GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 701 - 725 of 1070 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Processing of Capped Intron-Containing Pre-mRNA
  • AABR07026797.1
  • AC109542.1
  • Auf1
  • Cbp20
  • Cbp80
  • Cl-4
  • Clp1
  • Cpsf1
  • Cpsf2
  • Cpsf3
  • Cpsf4
  • Cpsf5
  • Cpsf6
  • Cpsf7
  • Cstf1
  • Cstf2
  • Cstf2t
  • Cstf3
  • Fblim1
  • Fip1l1
  • Fus
  • Gtf2f1
  • Gtf2f2
  • Hnrnp
  • Hnrnpa1
  • Hnrnpa2b1
  • Hnrnpa3
  • Hnrnpc
  • Hnrnpd
  • Hnrnpf
  • Hnrnph1
  • Hnrnph2
  • Hnrnpk
  • Hnrnpl
  • Hnrnpr
  • Hnrnpr-ps2
  • Hnrnpu
  • Hnrpa1
  • Hnrpa2b1
  • Hnrpc
  • Hnrpd
  • Hnrpf
  • Hnrph
  • Hnrph1
  • Hnrph2
  • Hnrpk
  • Hnrpr
  • Hnrpu
  • Hrs
  • LOC100911361
  • LOC120096281
  • LOC120098305
  • Mettl3
  • Ncbp1
  • Ncbp2
  • Nudt21
  • Pabpn1
  • Papola
  • Pcbp1
  • Pcbp2
  • Pcf11
  • Polr2a
  • Polr2b
  • Polr2c
  • Polr2d
  • Polr2e
  • Polr2f
  • Polr2g
  • Polr2i
  • Polr2j
  • Ptb
  • Ptbp1
  • Pybp
  • Rap30
  • Rbm10
  • Rbmx
  • Rbmxrt
  • Sfrs10
  • Sfrs2
  • Sfrs5
  • Sfrs9
  • Srsf1
  • Srsf10
  • Srsf11
  • Srsf12
  • Srsf2
  • Srsf3
  • Srsf5
  • Srsf7
  • Srsf8
  • Srsf9
  • Sympk
  • Tbfii
  • Tra2b
  • Wtap
  • Yb1
  • Ybx1
Rattus norvegicus (Norway rat)
Removal of aminoterminal propeptides from gamma-carboxylated proteins
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Fur
  • Furin
  • Gas6
  • Pcsk3
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Gas6
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
Gamma-carboxylation of protein precursors
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Ggcx
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
Extrinsic Pathway of Fibrin Clot Formation
  • Cf3
  • Cf9
  • F10
  • F3
  • F7
  • F9
  • Tfpi
Rattus norvegicus (Norway rat)
Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation
  • F8
  • Fn3k
  • Fn3krp
  • Icmt
  • Tpst1
  • Tpst2
Rattus norvegicus (Norway rat)
Uptake of dietary cobalamins into enterocytes
  • Amn
  • Cblif
  • Cubn
  • Gif
  • Ifcr
Rattus norvegicus (Norway rat)
Collagen chain trimerization
  • Col10a1
  • Col11a1
  • Col11a2
  • Col13a1
  • Col14a1
  • Col15a1
  • Col16a1
  • Col17a1
  • Col18a1
  • Col19a1
  • Col1a1
  • Col1a2
  • Col20a1
  • Col22a1
  • Col23a1
  • Col25a1
  • Col26a1
  • Col28a1
  • Col2a1
  • Col3a1
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • Col4a6
  • Col5a1
  • Col5a2
  • Col5a3
  • Col7a1
  • Col8a1
  • Col8a2
  • LOC100909752
  • LOC100911572
  • LOC687064
  • RGD1564680
Rattus norvegicus (Norway rat)
Signaling by PDGF
  • 2b7
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • Fur
  • Furin
  • Iegf
  • LOC100911572
  • Pcsk3
  • Pdgfa
  • Pdgfb
  • Pdgfc
  • Pdgfd
  • Pdgfr
  • Pdgfr1
  • Pdgfra
  • Pdgfrb
  • Plat
  • Plg
  • Ptpn12
  • Rpa1
  • Scdgf
  • Scdgfb
  • Spp-1
  • Spp1
  • Thbs1
  • Thbs2
  • Thbs3
  • Thbs4
  • Tsp-4
  • Tsp4
Rattus norvegicus (Norway rat)
Initial triggering of complement
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • C1qa
  • C1qb
  • C1qc
  • C1qg
  • C1r
  • C1s
  • C2
  • C4
  • C4a
  • C4b
  • Cfb
  • Colec10
  • Crarf
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
  • RGD1561722
  • RGD1564696
  • r-gsp
Rattus norvegicus (Norway rat)
Lectin pathway of complement activation
  • Colec10
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
Rattus norvegicus (Norway rat)
Interleukin receptor SHC signaling
  • Ash
  • Csf2
  • Csf2rb
  • Csfgm
  • Gab2
  • Grb2
  • Il-2
  • Il-3
  • Il-5
  • Il2
  • Il2ra
  • Il2rb
  • Il3
  • Il3ra
  • Il5
  • Inpp5d
  • Inppl1
  • Jak1
  • Jak2
  • Jak3
  • Pik3ca
  • Pik3cb
  • Pik3cd
  • Pik3r1
  • Pik3r2
  • Pik3r3
  • Ptph6
  • Ptpn6
  • Shc1
  • Ship
  • Ship1
  • Ship2
  • Sos1
Rattus norvegicus (Norway rat)
Activation of C3 and C5
  • C2
  • C3
  • C4
  • C4a
  • C4b
  • C5
  • Cfb
Rattus norvegicus (Norway rat)
Alternative complement activation
  • C3
Rattus norvegicus (Norway rat)
Terminal pathway of complement
  • C5
  • C6
Rattus norvegicus (Norway rat)
GABA synthesis, release, reuptake and degradation
  • Cplx1
  • Dnajc5
  • Gad1
  • Gad2
  • Gad65
  • Gad67
  • Hsc70
  • Hsc73
  • Hspa8
  • Rab3a
  • Rim1
  • Rims1
  • Sap
  • Slc32a1
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Syb2
  • Syt1
  • Unc18a
  • Vamp2
  • Vgat
  • Viaat
Rattus norvegicus (Norway rat)
Serotonin Neurotransmitter Release Cycle
  • Bzrap1
  • Cplx1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a2
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Svat
  • Syb2
  • Syn1
  • Syn2
  • Syn3
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Vmat2
Rattus norvegicus (Norway rat)
Condensation of Prophase Chromosomes
  • Ccnb1
  • Cdc2
  • Cdc2a
  • Cdk1
  • Cdkn1
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist4
  • Hist4h4
  • Kmt5a
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Mcph1
  • Ncapd3
  • Ncapg2
  • Ncaph2
  • Phf8
  • Plk
  • Plk1
  • Rb-1
  • Rb1
  • Set
  • Smc2
  • Smc4
  • Th2b
Rattus norvegicus (Norway rat)
Ion influx/efflux at host-pathogen interface
  • Atox1
  • Atp7a
  • Bcg
  • Mnk
  • Nramp1
  • Pdzd11
  • Rah1
  • Slc11a1
Rattus norvegicus (Norway rat)
Regulation of RUNX1 Expression and Activity
  • Aml1
  • Cbfa2
  • Cbfb
  • Ccnd1
  • Ccnd2
  • Ccnd3
  • Cdk6
  • Pml
  • Ptpn11
  • Runx1
  • Vin-1
Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in interleukin signaling
  • Aml1
  • Cbfa2
  • Cbfb
  • Elf1
  • Runx1
Rattus norvegicus (Norway rat)
RUNX1 regulates estrogen receptor mediated transcription
  • Aml1
  • Cbfa2
  • Cbfb
  • Esr
  • Esr1
  • Estr
  • Nr3a1
  • Runx1
Rattus norvegicus (Norway rat)
RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs)
  • Aml1
  • Cbfa2
  • Cbfb
  • Foxp3
  • Runx1
Rattus norvegicus (Norway rat)
RUNX3 regulates p14-ARF
  • Cbfb
  • Ccnd1
  • Ep300
  • Hdac4
  • Runx3
  • Tgfb1
Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of myeloid cells
  • Aml1
  • Cbfa2
  • Cbfb
  • Cbp
  • Crebbp
  • Runx1
Rattus norvegicus (Norway rat)

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