GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 926 - 950 of 1070 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
MET interacts with TNS proteins
  • Hgf
  • Itgb1
  • Met
  • Tns3
  • Tns4
Rattus norvegicus (Norway rat)
MET activates STAT3
  • Hgf
  • Met
  • Stat3
Rattus norvegicus (Norway rat)
Drug-mediated inhibition of MET activation
  • Hgf
  • Met
Rattus norvegicus (Norway rat)
Sema4D mediated inhibition of cell attachment and migration
  • Arha
  • Arha2
  • Arhgap35
  • Grlf1
  • Met
  • P190A
  • Plxnb1
  • Rac
  • Rac1
  • Rhoa
  • Rnd1
  • Rras
  • Sema4d
  • p190ARHOGAP
Rattus norvegicus (Norway rat)
Fc epsilon receptor (FCERI) signaling
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000070986
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Fce1a
  • Fce1b
  • Fce1g
  • Fcer1a
  • Fcer1b
  • Fcer1g
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Lat
  • Lyn
  • Ms4a2
  • RGD1561722
  • RGD1564696
  • Syk
Rattus norvegicus (Norway rat)
Histamine receptors
  • Hrh1
  • Hrh2
  • Hrh3
  • Hrh4
Rattus norvegicus (Norway rat)
Phosphorylation of CD3 and TCR zeta chains
  • AABR07044416.1
  • Arrb2-ps
  • Cbp
  • Cd247
  • Cd3d
  • Cd3e
  • Cd3g
  • Cd4
  • Csk
  • DA1
  • Db2
  • ENSRNOG00000065769
  • ENSRNOG00000065908
  • ENSRNOG00000065955
  • ENSRNOG00000070909
  • H2-Ea
  • Hla-dma
  • Hla-dmb
  • LOC100911800
  • Lck
  • Pag
  • Pag1
  • Psmb9
  • Ptpn22
  • Ptprc
  • Ptprj
  • RT1-Ba
  • RT1-Bb
  • RT1-DOb
  • RT1-Da
  • RT1-Db1
  • RT1-Db2
  • RT1-Ha
  • RT1-Hb-ps1
  • T3d
  • Tap1
  • Tap2
  • Tesb
  • Trbv16
Rattus norvegicus (Norway rat)
Translocation of ZAP-70 to Immunological synapse
  • AABR07044416.1
  • Arrb2-ps
  • Cd247
  • Cd3d
  • Cd3e
  • Cd3g
  • Cd4
  • DA1
  • Db2
  • ENSRNOG00000065769
  • ENSRNOG00000065908
  • ENSRNOG00000065955
  • ENSRNOG00000070909
  • H2-Ea
  • Hla-dma
  • Hla-dmb
  • LOC100911800
  • Lck
  • Psmb9
  • Ptpn22
  • RT1-Ba
  • RT1-Bb
  • RT1-DOb
  • RT1-Da
  • RT1-Db1
  • RT1-Db2
  • RT1-Ha
  • RT1-Hb-ps1
  • T3d
  • Tap1
  • Tap2
  • Tesb
  • Trbv16
  • Zap70
Rattus norvegicus (Norway rat)
SIRT1 negatively regulates rRNA expression
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Rrp8
  • Sirt1
  • Suv39h1
  • Th2b
Rattus norvegicus (Norway rat)
Assembly of the ORC complex at the origin of replication
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Kpna1
  • Kpna6
  • Kpnb1
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Orc1
  • Orc1l
  • Orc2
  • Orc2l
  • Orc3
  • Orc3l
  • Orc4
  • Orc4l
  • Orc5
  • Orc6
  • Th2b
Rattus norvegicus (Norway rat)
RNA Polymerase I Promoter Opening
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Erk1
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Mapk3
  • Mbd2
  • Prkm3
  • Tcfubf
  • Th2b
  • Ubf-1
  • Ubtf
Rattus norvegicus (Norway rat)
NoRC negatively regulates rRNA expression
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Mbd2
  • Th2b
Rattus norvegicus (Norway rat)
Notch-HLH transcription pathway
  • Cbp
  • Crebbp
  • HDAC9
  • Hdac1
  • Hdac10
  • Hdac11
  • Hdac2
  • Hdac3
  • Hdac4
  • Hdac5
  • Hdac8
  • Hdac9
  • Kat2a
  • Kat2b
  • LOC687001
  • Maml1
  • Maml2
  • Maml3
  • Ncor2
  • Notch3
  • Rbpj
  • Snw1
  • Tbl1x
  • Tbl1xr1
Rattus norvegicus (Norway rat)
RUNX3 regulates NOTCH signaling
  • Cbp
  • Crebbp
  • Ep300
  • Kat2a
  • Kat2b
  • Maml1
  • Maml2
  • Maml3
  • Rbpj
  • Runx3
  • Snw1
Rattus norvegicus (Norway rat)
YAP1- and WWTR1 (TAZ)-stimulated gene expression
  • Kat2b
  • Tbx5
  • Tead1
  • Tead2
  • Tead3
  • Tead4
  • Wwtr1
  • Yap
  • Yap1
  • Yap65
Rattus norvegicus (Norway rat)
Transcriptional regulation of white adipocyte differentiation
  • Hdac3
  • Ncor2
  • Nr1c3
  • Nr2b1
  • Pparg
  • Rxra
Rattus norvegicus (Norway rat)
Nuclear events mediated by NFE2L2
  • Cbp
  • Crebbp
  • Ep300
  • Nfe2l2
  • Nrf2
Rattus norvegicus (Norway rat)
Orexin and neuropeptides FF and QRFP bind to their respective receptors
  • Gpr147
  • Gpr74
  • Hcrt
  • Hcrtr1
  • Hcrtr2
  • Npff
  • Npff1
  • Npff2
  • Npffr1
  • Npffr2
  • Npgpr
  • Ox
  • P518
  • Ppox
  • Qrfp
  • Qrfprl
  • RGD1560028
Rattus norvegicus (Norway rat)
PTK6 promotes HIF1A stabilization
  • Dtr
  • Egfr
  • Gpnmb
  • Hbegf
  • Hegfl
  • Hif1a
  • Lrrk2
  • Ptk6
Rattus norvegicus (Norway rat)
Activation of IRF3, IRF7 mediated by TBK1, IKKε (IKBKE)
  • Cd14
  • Ikbke
  • Irf3
  • Irf7
  • LOC100360645
  • Ly96
  • Optn
  • Plin3
  • Ptpn11
  • Rps27a
  • Sarm1
  • Tank
  • Tbk1
  • Ticam1
  • Ticam2
  • Tlr4
  • Traf3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Negative regulators of RIG-I/MDA5 signaling
  • Cyld
  • Cyld1
  • Ikbke
  • Ips1
  • Irf3
  • LOC100360645
  • Mavs
  • Nlrx1
  • Pin1
  • Rig1
  • Rps27a
  • Tax1bp1
  • Tbk1
  • Tnfaip3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Visa
Rattus norvegicus (Norway rat)
Regulation of TBK1, IKKε (IKBKE)-mediated activation of IRF3, IRF7
  • Cd14
  • Ikbke
  • LOC100360645
  • Ly96
  • Optn
  • Plin3
  • Rps27a
  • Tank
  • Tbk1
  • Ticam1
  • Ticam2
  • Tlr4
  • Traf3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
RIP-mediated NFkB activation via ZBP1
  • Chuk
  • Dhx9
  • Ikba
  • Ikbb
  • Ikbkb
  • Ikbkg
  • Ikkb
  • Myd88
  • Nemo
  • Nfkb2
  • Nfkbia
  • Nfkbib
  • Nkiras1
  • Nkiras2
  • Rela
Rattus norvegicus (Norway rat)
Elevation of cytosolic Ca2+ levels
  • Insp3r
  • Itpr1
  • Itpr2
  • Itpr3
  • P2rx1
  • P2rx2
  • P2rx3
  • P2rx4
  • P2rx5
  • P2rx6
  • P2rx7
  • P2rxl1
  • Trpc3
  • Trpc7
  • Trrp3
Rattus norvegicus (Norway rat)
Synthesis of IP2, IP, and Ins in the cytosol
  • Aldrl6
  • Imp
  • Impa1
  • Impa2
  • Ino1
  • Inpp1
  • Inpp4a
  • Inpp4b
  • Inpp5a
  • Inpp5b
  • Inpp5j
  • Isyna1
  • Ksp32
  • Miox
  • Ocrl
  • Pib5pa
  • Pipp
  • Rsor
  • Synj1
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024