GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 676 - 700 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▲ Organism GlyTouCan ID
GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2
  • Btrc
  • Cul1
  • Gsk3b
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Nfe2l2
  • Nrf2
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psmf1
  • Rbx1
  • Ring12
  • Rps27a
  • Skp1
  • Skp1a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Pyrimidine catabolism
  • Bup1
  • DPD
  • Dpyd
  • Dpys
  • Ecgf1
  • Nt5
  • Nt5c
  • Nt5c1a
  • Nt5c3a
  • Nt5e
  • Nt5m
  • Nte
  • Tymp
  • Upb1
  • Upp1
  • Upp2
Rattus norvegicus (Norway rat)
Acetylcholine Neurotransmitter Release Cycle
  • Bzrap1
  • Chat
  • Cht1
  • Cplx1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a3
  • Slc5a7
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Syb2
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vacht
  • Vamp2
  • Vat
Rattus norvegicus (Norway rat)
Norepinephrine Neurotransmitter Release Cycle
  • Bzrap1
  • Cplx1
  • Maoa
  • Oct1
  • Oct2
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a2
  • Slc22a1
  • Slc22a2
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Svat
  • Syb2
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Vmat2
Rattus norvegicus (Norway rat)
Serotonin Neurotransmitter Release Cycle
  • Bzrap1
  • Cplx1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a2
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Svat
  • Syb2
  • Syn1
  • Syn2
  • Syn3
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Vmat2
Rattus norvegicus (Norway rat)
Activation of C3 and C5
  • C2
  • C3
  • C4
  • C4a
  • C4b
  • C5
  • Cfb
Rattus norvegicus (Norway rat)
Alternative complement activation
  • C3
Rattus norvegicus (Norway rat)
Degradation of DVL
  • C3ip1
  • Cul3
  • Dact1
  • Dvl1
  • Dvl2
  • Dvl3
  • Hecw1
  • Klhl12
  • LOC100360645
  • LOC100360846
  • LOC100361515
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rbx1
  • Ring12
  • Rps27a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Terminal pathway of complement
  • C5
  • C6
Rattus norvegicus (Norway rat)
Inactivation, recovery and regulation of the phototransduction cascade
  • CNCG2
  • CNCG3L
  • CNCG4
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camkmt
  • Clnmt
  • Cncg
  • Cncg1
  • Cnga1
  • Cngb1
  • Fnta
  • Fntb
  • Gnat1
  • Gnb5
  • Gngt1
  • Gprk2l
  • Grk1
  • Grk4
  • Guc2e
  • Guc2f
  • Guca1a
  • Guca1b
  • Gucy2d
  • Gucy2e
  • Gucy2f
  • Metap1
  • Metap2
  • Mnpep
  • Nmt1
  • Nmt2
  • P67eif2
  • Pde6a
  • Pde6b
  • Pde6g
  • Ppef1
  • RCNC2
  • Rcvrn
  • Rgs9
  • Rgs9bp
  • Rho
  • Rhok
  • Sag
Rattus norvegicus (Norway rat)
Activation of the phototransduction cascade
  • CNCG2
  • CNCG3L
  • CNCG4
  • Cncg
  • Cncg1
  • Cnga1
  • Cngb1
  • Gnat1
  • Gnb1
  • Gngt1
  • Pde6a
  • Pde6b
  • Pde6g
  • RCNC2
  • Rho
Rattus norvegicus (Norway rat)
Reversible hydration of carbon dioxide
  • Ca1
  • Ca2
  • Ca3
  • Ca4
  • Ca5
  • Ca5a
  • Ca5b
  • Car1
  • Car12
  • Car13
  • Car14
  • Car5b
  • Car6
  • Car9
Rattus norvegicus (Norway rat)
Ca2+ pathway
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Camk2a
  • Catnb
  • Cna2
  • Cnb
  • Ctnnb1
  • Fzd2
  • Fzd3
  • Fzd4
  • Fzd5
  • Fzd6
  • Gna0
  • Gnao
  • Gnao1
  • Gnat2
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Kras
  • Kras2
  • Lef1
  • Map3k7
  • Nfatc1
  • Nlk
  • Pde6a
  • Pde6b
  • Pde6g
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
  • Tcf7l2
  • Wnt-5a
  • Wnt11
  • Wnt5a
Rattus norvegicus (Norway rat)
Calcineurin activates NFAT
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Cna2
  • Cnb
  • Fkbp1
  • Fkbp1a
  • Nfat4
  • Nfatc1
  • Nfatc2
  • Nfatc3
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
Rattus norvegicus (Norway rat)
CLEC7A (Dectin-1) induces NFAT activation
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Cna2
  • Cnb
  • Nfat4
  • Nfatc1
  • Nfatc2
  • Nfatc3
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
Rattus norvegicus (Norway rat)
Activation of RAC1 downstream of NMDARs
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk1
  • Camkk1
  • Camkk2
Rattus norvegicus (Norway rat)
CaMK IV-mediated phosphorylation of CREB
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk4
  • Camkk1
  • Camkk2
Rattus norvegicus (Norway rat)
CREB1 phosphorylation through the activation of CaMKII/CaMKK/CaMKIV cascasde
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk4
  • Camkk1
  • Camkk2
Rattus norvegicus (Norway rat)
RHO GTPases activate PAKs
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Cdc42
  • Flna
  • LOC685883
  • Limk
  • Limk1
  • Mbs
  • Mrlc2
  • Mrlcb
  • Myh10
  • Myh14
  • Myh9
  • Myl12b
  • Myl6
  • Myl9
  • Mylc2b
  • Mylk
  • Mypt1
  • Myrl2
  • Nf2
  • Pak1
  • Pak2
  • Pak3
  • Ppp1cb
  • Ppp1r12a
  • Ppp1r12b
  • Rac
  • Rac1
Rattus norvegicus (Norway rat)
Activation of Ca-permeable Kainate Receptor
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Dlg1
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh3
  • Dlgh4
  • Glur5
  • Glur6
  • Glur7
  • Grik1
  • Grik2
  • Grik3
  • Grik4
  • Grik5
  • Ncald
  • Psd95
Rattus norvegicus (Norway rat)
Synthesis of IP3 and IP4 in the cytosol
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Inpp5b
  • Inpp5d
  • Inpp5j
  • Inppl1
  • Ip3kc
  • Itpk1
  • Itpka
  • Itpkb
  • Itpkc
  • Ocrl
  • Pib5pa
  • Pipp
  • Plcb1
  • Plcb2
  • Plcb3
  • Plcb4
  • Plcd1
  • Plcd3
  • Plcd4
  • Plce
  • Plce1
  • Plcg1
  • Plcg2
  • Plch1
  • Plch2
  • Plcz1
  • Pld4
  • Pten
  • Ship
  • Ship1
  • Ship2
  • Synj1
Rattus norvegicus (Norway rat)
Sodium/Calcium exchangers
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Nckx1
  • Nckx2
  • Nckx3
  • Nckx6
  • Nclx
  • Ncx1
  • Ncx2
  • Ncx3
  • Slc24a1
  • Slc24a2
  • Slc24a3
  • Slc24a4
  • Slc24a5
  • Slc24a6
  • Slc8a1
  • Slc8a2
  • Slc8a3
  • Slc8b1
  • Sri
Rattus norvegicus (Norway rat)
Phase 0 - rapid depolarisation
  • Cach2
  • Cacn2
  • Cacna1c
  • Cacna2d2
  • Cacnb1
  • Cacnb2
  • Cacng4
  • Cacng6
  • Cacng7
  • Cacng8
  • Cacnl1a1
  • Cacnlb1
  • Cacnlb2
  • Cchl1a1
Rattus norvegicus (Norway rat)
Presynaptic depolarization and calcium channel opening
  • Cach4
  • Cach5
  • Cach6
  • Cacn3
  • Cacna1a
  • Cacna1b
  • Cacna1e
  • Cacna2d2
  • Cacna2d3
  • Cacnb1
  • Cacnb2
  • Cacnb3
  • Cacnb4
  • Cacng2
  • Cacng4
  • Cacnl1a4
  • Cacnl1a5
  • Cacnl1a6
  • Cacnlb1
  • Cacnlb2
  • Cacnlb3
  • Stg
Rattus norvegicus (Norway rat)
Carnitine metabolism
  • Cact
  • Cpt-1
  • Cpt-2
  • Cpt1
  • Cpt1a
  • Cpt1b
  • Cpt2
  • Mid1ip1
  • Mig12
  • Nr2b1
  • Octn2
  • Prkab2
  • Prkag2
  • Rxra
  • S14
  • Slc22a5
  • Slc25a20
  • Thrsp
Rattus norvegicus (Norway rat)

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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