9A2 A0A8I6AT29 Q07141 Q9EQH5 Q9JIT3 Q9QXN1 Q9Z2F5	Bars Ctbp1 Ctbp2 Ctbp3 Esp2 Esp3 Grg4 Lef1 Tcf7 Tcf7l1 Tcf7l2 Tle1 Tle2 Tle3 Tle4	Rattus norvegicus (Norway rat)
COPII-mediated vesicle transport	Alpha-1-antiproteinase Alpha-soluble NSF attachment protein Amphiregulin Ankyrin repeat domain 28 BET1 homolog Beta-soluble NSF attachment protein CD59 glycoprotein Casein kinase I isoform delta Cathepsin Z Coagulation factor VIII Collagen type VII alpha 1 chain Cornichon family AMPA receptor auxiliary protein 1 Dipeptidyl peptidase 1 Folate receptor alpha Gamma-soluble NSF attachment protein General vesicular transport factor p115 Glutamate receptor 1 Golgi SNAP receptor complex member 2 Golgi reassembly-stacking protein 1 Golgin subfamily A member 2 Guanine nucleotide-exchange factor SEC12 Lectin, mannose-binding 2 Multiple coagulation factor deficiency protein 2 homolog Protein ERGIC-53-like Protein ERGIC-53 Protein SEC13 homolog Protein cornichon homolog 2 Protein cornichon homolog 3 Protein phosphatase 6, regulatory subunit 3 Protein transport protein SEC23 Protein transport protein Sec16B Protein transport protein Sec31A Protein transport protein sec16 Protransforming growth factor alpha Ras-related protein Rab-1A Ras-related protein Rab-1B SEC22 homolog C, vesicle trafficking protein SEC23 interacting protein SEC24 homolog A, COPII coat complex component SEC24 homolog B, COPII coat complex component SEC24 homolog C, COPII coat complex component SEC24 homolog D, COPII coat complex component Sec1 family domain-containing protein 1 Serine/threonine-protein phosphatase 6 catalytic subunit Small COPII coat GTPase SAR1B Synaptobrevin homolog YKT6 Syntaxin-17 Syntaxin-5 Trafficking from ER to golgi regulator Trafficking protein particle complex 2 Trafficking protein particle complex subunit 10 Trafficking protein particle complex subunit 1 Trafficking protein particle complex subunit 2-like protein Trafficking protein particle complex subunit 3 Trafficking protein particle complex subunit 4 Trafficking protein particle complex subunit 5 Trafficking protein particle complex subunit 6A Trafficking protein particle complex subunit 6B Trafficking protein particle complex subunit 9 Trafficking protein particle complex subunit Transmembrane emp24 domain-containing protein 10 Transmembrane emp24 domain-containing protein 2 Vesicle-fusing ATPase Vesicle-trafficking protein SEC22a Vesicle-trafficking protein SEC22b	A0A0G2K112 A0A0G2K350 A0A0G2K626 A0A0G2K9K4 A0A8I5ZRE4 A0A8I5ZTA3 A0A8I6GHK6 B0BNE3 B2RYU6 B5DFC3 D0Q0Y7 D3ZE04 D3ZEB1 D3ZES2 D3ZW15 D3ZZA8 D4A3S0 E9PU02 F1MAH5 F1MAQ4 F7FPK8 G3V8M6 G3V8Q8 G3V9S9 M0R3S2 O35165 O35254 P01134 P10536 P17475 P19490 P24338 P27274 P41542 P54921 P80067 P85969 Q06486 Q08851 Q2KMM2 Q4KM74 Q5BJL8 Q5BJU5 Q5EGY4 Q5FB95 Q5HZY2 Q5U1Z2 Q5XFW8 Q62839 Q62896 Q62902 Q62991 Q63524 Q63584 Q642F4 Q64620 Q69BT7 Q6NYB7 Q75N33 Q8K5B3 Q9QUL6 Q9R1T3 Q9WTV0 Q9Z158 Q9Z2Q1	AABR07042915.1 Ankrd28 Areg Bet1 Cd59 Cnih1 Cnih2 Cnih3 Col7a1 Csnk1d Ctsc Ctsy Ctsz Erg1 Ergic53 Ergl F8 Folr1 GluA1 Glur1 Golga2 Gorasp1 Gosr2 Grasp65 Gria1 Gs27 Hckid LOC100909916 Lman1 Lman1l Lman2 Lztr2 Mcfd2 Napa Napb Napg Nsf Ppp6c Ppp6r3 Ppp6r3-ps1 Ppv Preb RGD1564492 Ra410 Rab1 Rab1A Rab1b Rgpr Rnp24 Saps3-ps1 Sar1b Sbdn Scfd1 Sdgf Sdnsf Sec12 Sec13 Sec13l1 Sec16a Sec16b Sec22a Sec22b Sec22c Sec22l1 Sec22l2 Sec23a Sec23ip Sec24a Sec24b Sec24c Sec24d Sec31a Sec31l1 Serpina1 Sly1 Snap Snapa Snapb Stx17 Stx5 Stx5a Stxbp1l2 Tfg Tgfa Tmed10 Tmed2 Tmp21 Trappc1 Trappc10 Trappc2 Trappc2l Trappc2ll1 Trappc3 Trappc4 Trappc5 Trappc6a Trappc6b Trappc9 Uso1 Vap1 Vdp Ykt6	Rattus norvegicus (Norway rat)
Activation of IRF3, IRF7 mediated by TBK1, IKKε (IKBKE)	Inhibitor of nuclear factor kappa B kinase subunit epsilon Interferon regulatory factor 3 Interferon regulatory factor 7 Lymphocyte antigen 96 Monocyte differentiation antigen CD14 NAD(+) hydrolase SARM1 Optineurin Polyubiquitin-B Polyubiquitin-C TANK-binding kinase 1 TIR domain containing adaptor molecule 2 TIR domain-containing adapter molecule 1 TNF receptor-associated factor TRAF family member-associated NFKB activator Toll-like receptor 4 Tyrosine-protein phosphatase non-receptor type 11 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2K130 A0A0G2K7X2 A0A8I6A5Y3 D3ZUM2 D3ZXR7 D4A5E7 D4A7D3 F7EXX5 M0RA08 P0CG51 P41499 P62982 Q3SWU2 Q56DL5 Q63429 Q63691 Q8R5M4 Q9QX05	Cd14 Ikbke Irf3 Irf7 LOC100360645 Ly96 Optn Plin3 Ptpn11 Rps27a Sarm1 Tank Tbk1 Ticam1 Ticam2 Tlr4 Traf3 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1	Rattus norvegicus (Norway rat)
Regulation of TBK1, IKKε (IKBKE)-mediated activation of IRF3, IRF7	Inhibitor of nuclear factor kappa B kinase subunit epsilon Lymphocyte antigen 96 Monocyte differentiation antigen CD14 Optineurin Polyubiquitin-B Polyubiquitin-C TANK-binding kinase 1 TIR domain containing adaptor molecule 2 TIR domain-containing adapter molecule 1 TNF receptor-associated factor TRAF family member-associated NFKB activator Toll-like receptor 4 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2K130 A0A0G2K7X2 A0A8I6A5Y3 D3ZXR7 D4A5E7 D4A7D3 M0RA08 P0CG51 P62982 Q56DL5 Q63429 Q63691 Q8R5M4 Q9QX05	Cd14 Ikbke LOC100360645 Ly96 Optn Plin3 Rps27a Tank Tbk1 Ticam1 Ticam2 Tlr4 Traf3 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1	Rattus norvegicus (Norway rat)
Postmitotic nuclear pore complex (NPC) reformation	AT hook containing transcription factor 1 GTP-binding nuclear protein Ran LOC683983 protein Nuclear envelope pore membrane protein POM 121 Nuclear pore complex protein Nup107 Nuclear pore complex protein Nup155 Nuclear pore complex protein Nup85 Nuclear pore complex protein Nup93 Nuclear pore complex protein Nup98-Nup96 Nucleoporin 133 Nucleoporin 160 Nucleoporin 205 Nucleoporin 37 Nucleoporin NDC1 Nucleoporin NUP188 Nucleoporin NUP35 Protein SEC13 homolog RAN GTPase activating protein 1 Regulator of chromosome condensation SUMO-conjugating enzyme UBC9 Small ubiquitin-related modifier 1	A0A0G2K160 A0A0G2K3M4 A0A0G2K5R3 A0A8I5ZJ67 A0A8I5ZU07 B0BNB5 D3Z8B2 D3ZBL6 F1LRC6 P37199 P49793 P52590 P52591 P62828 P63281 Q4QQS8 Q5I0H3 Q5XFW8 Q66HC5 Q68FY1 Q6AXN4	Ahctf1 LOC683983 Ndc1 Nup107 Nup121 Nup133 Nup155 Nup160 Nup188 Nup205 Nup35 Nup37 Nup43 Nup53 Nup85 Nup93 Nup98 Pcnt1 Pom121 Ran Rangap1 Rcc1 Sec13 Sec13l1 Sumo1 Tmem48 Ubce9 Ube2i	Rattus norvegicus (Norway rat)
Neurexins and neuroligins	Band 4.1-like protein 1 Band 4.1-like protein 5 Disks large homolog 2 Disks large homolog 3 Disks large homolog 4 Disks large-associated protein 1 Disks large-associated protein 2 Disks large-associated protein 3 Disks large-associated protein 4 Erythrocyte membrane protein band 4.1-like 2 Homer protein homolog 1 Homer protein homolog 2 Homer protein homolog 3 Leucine-rich repeat transmembrane neuronal protein 1 Leucine-rich repeat transmembrane neuronal protein 2 Leucine-rich repeat transmembrane neuronal protein 3 Leucine-rich repeat transmembrane neuronal protein 4 Metabotropic glutamate receptor 1 Metabotropic glutamate receptor 5 Neurexin-1 Neurexin-2 Neurexin-3 Neuroligin-1 Neuroligin-2 Neuroligin-3 Peripheral plasma membrane protein CASK Protein 4.1 SH3 and multiple ankyrin repeat domains protein 1 SH3 and multiple ankyrin repeat domains protein 3 Sorbin and SH3 domain-containing protein 2	A0A0G2K162 A0A8I5Y1T6 B4F7C5 D3ZAL8 D4A6D8 D4A7P2 O35413 O88801 P23385 P31016 P31424 P97836 P97837 P97838 P97839 Q07310 Q5FVG2 Q62765 Q62888 Q62889 Q62915 Q62936 Q63372 Q63374 Q63622 Q9JLU4 Q9WTP0 Q9WV48 Q9Z214 Q9Z2X5	Argbp2 Cask Dap2 Dap3 Dap4 Dlg2 Dlg3 Dlg4 Dlgap1 Dlgap2 Dlgap3 Dlgap4 Dlgh2 Dlgh3 Dlgh4 Epb4.1l1 Epb4.1l5 Epb41 Epb41l1 Epb41l2 Epb41l5 Gkap Gprc1a Gprc1e Grm1 Grm5 Homer Homer1 Homer2 Homer3 Lrrtm1 Lrrtm2 Lrrtm3 Lrrtm4 Mglur1 Mglur5 Nlgn1 Nlgn2 Nlgn3 Nrxn1 Nrxn2 Nrxn3 Prosap2 Psd95 Sapap4 Shank1 Shank3 Sorbs2 Vesl Vesl2 Vesl3	Rattus norvegicus (Norway rat)
Antigen Presentation: Folding, assembly and peptide loading of class I MHC	Antigen peptide transporter 1 Antigen peptide transporter 2 Beta-2-microglobulin Calnexin Calreticulin Endoplasmic reticulum aminopeptidase 1 Endoplasmic reticulum chaperone BiP HLA class I histocompatibility antigen, A-24 alpha chain-like Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein MHC class Ib antigen Protein SEC13 homolog Protein disulfide-isomerase A3 Protein transport protein SEC23 Protein transport protein Sec31A RT1 class I, M1, 5 RT1 class I, M1, gene 2 RT1 class I, M10, gene 1 RT1 class I, locus CE14 RT1 class I, locus CE16 RT1 class I, locus CE16 RT1 class I, locus CE3 RT1 class I, locus M1, gene 4 RT1 class Ia, locus A1 RT1 class Ia, locus A2 RT1 class Ib, locus M3, gene 1 RT1 class Ib, locus M5 RT1 class Ib, locus N3 RT1 class Ib, locus S3 SEC24 homolog A, COPII coat complex component SEC24 homolog B, COPII coat complex component SEC24 homolog C, COPII coat complex component SEC24 homolog D, COPII coat complex component Small COPII coat GTPase SAR1B Tapasin	A0A0G2K1E1 A0A0G2K4S5 A0A0G2K626 A0A0G2K881 A0A8I5YC56 A0A8I5ZLY7 A0A8I5ZTS2 A0A8I5ZYQ2 A0A8I6ADU9 A0A8I6AK64 A0A8I6ASE5 A0A8I6GE62 A0A8J8XB15 A0A8J8Y6P7 A0A8J8YPS9 B5DFC3 D3ZW15 D3ZZA8 E9PTZ7 E9PTZ9 F1LQF2 F1MAR7 G3V9S9 P06761 P07151 P11598 P18418 P35565 P36370 P36372 Q5HZY2 Q5XFW8 Q6MFZ3 Q6MFZ4 Q6W9J5 Q9JJ22 Q9Z2Q1	1700031A10Rik 2781a1 2788a1a2 2795a1 2800a1a2 2812a1a2 2824a1 2829a1a2 2846a1a2 2860a1 2865a2 2869a1a2 2879a1 2886a1-a1a2 2901a1a2 2906a1 2920a1a2 2927a1 2941a1a2 2945a1a2 2950a1 2953a1a2 2959a1 2976a1 2981a1a2 2984a1a2 2994a1 3082ex4-5 3252a3 3258a2 3281a3 3298a3 AABR07044308.2 AABR07044362.1 AABR07072807.1 AC120486.1 Abcb2 Abcb3 Appils Arts1 B2m Calr Canx ENSRNOG00000064836 ENSRNOG00000069480 Erap1 Erp60 Grp58 Grp78 H2-M10.6 H2-M10.6l Hspa5 LOC102546590 LOC120093125 Mtp1 Mtp2 Nerg-ps11 Nerg-ps12 Nerg-ps13 Nerg-ps14 Nerg-ps15 Pbp-ps Pdia3 Ppid-ps Ppp1cb-ps RT1-A1 RT1-A2 RT1-CE1 RT1-CE11 RT1-CE14 RT1-CE16 RT1-CE2 RT1-M1-1 RT1-M1-2 RT1-M1-3 RT1-M1-4 RT1-M1-5 RT1-M10-1 RT1-M10-2 RT1-M10-3 RT1-M10-4 RT1-M2 RT1-M3-1 RT1-M5 RT1-M7 RT1-M8 RT1-N3 RT1-O1l1 RT1-P2 RT1-S3 Rcrg1-ps25 Rcrg1-ps26 Rcrg1-ps27 Rcrg1-ps28 Rcrg1-ps29 Rcrg1-ps30 Rcrg1-ps31 Rcrg1-ps32 Rcrg1-ps33 Rcrg1-ps34 Rcrg1-ps35 Rcrg1-ps36 Rcrg1-ps37 Rcrg1-ps38 Rcrg1-ps39 Rcrg1-ps40 Rpl39-ps Sar1b Sec13 Sec13l1 Sec23a Sec24a Sec24b Sec24c Sec24d Sec31a Sec31l1 Tap1 Tap2 Tapbp Trim15 Trim31 Trim39-ps Vap1	Rattus norvegicus (Norway rat)
ER-Phagosome pathway	Antigen peptide transporter 1 Antigen peptide transporter 2 Beta-2-microglobulin Calreticulin HLA class I histocompatibility antigen, A-24 alpha chain-like Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein MHC class Ib antigen Protein disulfide-isomerase A3 RT1 class I, M1, 5 RT1 class I, M1, gene 2 RT1 class I, M10, gene 1 RT1 class I, locus CE14 RT1 class I, locus CE16 RT1 class I, locus CE16 RT1 class I, locus CE3 RT1 class I, locus M1, gene 4 RT1 class Ia, locus A1 RT1 class Ia, locus A2 RT1 class Ib, locus M3, gene 1 RT1 class Ib, locus M5 RT1 class Ib, locus N3 RT1 class Ib, locus S3 Synaptosomal-associated protein 23 Syntaxin-4 Tapasin Vesicle-associated membrane protein 3 Vesicle-associated membrane protein 8 Vesicle-trafficking protein SEC22b	A0A0G2K1E1 A0A0G2K4S5 A0A0G2K881 A0A8I5YC56 A0A8I5ZLY7 A0A8I5ZTS2 A0A8I5ZYQ2 A0A8I6ADU9 A0A8I6AK64 A0A8I6ASE5 A0A8I6GE62 A0A8J8XB15 A0A8J8Y6P7 A0A8J8YPS9 E9PTZ7 E9PTZ9 F1LQF2 F1MAR7 O70377 P07151 P11598 P18418 P36370 P36372 P63025 Q08850 Q4KM74 Q6MFZ3 Q6MFZ4 Q6W9J5 Q9WUF4	1700031A10Rik 2781a1 2788a1a2 2795a1 2800a1a2 2812a1a2 2824a1 2829a1a2 2846a1a2 2860a1 2865a2 2869a1a2 2879a1 2886a1-a1a2 2901a1a2 2906a1 2920a1a2 2927a1 2941a1a2 2945a1a2 2950a1 2953a1a2 2959a1 2976a1 2981a1a2 2984a1a2 2994a1 3082ex4-5 3252a3 3258a2 3281a3 3298a3 AABR07044308.2 AABR07044362.1 AABR07072807.1 AC120486.1 Abcb2 Abcb3 B2m Calr ENSRNOG00000064836 ENSRNOG00000069480 Erp60 Grp58 H2-M10.6 H2-M10.6l LOC102546590 LOC120093125 Mtp1 Mtp2 Nerg-ps11 Nerg-ps12 Nerg-ps13 Nerg-ps14 Nerg-ps15 Pbp-ps Pdia3 Ppid-ps Ppp1cb-ps RT1-A1 RT1-A2 RT1-CE1 RT1-CE11 RT1-CE14 RT1-CE16 RT1-CE2 RT1-M1-1 RT1-M1-2 RT1-M1-3 RT1-M1-4 RT1-M1-5 RT1-M10-1 RT1-M10-2 RT1-M10-3 RT1-M10-4 RT1-M2 RT1-M3-1 RT1-M5 RT1-M7 RT1-M8 RT1-N3 RT1-O1l1 RT1-P2 RT1-S3 Rcrg1-ps25 Rcrg1-ps26 Rcrg1-ps27 Rcrg1-ps28 Rcrg1-ps29 Rcrg1-ps30 Rcrg1-ps31 Rcrg1-ps32 Rcrg1-ps33 Rcrg1-ps34 Rcrg1-ps35 Rcrg1-ps36 Rcrg1-ps37 Rcrg1-ps38 Rcrg1-ps39 Rcrg1-ps40 Rpl39-ps Sec22b Sec22l1 Snap23 Stx4 Stx4a Syb3 Tap1 Tap2 Tapbp Trim15 Trim31 Trim39-ps Vamp3 Vamp8	Rattus norvegicus (Norway rat)
Endosomal/Vacuolar pathway	Beta-2-microglobulin HLA class I histocompatibility antigen, A-24 alpha chain-like Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Leucyl-cystinyl aminopeptidase MHC class Ib antigen RT1 class I, M1, 5 RT1 class I, M1, gene 2 RT1 class I, M10, gene 1 RT1 class I, locus CE14 RT1 class I, locus CE16 RT1 class I, locus CE16 RT1 class I, locus CE3 RT1 class I, locus M1, gene 4 RT1 class Ia, locus A1 RT1 class Ia, locus A2 RT1 class Ib, locus M3, gene 1 RT1 class Ib, locus M5 RT1 class Ib, locus N3 RT1 class Ib, locus S3	A0A0G2K1E1 A0A0G2K4S5 A0A0G2K881 A0A8I5YC56 A0A8I5ZTS2 A0A8I5ZYQ2 A0A8I6ADU9 A0A8I6AK64 A0A8I6ASE5 A0A8I6GE62 A0A8J8XB15 A0A8J8Y6P7 A0A8J8YPS9 E9PTZ7 E9PTZ9 F1LQF2 F1MAR7 P07151 P97629 Q6MFZ3 Q6MFZ4 Q6W9J5	1700031A10Rik 2781a1 2788a1a2 2795a1 2800a1a2 2812a1a2 2824a1 2829a1a2 2846a1a2 2860a1 2865a2 2869a1a2 2879a1 2886a1-a1a2 2901a1a2 2906a1 2920a1a2 2927a1 2941a1a2 2945a1a2 2950a1 2953a1a2 2959a1 2976a1 2981a1a2 2984a1a2 2994a1 3082ex4-5 3252a3 3258a2 3281a3 3298a3 AABR07044308.2 AABR07044362.1 AABR07072807.1 AC120486.1 B2m ENSRNOG00000064836 ENSRNOG00000069480 H2-M10.6 H2-M10.6l Irap LOC102546590 LOC120093125 Lnpep Nerg-ps11 Nerg-ps12 Nerg-ps13 Nerg-ps14 Nerg-ps15 Otase Pbp-ps Ppid-ps Ppp1cb-ps RT1-A1 RT1-A2 RT1-CE1 RT1-CE11 RT1-CE14 RT1-CE16 RT1-CE2 RT1-M1-1 RT1-M1-2 RT1-M1-3 RT1-M1-4 RT1-M1-5 RT1-M10-1 RT1-M10-2 RT1-M10-3 RT1-M10-4 RT1-M2 RT1-M3-1 RT1-M5 RT1-M7 RT1-M8 RT1-N3 RT1-O1l1 RT1-P2 RT1-S3 Rcrg1-ps25 Rcrg1-ps26 Rcrg1-ps27 Rcrg1-ps28 Rcrg1-ps29 Rcrg1-ps30 Rcrg1-ps31 Rcrg1-ps32 Rcrg1-ps33 Rcrg1-ps34 Rcrg1-ps35 Rcrg1-ps36 Rcrg1-ps37 Rcrg1-ps38 Rcrg1-ps39 Rcrg1-ps40 Rpl39-ps Trim15 Trim31 Trim39-ps	Rattus norvegicus (Norway rat)
Elastic fibre formation	Elastin Fibrillin 1 Fibulin-5 Furin Integrin beta-1 Integrin beta-3 Integrin beta-6 Integrin subunit alpha 5 Integrin subunit alpha V Lysyl oxidase homolog 2 Lysyl oxidase homolog Microfibril associated protein 2 Microfibril associated protein 5 Protein-lysine 6-oxidase protein-lysine 6-oxidase protein-lysine 6-oxidase	A0A0G2K1E2 A0A0G2K9S8 B5DF27 D3Z952 D3ZP82 D4A9V5 F1LZX9 G3V9M6 P16636 P23377 P49134 Q5FWS5 Q6AYF4 Q8R2H2 Q99372 Q9WVH8	Dance Eln Fbln5 Fbn1 Fur Furin Itga5 Itgav Itgb1 Itgb3 Itgb6 Lox Loxl1 Loxl2 Loxl3 Loxl4 Mfap2 Mfap5 Pcsk3	Rattus norvegicus (Norway rat)
Signal transduction by L1	Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta Dual specificity mitogen-activated protein kinase kinase 1 Dual specificity mitogen-activated protein kinase kinase 2 Fibroblast growth factor receptor 1 Integrin beta-1 Integrin beta-3 Integrin subunit alpha 2b Integrin subunit alpha 5 Integrin subunit alpha 9 Integrin subunit alpha V Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Neural cell adhesion molecule 1 Neural cell adhesion molecule L1 Neuropilin-1 Ras-related C3 botulinum toxin substrate 1 Receptor protein-tyrosine kinase Serine/threonine-protein kinase PAK 1 Vav guanine nucleotide exchange factor 2	A0A0G2K1E2 A0A8I6GGN2 D3ZN51 D3ZYG0 F1LZX9 F7FH41 G3V6K6 P13596 P19139 P21708 P35465 P36506 P49134 P63086 P67874 Q01986 Q04589 Q05695 Q6RUV5 Q8R2H2 Q9QWJ9	Caml1 Ck2n Csnk2a1 Csnk2a2 Csnk2b Egfr Erk1 Erk2 Fgfr1 Flg Itga2b Itga5 Itga9 Itgav Itgb1 Itgb3 L1cam Map2k1 Map2k2 Mapk Mapk1 Mapk3 Mek1 Mek2 Mkk2 Ncam Ncam1 Nrp1 Pak1 Prkm1 Prkm3 Prkmk1 Prkmk2 Rac Rac1 Vav2	Rattus norvegicus (Norway rat)
Fibronectin matrix formation	Carcinoembryonic antigen-related cell adhesion molecule 1 Fibronectin Integrin beta-1 Integrin subunit alpha 5	A0A0G2K1E2 P04937 P16573 P49134	Ceacam1 Fn1 Itga5 Itgb1	Rattus norvegicus (Norway rat)
GPER1 signaling	Integrin beta-1 Integrin subunit alpha 5 SHC-transforming protein 1 cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type I-beta regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase type II-beta regulatory subunit	A0A0G2K1E2 P09456 P12368 P12369 P27791 P49134 P68182 P81377 Q5M824	Itga5 Itgb1 Pkacb Prkaca Prkacb Prkar1a Prkar1b Prkar2a Prkar2b Shc1	Rattus norvegicus (Norway rat)
Formation of WDR5-containing histone-modifying complexes	A-kinase anchoring protein 8 like ASH2 like histone lysine methyltransferase complex subunit Biorientation of chromosomes in cell division 1-like 1 CXXC-type zinc finger protein 1 Histone acetyltransferase KAT8 Histone acetyltransferase Histone acetyltransferase Histone-lysine N-methyltransferase Host cell factor 1 Host cell factor 2 Host cell factor C1 KAT8 regulatory NSL complex subunit 1 KAT8 regulatory NSL complex subunit 2 KAT8 regulatory NSL complex subunit 3 Lysine acetyltransferase 14 MAP3K12 binding inhibitory protein 1 Menin Microspherule protein 1 PAX-interacting protein 1 PAXIP1-associated glutamate-rich protein 1 PC4 and SFRS1-interacting protein PHD finger protein 20-like protein 1 PHD finger protein 20 Protein Dr1 RB binding protein 5, histone lysine methyltransferase complex subunit SAGA-associated factor 29 SET domain containing 1A, histone lysine methyltransferase SET domain containing 1B, histone lysine methyltransferase Transcriptional adapter 2-alpha Transcriptional adapter 3 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit WD repeat domain 82 WD repeat-containing protein 5 YEATS domain containing 2 Zinc finger, ZZ-type containing 3 [histone H3]-lysine(4) N-methyltransferase [histone H3]-lysine(4) N-methyltransferase	A0A0G2K1E3 A0A0G2K6T6 A0A8I5Y222 A0A8I5ZPX3 A0A8I5ZS53 A0A8I6A4Z1 A0A8I6A524 A0A8I6AJF7 A0A8I6ANV4 D3ZC01 D3ZN95 D3ZQB7 D3ZSX6 D3ZSX8 D3ZTV7 D4ACX5 F1LRS1 F1M0L3 F7EKZ5 M0R565 M0R9X4 M0RC54 P0C606 P56558 Q3KR73 Q498M4 Q4V8F5 Q4V9H5 Q5M865 Q5RKG2 Q5U306 Q5XI06 Q5XI68 Q6AY70 Q6AYE3 Q812D1 Q9WVR8	Abp10 Ada3 Akap8l Ash2l Bod1l1 Ccdc101 Csrp2bp Cxxc1 Dr1 Hcfc1 Hcfc2 Kansl1 Kansl2 Kansl3 Kat14 Kat2a Kat2b Kat8 Kmt2a Kmt2b Kmt2c Ledgf Mbip Mcrs1 Men1 Mll Mll1 Myst1 Nsl2 Nsl3 Ogt Pagr1 Paxip1 Phf20 Phf20l1 Psip1 Rbbp5 Setd1a Setd1b Sgf29 Tada2a Tada2l Tada3 Tada3l Wdr5 Wdr82 Yeats2 Zzz3	Rattus norvegicus (Norway rat)
Biotin transport and metabolism	Acetyl-CoA carboxylase 1 Biotinidase Holocarboxylase synthetase Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial PDZ domain-containing protein 11 Propionyl-CoA carboxylase alpha chain, mitochondrial Propionyl-CoA carboxylase beta chain, mitochondrial Pyruvate carboxylase, mitochondrial Sodium-dependent multivitamin transporter acetyl-CoA carboxylase	A0A0G2K1F2 A0A8I6A968 A0A8I6A9Z8 O70247 P07633 P11497 P14882 P52873 Q5FVF9 Q5I0C3 Q5XIT9	Acac Acaca Acacb Btd Hlcs Mcca Mccc1 Mccc2 Pc Pcca Pccb Pdzd11 Slc5a6 Smvt	Rattus norvegicus (Norway rat)
HDMs demethylate histones	AT-rich interactive domain-containing protein 5B Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 Histone H3.1 Histone H3 Histone H4 Lysine demethylase 1B Lysine demethylase 2A Lysine demethylase 7A Lysine-specific demethylase 3A Lysine-specific demethylase 4D Lysine-specific demethylase Lysine-specific histone demethylase PHD finger protein 2 PHD finger protein 8 Ribosomal oxygenase 2 [histone H3]-dimethyl-L-lysine(36) demethylase [histone H3]-trimethyl-L-lysine(27) demethylase [histone H3]-trimethyl-L-lysine(27) demethylase [histone H3]-trimethyl-L-lysine(27) demethylase [histone H3]-trimethyl-L-lysine(4) demethylase [histone H3]-trimethyl-L-lysine(4) demethylase [histone H3]-trimethyl-L-lysine(4) demethylase [histone H3]-trimethyl-L-lysine(4) demethylase [histone H3]-trimethyl-L-lysine(9) demethylase [histone H3]-trimethyl-L-lysine(9) demethylase [histone H3]-trimethyl-L-lysine(9) demethylase	A0A0G2K1H0 A0A0G2K1Z1 A0A0G2K3N6 A0A0G2K5I7 A0A0G2K6V2 A0A0G2K736 A0A8I5ZPK6 A0A8I5ZVJ1 A0A8I5ZXX2 A0A8I6A5T3 A0A8I6ABR9 A0A8I6AEL5 A0A8I6AFH2 A0A8I6GMK8 A1A5Q5 D3ZJ08 D3ZP89 D3ZTJ7 D4AD31 F1LS62 M0RB75 P62804 Q63679 Q6AYK2 Q6LED0 Q8CFC1	Arid5b H3c13 H4c16 H4c2 H4f16 H4ft Hist1h4b Hist1h4m Hist2h3c2 Hist4 Hist4h4 Jhdm2a Jhdm3d Jmjd1a Jmjd2d Jmjd6 Kdm1a Kdm1b Kdm2a Kdm2b Kdm3a Kdm3b Kdm4a Kdm4b Kdm4c Kdm4d Kdm5a Kdm5b Kdm5c Kdm5d Kdm6a Kdm6b Kdm7a Mina Mina53 Phf2 Phf8 Ptdsr Riox2 Tsga Uty	Rattus norvegicus (Norway rat)
ABC transporters in lipid homeostasis	ATP binding cassette subfamily A member 12 ATP binding cassette subfamily A member 6 ATP binding cassette subfamily A member 9 ATP binding cassette subfamily G member 1 ATP-binding cassette sub-family A member 2 ATP-binding cassette sub-family A member 7 ATP-binding cassette sub-family D member 1 ATP-binding cassette sub-family D member 2 ATP-binding cassette sub-family D member 3 ATP-binding cassette sub-family G member 5 ATP-binding cassette sub-family G member 8 ATP-binding cassette subfamily G member 4 Apolipoprotein A-I Cholesterol transporter ABCA5 Peroxisomal biogenesis factor 19 Peroxisomal biogenesis factor 3 Phospholipid-transporting ATPase ABCA3	A0A0G2K1Q8 A0A0G2K3S4 D3ZCM3 D3ZHR2 D4A7J3 G3V642 M0R890 P04639 P16970 P58428 Q7TNJ2 Q8CF82 Q99PE7 Q9ESR9 Q9JJK4 Q9QY44 Q9QYU1	Abc2 Abca12 Abca2 Abca3 Abca5 Abca6 Abca7 Abca9 Abcd1 Abcd2 Abcd3 Abcg1 Abcg4 Abcg5 Abcg8 Aldr Aldrp Apoa1 Pex19 Pex3 Pmp70 Pxf Pxmp1	Rattus norvegicus (Norway rat)
Surfactant metabolism	Adenosine receptor A2a Adenosine receptor A2b Adhesion G protein-coupled receptor F5 Alpha-2A adrenergic receptor Alpha-2C adrenergic receptor Coiled-coil domain containing 59 Cytoskeleton-associated protein 4 LIM and cysteine-rich domains 1 Napsin A aspartic peptidase P2Y purinoceptor 2 Palmitoyltransferase ZDHHC2 Phospholipid-transporting ATPase ABCA3 Pro-cathepsin H Pulmonary surfactant-associated protein A Pulmonary surfactant-associated protein B Pulmonary surfactant-associated protein D Sodium-dependent phosphate transport protein 2A Sodium-dependent phosphate transport protein 2B Surfactant protein C Transcription factor GATA-6 Transcription termination factor 1	A0A0G2K1Q8 A0A8I6AA77 D3ZH41 D4ADF2 F7FL28 P00786 P08427 P11685 P22086 P22355 P22909 P29276 P30543 P35248 P41232 P46153 Q06496 Q6AYF2 Q9JJ09 Q9JKR5 Q9WVT0	Abca3 Adgrf5 Adora2a Adora2b Adra2a Adra2c Ccdc59 Ckap4 Ctsh Gata6 Gpr116 Gprhep Lmcd1 Napsa P2ru1 P2ry2 Sftp-1 Sftp1 Sftp2 Sftp3 Sftp4 Sftpa Sftpa1 Sftpb Sftpc Sftpd Slc17a2 Slc34a1 Slc34a2 Srec Ttf1 Zdhhc2	Rattus norvegicus (Norway rat)
PI-3K cascade:FGFR3	Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 18 Fibroblast growth factor 1 Fibroblast growth factor 20 Fibroblast growth factor 23 Fibroblast growth factor 2 Fibroblast growth factor 5 Fibroblast growth factor 9 Fibroblast growth factor receptor substrate 2 Fibroblast growth factor receptor Fibroblast growth factor Fibroblast growth factor GRB2-associated binding protein 1 Growth factor receptor-bound protein 2 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Tyrosine-protein phosphatase non-receptor type 11	A0A0G2K210 A0A0G2K344 A0A8I6B5D5 D3ZAL7 D4A244 F1LSQ8 O54769 O88182 P13109 P36364 P41499 P48807 P61149 P62994 P63076 Q63787 Q8VI82 Q9EST9	Ash Fgf-1 Fgf-2 Fgf-5 Fgf-9 Fgf1 Fgf16 Fgf17 Fgf18 Fgf2 Fgf20 Fgf23 Fgf4 Fgf5 Fgf7a Fgf8 Fgf9 Fgfa Fgfr3 Frs2 Gab1 Grb2 Pik3ca Pik3r1 Ptpn11	Rattus norvegicus (Norway rat)
Negative regulation of FGFR3 signaling	E3 ubiquitin-protein ligase CBL Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 18 Fibroblast growth factor 1 Fibroblast growth factor 20 Fibroblast growth factor 23 Fibroblast growth factor 2 Fibroblast growth factor 5 Fibroblast growth factor 9 Fibroblast growth factor receptor substrate 2 Fibroblast growth factor receptor Fibroblast growth factor Fibroblast growth factor Growth factor receptor-bound protein 2 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Polyubiquitin-B Polyubiquitin-C Tyrosine-protein phosphatase non-receptor type 11 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2K210 A0A8I6A5Y3 A0A8I6B5D5 A0A8I6G3R2 D4A244 F1LSQ8 O54769 O88182 P0CG51 P13109 P21708 P36364 P41499 P48807 P61149 P62982 P62994 P63076 P63086 Q63429 Q8VI82 Q9EST9	Ash Cbl Erk1 Erk2 Fgf-1 Fgf-2 Fgf-5 Fgf-9 Fgf1 Fgf16 Fgf17 Fgf18 Fgf2 Fgf20 Fgf23 Fgf4 Fgf5 Fgf7a Fgf8 Fgf9 Fgfa Fgfr3 Frs2 Grb2 LOC100360645 Mapk Mapk1 Mapk3 Prkm1 Prkm3 Ptpn11 Rps27a Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1	Rattus norvegicus (Norway rat)
FRS-mediated FGFR3 signaling	Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 18 Fibroblast growth factor 1 Fibroblast growth factor 20 Fibroblast growth factor 23 Fibroblast growth factor 2 Fibroblast growth factor 5 Fibroblast growth factor 9 Fibroblast growth factor receptor substrate 2 Fibroblast growth factor receptor substrate 3 Fibroblast growth factor receptor Fibroblast growth factor Fibroblast growth factor GTPase HRas GTPase KRas GTPase NRas Growth factor receptor-bound protein 2 SOS Ras/Rac guanine nucleotide exchange factor 1 Tyrosine-protein phosphatase non-receptor type 11	A0A0G2K210 A0A8I6B5D5 D4A244 D4A3T0 F1LSQ8 O54769 O88182 P08644 P13109 P20171 P36364 P41499 P48807 P61149 P62994 P63076 Q04970 Q52RG8 Q8VI82 Q9EST9	Ash Fgf-1 Fgf-2 Fgf-5 Fgf-9 Fgf1 Fgf16 Fgf17 Fgf18 Fgf2 Fgf20 Fgf23 Fgf4 Fgf5 Fgf7a Fgf8 Fgf9 Fgfa Fgfr3 Frs2 Frs3 Grb2 Hras Hras1 Kras Kras2 Nras Ptpn11 Snt2 Sos1	Rattus norvegicus (Norway rat)
SHC-mediated cascade:FGFR3	Fibroblast growth factor 16 Fibroblast growth factor 17 Fibroblast growth factor 18 Fibroblast growth factor 1 Fibroblast growth factor 20 Fibroblast growth factor 23 Fibroblast growth factor 2 Fibroblast growth factor 5 Fibroblast growth factor 9 Fibroblast growth factor receptor Fibroblast growth factor Fibroblast growth factor GTPase HRas GTPase KRas GTPase NRas Growth factor receptor-bound protein 2 SHC-transforming protein 1 SOS Ras/Rac guanine nucleotide exchange factor 1	A0A0G2K210 A0A8I6B5D5 D4A3T0 F1LSQ8 O54769 O88182 P08644 P13109 P20171 P36364 P48807 P61149 P62994 P63076 Q04970 Q5M824 Q8VI82 Q9EST9	Ash Fgf-1 Fgf-2 Fgf-5 Fgf-9 Fgf1 Fgf16 Fgf17 Fgf18 Fgf2 Fgf20 Fgf23 Fgf4 Fgf5 Fgf7a Fgf8 Fgf9 Fgfa Fgfr3 Grb2 Hras Hras1 Kras Kras2 Nras Shc1 Sos1	Rattus norvegicus (Norway rat)

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