GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 51 - 75 of 1070 in total
Pathway Name ▼ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Tryptophan catabolism
  • Aadat
  • Ccbl1
  • Haao
  • Ido
  • Ido1
  • Ido2
  • Indo
  • Indol1
  • Kat
  • Kat2
  • Kmo
  • Kyat1
  • Kynu
  • Lat1
  • Mpe16
  • Slc36a4
  • Slc3a2
  • Slc7a5
  • Ta1
  • Tdo
  • Tdo2
Rattus norvegicus (Norway rat)
Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA
  • Dcp1a
  • Dcp2
  • Dis3
  • Exosc1
  • Exosc2
  • Exosc3
  • Exosc4
  • Exosc5
  • Exosc6
  • Exosc7
  • Exosc8
  • Exosc9
  • LOC103690064
  • LOC679140
  • Mapkapk2
  • Tis11
  • Tnpo1
  • Ttp
  • Xrn1
  • Ywhab
  • Zfp36
Rattus norvegicus (Norway rat)
Triglyceride catabolism
  • Blbp
  • FABP12
  • Fabp1
  • Fabp2
  • Fabp3
  • Fabp4
  • Fabp5
  • Fabp6
  • Fabp7
  • Fabp9
  • Fabpi
  • Gpd2
  • Ilbp
  • Illbp
  • Perf15
  • Pnpla4
  • Pnpla5
  • RGD1562200
Rattus norvegicus (Norway rat)
Transport of vitamins, nucleosides, and related molecules
  • Acatn
  • Pdzd11
  • Slc33a1
  • Slc5a6
  • Smvt
Rattus norvegicus (Norway rat)
Transport of the SLBP independent Mature mRNA
  • Aaas
  • Alyref
  • Cbp20
  • Cbp80
  • Eif4e
  • Gp210
  • LOC683983
  • Mrnp41
  • Ncbp1
  • Ncbp2
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Nxf1
  • Pcnt1
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Sec13
  • Sec13l1
  • Tap
  • Tmem48
  • Tpr
Rattus norvegicus (Norway rat)
Transport of the SLBP Dependant Mature mRNA
  • Aaas
  • Alyref
  • Cbp20
  • Cbp80
  • Eif4e
  • Gp210
  • LOC683983
  • Mrnp41
  • Ncbp1
  • Ncbp2
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Nxf1
  • Pcnt1
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Sec13
  • Sec13l1
  • Slbp
  • Tap
  • Tmem48
  • Tpr
Rattus norvegicus (Norway rat)
Transport of organic anions
  • Avp
  • Bsat1
  • Matr1
  • Mct8
  • Oatp1a4
  • Oatp1b2
  • Oatp1c1
  • Oatp2
  • Oatp2b1
  • Oatp3a1
  • Oatp4a1
  • Oatp4c1
  • Oatpd
  • Oatpe
  • Oatpf
  • Pgt2
  • SLC16A2
  • Slc21a10
  • Slc21a11
  • Slc21a12
  • Slc21a14
  • Slc21a2
  • Slc21a20
  • Slc21a5
  • Slc21a9
  • Slco1a4
  • Slco1b2
  • Slco1c1
  • Slco2a1
  • Slco2b1
  • Slco3a1
  • Slco4a1
  • Slco4c1
Rattus norvegicus (Norway rat)
Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane
  • Aac1
  • Ant1
  • Ant2
  • Arl184
  • Arl2
  • Arl2bp
  • Bart
  • Bart1
  • Cnt1
  • Cnt2
  • Cnt3
  • Ent1
  • Ent2
  • Ent3
  • Slc25a4
  • Slc25a5
  • Slc28a1
  • Slc28a2
  • Slc28a3
  • Slc29a1
  • Slc29a2
  • Slc29a3
  • Slc29a4
  • Spnt
Rattus norvegicus (Norway rat)
Transport of inorganic cations/anions and amino acids/oligopeptides
  • Ctns
  • Eaac1
  • Eaat1
  • Eaat2
  • Eaat3
  • Eaat4
  • Glt1
  • Slc1a1
  • Slc1a2
  • Slc1a3
  • Slc1a6
  • Slc1a7
  • Slc25a26
  • Slc32a1
  • Vgat
  • Viaat
Rattus norvegicus (Norway rat)
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Gas6
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
Transport of fatty acids
  • Apod
  • Fatp
  • Fatp1
  • Lcn12
  • Lcn9
  • Slc27a1
  • Slc27a4
  • Slc27a6
  • Vegp
  • Vegp1
  • Vegp2
Rattus norvegicus (Norway rat)
Transport of bile salts and organic acids, metal ions and amine compounds
  • Cd92
  • Cdw92
  • Cht1
  • Ctl1
  • Ctl2
  • Ctl3
  • Ctl4
  • Mate1
  • Ng22
  • Slc10a6
  • Slc14a1
  • Slc14a2
  • Slc44a1
  • Slc44a2
  • Slc44a3
  • Slc44a4
  • Slc44a5
  • Slc47a1
  • Slc5a7
  • Soat
  • TPPT1
  • UT11
  • UT3
  • Ut2
Rattus norvegicus (Norway rat)
Transport of RCbl within the body
  • Abcc1
  • Arh
  • Cd320
  • Ldlrap1
  • Lrp2
  • Mrp1
  • Tcn2
Rattus norvegicus (Norway rat)
Transport of Mature mRNA derived from an Intron-Containing Transcript
  • AABR07026797.1
  • Aaas
  • Alyref
  • Bat1
  • Bat1a
  • Casc3
  • Cbp20
  • Cbp80
  • Cdc40
  • Chtop
  • Cl-4
  • Ddx39
  • Ddx39a
  • Ddx39b
  • Ddx48
  • Ddxl
  • Dhx38
  • Eif4a3
  • Fmip
  • Fop
  • Fyttd1
  • Gle1
  • Gle1l
  • Gp210
  • Hcc1
  • Hrs
  • LOC683983
  • Magoh
  • Magohb
  • Mln51
  • Mrnp41
  • Ncbp1
  • Ncbp2
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Nxf1
  • Nxf2
  • Nxf5
  • Nxf7
  • Nxt1
  • Pcnt1
  • Pdrp
  • Poldip3
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Rbm8
  • Rbm8a
  • Rnps1
  • Sarnp
  • Sec13
  • Sec13l1
  • Sfrs2
  • Sfrs5
  • Sfrs9
  • Slu7
  • Srrm1
  • Srsf1
  • Srsf11
  • Srsf2
  • Srsf3
  • Srsf5
  • Srsf7
  • Srsf9
  • Tap
  • Thoc2
  • Thoc5
  • Thoc6
  • Thoc7
  • Tmem48
  • Tpr
  • U2af1
  • U2af1l4
  • U2af2
  • Uap56
  • Uif
  • Upf3b
  • wdr58
Rattus norvegicus (Norway rat)
Transport of Mature mRNA Derived from an Intronless Transcript
  • Aaas
  • Alyref
  • Cbp20
  • Cbp80
  • Cpsf1
  • Cpsf2
  • Cpsf3
  • Cpsf4
  • Eif4e
  • Fip1l1
  • Gp210
  • LOC683983
  • Mrnp41
  • Ncbp1
  • Ncbp2
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Nxf1
  • Pcnt1
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Sec13
  • Sec13l1
  • Sympk
  • Tap
  • Tmem48
  • Tpr
Rattus norvegicus (Norway rat)
Transport and synthesis of PAPS
  • Dtdst
  • Papss1
  • Papss2
  • Sat1
  • Slc26a1
  • Slc26a2
  • Slc35b2
  • Slc35b3
Rattus norvegicus (Norway rat)
Translocation of ZAP-70 to Immunological synapse
  • AABR07044416.1
  • Arrb2-ps
  • Cd247
  • Cd3d
  • Cd3e
  • Cd3g
  • Cd4
  • DA1
  • Db2
  • ENSRNOG00000065769
  • ENSRNOG00000065908
  • ENSRNOG00000065955
  • ENSRNOG00000070909
  • H2-Ea
  • Hla-dma
  • Hla-dmb
  • LOC100911800
  • Lck
  • Psmb9
  • Ptpn22
  • RT1-Ba
  • RT1-Bb
  • RT1-DOb
  • RT1-Da
  • RT1-Db1
  • RT1-Db2
  • RT1-Ha
  • RT1-Hb-ps1
  • T3d
  • Tap1
  • Tap2
  • Tesb
  • Trbv16
  • Zap70
Rattus norvegicus (Norway rat)
Translesion Synthesis by POLH
  • LOC100360645
  • Npl4
  • Nploc4
  • Pcna
  • Polh
  • Rfc1
  • Rfc2
  • Rfc3
  • Rfc4
  • Rfc5
  • Rpa1
  • Rpa2
  • Rpa3
  • Rps27a
  • Sprtn
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ufd1
  • Ufd1l
  • Vcp
Rattus norvegicus (Norway rat)
Translation initiation complex formation
  • AABR07029195.1
  • EIF3EIP
  • EIF3F
  • EIF3K
  • EIF3L
  • EIF3M
  • EIF3S12
  • EIF3S5
  • EIF3S6IP
  • Eif1a
  • Eif2a
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Eif3a
  • Eif3b
  • Eif3c
  • Eif3d
  • Eif3e
  • Eif3f
  • Eif3g
  • Eif3h
  • Eif3i
  • Eif3j
  • Eif3k
  • Eif3l
  • Eif3m
  • Eif3s1
  • Eif3s10
  • Eif3s2
  • Eif3s3
  • Eif3s4
  • Eif3s6
  • Eif3s7
  • Eif3s8
  • Eif3s9
  • Eif4a1
  • Eif4a2
  • Eif4e
  • Eif4g1
  • Eif4h
  • Fau
  • Fte-1
  • Fte1
  • Int6
  • LOC100361854
  • LOC100361933
  • Lamr1
  • Pabp1
  • Pabpc1
  • Rig
  • Rps10
  • Rps11
  • Rps12l8
  • Rps13
  • Rps14
  • Rps15
  • Rps15a
  • Rps16
  • Rps17
  • Rps18
  • Rps19
  • Rps2
  • Rps20
  • Rps21
  • Rps23
  • Rps24
  • Rps25
  • Rps26
  • Rps26-ps13
  • Rps26l2
  • Rps26l4
  • Rps26l6
  • Rps27
  • Rps27a
  • Rps27l
  • Rps28
  • Rps29
  • Rps3
  • Rps3a
  • Rps4
  • Rps4x
  • Rps4y2
  • Rps5
  • Rps6
  • Rps7
  • Rps7-ps23
  • Rps8
  • Rps9
  • Rpsa
  • S27-1
  • Uba80
  • Ubcep1
  • Wbscr1
Rattus norvegicus (Norway rat)
Transferrin endocytosis and recycling
  • Aif1
  • Atp6ap1
  • Atp6b2
  • Atp6c
  • Atp6ip1
  • Atp6l
  • Atp6n1
  • Atp6s1
  • Atp6s14
  • Atp6v0a1
  • Atp6v0a4
  • Atp6v0b
  • Atp6v0c
  • Atp6v0d1
  • Atp6v0d2
  • Atp6v0e
  • Atp6v0e1
  • Atp6v0e2
  • Atp6v1a
  • Atp6v1b1
  • Atp6v1b2
  • Atp6v1c1
  • Atp6v1c2
  • Atp6v1d
  • Atp6v1e1
  • Atp6v1e2
  • Atp6v1f
  • Atp6v1g1
  • Atp6v1g2
  • Atp6v1g3
  • Atp6v1h
  • Atpl
  • Bat1a
  • Cdk2ap1-ps2
  • Cdk2ap1-ps3
  • Cdk2ap1-ps4
  • Cdk2ap1-ps5
  • Cdk2ap1-ps6
  • Dsr1
  • E230034O05Rik
  • Hfe
  • LOC224733l-3
  • LOC224733l-4
  • LOC224733l-5
  • LOC224733l-6
  • LOC224733l-7
  • LOC224733l-8
  • Lst1
  • Mcoln1
  • RT1-CE12
  • RT1-CE3
  • RT1-CE5
  • RT1-CE6
  • RT1-CE8
  • RT1-CE9
  • Sacm2l-ps3
  • Sacm2l-ps4
  • Sacm2l-ps5
  • Sacm2l-ps6
  • Sacm2l-ps7
  • Steap3
  • Steap4
  • Tcirg1
  • Tf
  • Tfr2
  • Tfrc
  • Tnf
  • Trfr
  • Trfr2
  • Vat2
  • Vatf
  • Vpp1
Rattus norvegicus (Norway rat)
Transfer of LPS from LBP carrier to CD14
  • Cd14
  • Lbp
Rattus norvegicus (Norway rat)
Transcriptional regulation of white adipocyte differentiation
  • Hdac3
  • Ncor2
  • Nr1c3
  • Nr2b1
  • Pparg
  • Rxra
Rattus norvegicus (Norway rat)
Transcriptional regulation by the AP-2 (TFAP2) family of transcription factors
  • Dek
  • Tcfap2a
  • Tfap2a
Rattus norvegicus (Norway rat)
Transcriptional regulation by small RNAs
  • AC109542.1
  • Aaas
  • Ago1
  • Ago2
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Eif2c2
  • Gp210
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Ipo8
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC120098305
  • LOC683983
  • LOC684797
  • Mrnp41
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Pcnt1
  • Polr2a
  • Polr2b
  • Polr2c
  • Polr2d
  • Polr2e
  • Polr2f
  • Polr2g
  • Polr2i
  • Polr2j
  • Pom121
  • Pom210
  • Rae1
  • Ran
  • Ranbp2
  • Sec13
  • Sec13l1
  • Th2b
  • Tmem48
  • Tnrc6a
  • Tpr
Rattus norvegicus (Norway rat)
Transcriptional and post-translational regulation of MITF-M expression and activity
  • Aimp1
  • Aimp2
  • Cbp
  • Crebbp
  • Crm1
  • Dars
  • Dars1
  • Drs1
  • Eef1e1
  • Eprs
  • Eprs1
  • Erk1
  • Erk2
  • Gsk3b
  • Hint
  • Hint1
  • Iars1
  • Jtv1
  • KIT
  • Kars
  • Kars1
  • Kit
  • Kitl
  • Kitlg
  • Lars
  • Lars1
  • Mapk
  • Mapk1
  • Mapk3
  • Mapkapk1a
  • Mars1
  • Mgf
  • Mitf
  • Pkci1
  • Prkm1
  • Prkm3
  • Qars
  • Qars1
  • Rars
  • Rars1
  • Rps6ka1
  • Rsk1
  • Wnt3a
  • Xpo1
Rattus norvegicus (Norway rat)

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