GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **901 - 925** of **1070** in total

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Pathway Name	Protein Name	UniProt ID ▲	Gene Symbol	Organism
VEGF binds to VEGFR leading to receptor dimerization	Placenta growth factor Vascular endothelial growth factor A Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D Vascular endothelial growth factor receptor 1 Vascular endothelial growth factor receptor 2 Vascular endothelial growth factor receptor 3	O08775 O35251 O35485 O35757 P16612 P53767 Q63434 Q91ZT1	Figf Flk1 Flt-1 Flt-4 Flt1 Flt4 Kdr Pgf Plgf Vegf Vegfa Vegfb Vegfc Vegfd Vegfr1 Vegfr3 Vrf	Rattus norvegicus (Norway rat)
Neurophilin interactions with VEGF and VEGFR	Neuropilin-1 Neuropilin-2 Vascular endothelial growth factor receptor 1 Vascular endothelial growth factor receptor 2	O08775 O35276 P53767 Q9QWJ9	Flk1 Flt-1 Flt1 Kdr Nrp1 Nrp2 Vegfr1	Rattus norvegicus (Norway rat)
VEGFR2 mediated cell proliferation	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 3-phosphoinositide-dependent protein kinase 1 GTPase HRas GTPase KRas GTPase NRas Protein kinase C alpha type Protein kinase C beta type Protein kinase C delta type Protein kinase C zeta type Proto-oncogene tyrosine-protein kinase Src Ras GTPase-activating protein 1 Sphingosine kinase 1 Vascular endothelial growth factor A Vascular endothelial growth factor receptor 2	O08775 O55173 P05696 P08644 P09215 P09217 P10686 P16612 P20171 P50904 P68403 Q04970 Q91V26 Q9WUD9	Flk1 Hras Hras1 Kdr Kras Kras2 Nras Pdk1 Pdpk1 Pkca Pkcb Pkcd Pkcz Plcg1 Prkca Prkcb Prkcb1 Prkcd Prkcz Rasa Rasa1 Sphk1 Src Vegf Vegfa	Rattus norvegicus (Norway rat)
Proton/oligopeptide cotransporters	Solute carrier family 15 member 1 Solute carrier family 15 member 2 Solute carrier family 15 member 3 Solute carrier family 15 member 4	O09014 P51574 Q63424 Q924V4	Pept1 Pept2 Pht1 Pht2 Slc15a1 Slc15a2 Slc15a3 Slc15a4	Rattus norvegicus (Norway rat)
Sulfur amino acid metabolism	Adenosylhomocysteinase Betaine--homocysteine S-methyltransferase 1 Methionine synthase reductase Methionine synthase S-adenosylmethionine synthase isoform type-1 S-methylmethionine--homocysteine S-methyltransferase BHMT2	O09171 P10760 P13444 Q498R1 Q68FT5 Q9Z2Q4	Ahcy Ams1 Bhmt Bhmt2 Mat1a Mtr Mtrr	Rattus norvegicus (Norway rat)
Choline catabolism	Alpha-aminoadipic semialdehyde dehydrogenase Betaine--homocysteine S-methyltransferase 1 Choline dehydrogenase, mitochondrial Choline transporter-like protein 1 Dimethylglycine dehydrogenase, mitochondrial Sarcosine dehydrogenase, mitochondrial	O09171 Q63342 Q64057 Q64380 Q6UPE0 Q8VII6	Ald7a1 Aldh7a1 Bhmt Cd92 Cdw92 Chdh Ctl1 Dmgdh Sardh Slc44a1	Rattus norvegicus (Norway rat)
BH3-only proteins associate with and inactivate anti-apoptotic BCL-2 members	BH3-interacting domain death agonist Bcl-2-like protein 11 Bcl-2-like protein 1 Bcl2-associated agonist of cell death Phorbol-12-myristate-13-acetate-induced protein 1	O35147 O88498 P53563 Q5U777 Q9JLT6	Bad Bcl2l1 Bcl2l11 Bclx Bid Bim Blc2l Bod Noxa Pmaip1	Rattus norvegicus (Norway rat)
Synthesis of IPs in the ER lumen	Multiple inositol polyphosphate phosphatase 1	O35217	Minpp1	Rattus norvegicus (Norway rat)
VEGF ligand-receptor interactions	Placenta growth factor Vascular endothelial growth factor A Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D	O35251 O35485 O35757 P16612 Q63434	Figf Pgf Plgf Vegf Vegfa Vegfb Vegfc Vegfd Vrf	Rattus norvegicus (Norway rat)
Golgi Cisternae Pericentriolar Stack Reorganization	Golgi reassembly-stacking protein 1 Golgi reassembly-stacking protein 2 Golgin subfamily A member 2 Golgin-45 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Ras-related protein Rab-1A Ras-related protein Rab-1B Ras-related protein Rab-2A Serine/threonine-protein kinase PLK1	O35254 P05712 P10536 P21708 P63086 Q62673 Q62839 Q6AYB8 Q6NYB7 Q9R064	Blzf1 Erk1 Erk2 Golga2 Gorasp1 Gorasp2 Grasp65 Mapk Mapk1 Mapk3 Plk Plk1 Prkm1 Prkm3 Rab1 Rab1A Rab1b Rab2 Rab2a	Rattus norvegicus (Norway rat)
Breakdown of the nuclear lamina	Caspase-6 Lamin-B1 Prelamin-A/C	O35397 P48679 P70615	Casp6 Lmn1 Lmna Lmnb1 Mch2	Rattus norvegicus (Norway rat)
GABA synthesis, release, reuptake and degradation	Complexin-1 DnaJ homolog subfamily C member 5 Glutamate decarboxylase 1 Glutamate decarboxylase 2 Heat shock cognate 71 kDa protein Ras-related protein Rab-3A Regulating synaptic membrane exocytosis protein 1 Synaptosomal-associated protein 25 Synaptotagmin-1 Syntaxin-1A Syntaxin-binding protein 1 Vesicle-associated membrane protein 2 Vesicular inhibitory amino acid transporter	O35458 P18088 P21707 P32851 P60881 P60905 P61765 P63012 P63018 P63041 P63045 Q05683 Q9JIR4	Cplx1 Dnajc5 Gad1 Gad2 Gad65 Gad67 Hsc70 Hsc73 Hspa8 Rab3a Rim1 Rims1 Sap Slc32a1 Snap Snap25 Stx1a Stxbp1 Syb2 Syt1 Unc18a Vamp2 Vgat Viaat	Rattus norvegicus (Norway rat)
Intracellular metabolism of fatty acids regulates insulin secretion	Fatty acid CoA ligase Acsl3 Long-chain-fatty-acid--CoA ligase 4 Platelet glycoprotein 4	O35547 Q07969 Q63151	Acs3 Acs4 Acsl3 Acsl4 Cd36 Facl3 Facl4 Fat	Rattus norvegicus (Norway rat)
GRB7 events in ERBB2 signaling	Growth factor receptor-bound protein 7 Pro-neuregulin-1, membrane-bound isoform Pro-neuregulin-2, membrane-bound isoform Receptor tyrosine-protein kinase erbB-2 Receptor tyrosine-protein kinase erbB-3	O35569 P06494 P43322 Q62799 Q9QZC5	Erbb2 Erbb3 Grb7 Ndf Neu Nrg1 Nrg2 Ntak	Rattus norvegicus (Norway rat)
Proton-coupled monocarboxylate transport	Basigin Embigin Monocarboxylate transporter 1 Monocarboxylate transporter 2 Monocarboxylate transporter 3 Monocarboxylate transporter 4	O35910 O70461 O88775 P26453 P53987 Q63344	Bsg Emb Gp70 Mct1 Mct2 Mct3 Mct4 Slc16a1 Slc16a3 Slc16a7 Slc16a8	Rattus norvegicus (Norway rat)
Transport of organic anions	Monocarboxylate transporter 8 Solute carrier organic anion transporter family member 1A4 Solute carrier organic anion transporter family member 1B2 Solute carrier organic anion transporter family member 1C1 Solute carrier organic anion transporter family member 2A1 Solute carrier organic anion transporter family member 2B1 Solute carrier organic anion transporter family member 3A1 Solute carrier organic anion transporter family member 4A1 Solute carrier organic anion transporter family member 4C1 Vasopressin-neurophysin 2-copeptin	O35913 P01186 Q00910 Q71MB6 Q8K1P8 Q99N01 Q99N02 Q9EPZ7 Q9JHI3 Q9QZX8	Avp Bsat1 Matr1 Mct8 Oatp1a4 Oatp1b2 Oatp1c1 Oatp2 Oatp2b1 Oatp3a1 Oatp4a1 Oatp4c1 Oatpd Oatpe Oatpf Pgt2 SLC16A2 Slc21a10 Slc21a11 Slc21a12 Slc21a14 Slc21a2 Slc21a20 Slc21a5 Slc21a9 Slco1a4 Slco1b2 Slco1c1 Slco2a1 Slco2b1 Slco3a1 Slco4a1 Slco4c1	Rattus norvegicus (Norway rat)
Ciprofloxacin ADME	Albumin Broad substrate specificity ATP-binding cassette transporter ABCG2 Solute carrier family 22 member 1 Solute carrier organic anion transporter family member 1A4	O35913 P02770 Q63089 Q80W57	Abcg2 Alb Bcrp1 Oatp1a4 Oatp2 Oct1 Slc21a5 Slc22a1 Slco1a4	Rattus norvegicus (Norway rat)
Prostanoid ligand receptors	Prostacyclin receptor Prostaglandin D2 receptor 2 Prostaglandin D2 receptor-like Prostaglandin D2 receptor Prostaglandin E2 receptor EP1 subtype Prostaglandin E2 receptor EP2 subtype Prostaglandin E2 receptor EP3 subtype Prostaglandin E2 receptor EP4 subtype Prostaglandin F2-alpha receptor Thromboxane A2 receptor	O35932 P34978 P34980 P43114 P43118 P43253 P70597 Q62928 Q6XKD3 Q9R261	Crth2 Gpr44 Ptgdr Ptgdr2 Ptgdrl Ptger1 Ptger2 Ptger3 Ptger4 Ptgfr Ptgir Tbxa2r	Rattus norvegicus (Norway rat)
Organic anion transport	Organic anion transporter 3 Solute carrier family 22 member 12 Solute carrier family 22 member 6 Solute carrier family 22 member 7	O35956 Q3ZAV1 Q5RLM2 Q9R1U7	Nlt Oat1 Oat2 Oat3 Slc22a12 Slc22a6 Slc22a7 Slc22a8 Urat1	Rattus norvegicus (Norway rat)
TWIK-releated acid-sensitive K+ channel (TASK)	Potassium channel subfamily K member 3 Potassium channel subfamily K member 9	O54912 Q9ES08	Kcnk3 Kcnk9 Task Task1 Task3	Rattus norvegicus (Norway rat)
Estrogen-stimulated signaling through PRKCZ	3-phosphoinositide-dependent protein kinase 1 GTPase HRas GTPase KRas GTPase NRas Mitogen-activated protein kinase 1 Protein kinase C zeta type	O55173 P08644 P09217 P20171 P63086 Q04970	Erk2 Hras Hras1 Kras Kras2 Mapk Mapk1 Nras Pdk1 Pdpk1 Pkcz Prkcz Prkm1	Rattus norvegicus (Norway rat)
Activation of PKB	3-phosphoinositide-dependent protein kinase 1 Acyl-coenzyme A thioesterase THEM4 RAC-beta serine/threonine-protein kinase Tribbles homolog 3	O55173 P47197 Q566R0 Q9WTQ6	Akt2 Nipk Pdk1 Pdpk1 Them4 Trib3	Rattus norvegicus (Norway rat)
Signaling by Activin	Activin receptor type-1B Activin receptor type-1C Activin receptor type-2A Activin receptor type-2B Inhibin alpha chain Inhibin beta A chain Inhibin beta B chain Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Transforming growth factor beta receptor type 3	O70436 O70437 P17490 P17491 P18331 P21708 P26342 P38444 P38445 P63086 P70539 P80202 P84025	Actrii Actriib Acvr1b Acvr1c Acvr2 Acvr2a Acvr2b Acvrlk4 Alk4 Alk7 Erk1 Erk2 Inha Inhba Inhbb Madh2 Madh3 Madh4 Mapk Mapk1 Mapk3 Prkm1 Prkm3 Smad2 Smad3 Smad4 Tgfbr3	Rattus norvegicus (Norway rat)
Abacavir transmembrane transport	Solute carrier family 22 member 1 Solute carrier family 22 member 2 Solute carrier family 22 member 3	O88446 Q63089 Q9R0W2	Oct1 Oct2 Oct3 Slc22a1 Slc22a2 Slc22a3	Rattus norvegicus (Norway rat)
Activation of BIM and translocation to mitochondria	Bcl-2-like protein 11 Dynein light chain 1, cytoplasmic Mitogen-activated protein kinase 8	O88498 P49185 P63170	Bcl2l11 Bim Bod Dncl1 Dnclc1 Dynll1 Jnk1 Mapk8 Pin Prkm8	Rattus norvegicus (Norway rat)

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