GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 126 - 150 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▼ GlyTouCan ID
Beta oxidation of butanoyl-CoA to acetyl-CoA
  • Acads
  • Echs1
  • Had
  • Hadh
  • Hadhsc
  • Schad
Rattus norvegicus (Norway rat)
Asparagine N-linked glycosylation
  • Asgr-1
  • Asgr-2
  • Asgr1
  • Asgr2
  • B4galnt2
  • Umod
Rattus norvegicus (Norway rat)
Acyl chain remodeling of CL
  • Cpla2
  • Hadha
  • Hadhb
  • Lclat1
  • Pla2g4
  • Pla2g4a
  • TAZ
  • Tafazzin
Rattus norvegicus (Norway rat)
Endosomal/Vacuolar pathway
  • 1700031A10Rik
  • 2781a1
  • 2788a1a2
  • 2795a1
  • 2800a1a2
  • 2812a1a2
  • 2824a1
  • 2829a1a2
  • 2846a1a2
  • 2860a1
  • 2865a2
  • 2869a1a2
  • 2879a1
  • 2886a1-a1a2
  • 2901a1a2
  • 2906a1
  • 2920a1a2
  • 2927a1
  • 2941a1a2
  • 2945a1a2
  • 2950a1
  • 2953a1a2
  • 2959a1
  • 2976a1
  • 2981a1a2
  • 2984a1a2
  • 2994a1
  • 3082ex4-5
  • 3252a3
  • 3258a2
  • 3281a3
  • 3298a3
  • AABR07044308.2
  • AABR07044362.1
  • AABR07072807.1
  • AC120486.1
  • B2m
  • ENSRNOG00000064836
  • ENSRNOG00000069480
  • H2-M10.6
  • H2-M10.6l
  • Irap
  • LOC102546590
  • LOC120093125
  • Lnpep
  • Nerg-ps11
  • Nerg-ps12
  • Nerg-ps13
  • Nerg-ps14
  • Nerg-ps15
  • Otase
  • Pbp-ps
  • Ppid-ps
  • Ppp1cb-ps
  • RT1-A1
  • RT1-A2
  • RT1-CE1
  • RT1-CE11
  • RT1-CE14
  • RT1-CE16
  • RT1-CE2
  • RT1-M1-1
  • RT1-M1-2
  • RT1-M1-3
  • RT1-M1-4
  • RT1-M1-5
  • RT1-M10-1
  • RT1-M10-2
  • RT1-M10-3
  • RT1-M10-4
  • RT1-M2
  • RT1-M3-1
  • RT1-M5
  • RT1-M7
  • RT1-M8
  • RT1-N3
  • RT1-O1l1
  • RT1-P2
  • RT1-S3
  • Rcrg1-ps25
  • Rcrg1-ps26
  • Rcrg1-ps27
  • Rcrg1-ps28
  • Rcrg1-ps29
  • Rcrg1-ps30
  • Rcrg1-ps31
  • Rcrg1-ps32
  • Rcrg1-ps33
  • Rcrg1-ps34
  • Rcrg1-ps35
  • Rcrg1-ps36
  • Rcrg1-ps37
  • Rcrg1-ps38
  • Rcrg1-ps39
  • Rcrg1-ps40
  • Rpl39-ps
  • Trim15
  • Trim31
  • Trim39-ps
Rattus norvegicus (Norway rat)
Organic anion transport
  • Nlt
  • Oat1
  • Oat2
  • Oat3
  • Slc22a12
  • Slc22a6
  • Slc22a7
  • Slc22a8
  • Urat1
Rattus norvegicus (Norway rat)
Activation of C3 and C5
  • C2
  • C3
  • C4
  • C4a
  • C4b
  • C5
  • Cfb
Rattus norvegicus (Norway rat)
Synthesis of PE
  • Cept1
  • Chetk
  • Chk
  • Chka
  • Chkb
  • Chkl
  • Ckr
  • Ept1
  • Etnk1
  • Etnk2
  • Etnppl
  • LOC687071
  • Lpin1
  • Lpin2
  • Lpin3
  • Pcyt2
  • Phospho1
  • Selenoi
Rattus norvegicus (Norway rat)
EGFR downregulation
  • Areg
  • Arhgef7
  • Ash
  • Btc
  • Cbl
  • Cdc42
  • Dtr
  • Egf
  • Egfr
  • Epn1
  • Eps15
  • Eps15l1
  • Ereg
  • Grb2
  • Hbegf
  • Hegfl
  • Hgs
  • Hrs
  • Hrs2
  • LOC100360645
  • Pak3bp
  • Pixb
  • Ptpn12
  • Ptpn3
  • Rps27a
  • Ruk
  • Sdgf
  • Seta
  • Sh3d2a
  • Sh3d2c1
  • Sh3gl1
  • Sh3gl2
  • Sh3gl3
  • Sh3kbp1
  • Sh3p13
  • Sh3p4
  • Sh3p8
  • Spry1
  • Spry2
  • Stam
  • Stam2
  • Tgfa
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Assembly of the pre-replicative complex
  • Anapc1
  • Anapc15
  • Anapc16
  • Anapc2
  • Anapc4
  • Anapc5
  • Anapc7
  • Cdc16
  • Cdc23
  • Cdc26
  • Cdc27
  • Cdt1
  • Fzr1
  • Gmnn
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • LOC100366017
  • Lmp10
  • Lmp2
  • Mcm2
  • Mcm3
  • Mcm4
  • Mcm5
  • Mecl1
  • Mss1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psmf1
  • Ring12
  • Rps27a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ube2c
  • Ube2d1
  • Ube2e1
  • Ube2s
Rattus norvegicus (Norway rat)
Transport of Mature mRNA derived from an Intron-Containing Transcript
  • AABR07026797.1
  • Aaas
  • Alyref
  • Bat1
  • Bat1a
  • Casc3
  • Cbp20
  • Cbp80
  • Cdc40
  • Chtop
  • Cl-4
  • Ddx39
  • Ddx39a
  • Ddx39b
  • Ddx48
  • Ddxl
  • Dhx38
  • Eif4a3
  • Fmip
  • Fop
  • Fyttd1
  • Gle1
  • Gle1l
  • Gp210
  • Hcc1
  • Hrs
  • LOC683983
  • Magoh
  • Magohb
  • Mln51
  • Mrnp41
  • Ncbp1
  • Ncbp2
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Nxf1
  • Nxf2
  • Nxf5
  • Nxf7
  • Nxt1
  • Pcnt1
  • Pdrp
  • Poldip3
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Rbm8
  • Rbm8a
  • Rnps1
  • Sarnp
  • Sec13
  • Sec13l1
  • Sfrs2
  • Sfrs5
  • Sfrs9
  • Slu7
  • Srrm1
  • Srsf1
  • Srsf11
  • Srsf2
  • Srsf3
  • Srsf5
  • Srsf7
  • Srsf9
  • Tap
  • Thoc2
  • Thoc5
  • Thoc6
  • Thoc7
  • Tmem48
  • Tpr
  • U2af1
  • U2af1l4
  • U2af2
  • Uap56
  • Uif
  • Upf3b
  • wdr58
Rattus norvegicus (Norway rat)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • Cd26
  • Dpp4
  • Ffar1
  • Ffar4
  • Gcg
  • Gpr119
  • Gpr120
  • Gpr40
  • Grp
  • Lep
  • O3far1
  • Ob
Rattus norvegicus (Norway rat)
MDK and PTN in ALK signaling
  • Alk
  • Mdk
  • Ptn
  • Ptprz
  • Ptprz1
  • Ptpz
Rattus norvegicus (Norway rat)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle
  • Amfr
  • Derl1
  • Engase
  • LOC100360645
  • Ngly1
  • Psmc1
  • Rad23b
  • Rps27a
  • Saks1
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ubxn1
  • Vcp
Rattus norvegicus (Norway rat)
PRPP biosynthesis
  • ENSRNOG00000063771
  • LOC314140
  • Prps1
  • Prps1l1
  • Prps1l3
  • Prps2
Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in interleukin signaling
  • Aml1
  • Cbfa2
  • Cbfb
  • Elf1
  • Runx1
Rattus norvegicus (Norway rat)
Signalling to RAS
  • Ash
  • Grb2
  • Nshc
  • Sck
  • Shc1
  • Shc2
  • Shc3
  • Shcc
  • Sos1
Rattus norvegicus (Norway rat)
Role of LAT2/NTAL/LAB on calcium mobilization
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • Ash
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000070986
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Gab2
  • Grb2
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Lab
  • Lat2
  • Lyn
  • Ntal
  • Pdk1
  • Pdpk1
  • Pik3ca
  • Pik3cb
  • Pik3r1
  • Pik3r2
  • RGD1561722
  • RGD1564696
  • Shc1
  • Sos1
  • Syk
  • Wbscr5
Rattus norvegicus (Norway rat)
RHO GTPases activate PKNs
  • Arha
  • Arha2
  • Arhb
  • Cdc25c
  • Cpi
  • Cpi17
  • Mbs
  • Msfs1
  • Mypt1
  • Pak2
  • Pdk1
  • Pdpk1
  • Pkn
  • Pkn1
  • Pkn2
  • Ppp1cb
  • Ppp1r12a
  • Ppp1r12b
  • Ppp1r14a
  • Prk1
  • Prk2
  • Prkcl1
  • Prkcl2
  • Rac
  • Rac1
  • Rhoa
  • Rhob
  • Sfn
  • Ywhab
  • Ywhae
  • Ywhag
  • Ywhah
  • Ywhaq
  • Ywhaz
Rattus norvegicus (Norway rat)
Phospholipase C-mediated cascade: FGFR1
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf17
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr1
  • Flg
  • Kl
  • Plcg1
Rattus norvegicus (Norway rat)
Mitochondrial protein degradation
  • A4
  • AABR07056686.1
  • AC094055.1
  • AD1
  • Acad8
  • Acadsb
  • Acat1
  • Aco2
  • Acot1
  • Acot2
  • Acot3
  • Acot5
  • Afg3l2
  • Alas1
  • Aldh18a1
  • Aldh1b1
  • Aldh2
  • Aldhx
  • Ant2
  • App
  • Arg2
  • Atp5a1
  • Atp5b
  • Atp5c
  • Atp5c1
  • Atp5f1a
  • Atp5f1b
  • Atp5f1c
  • Atp5h
  • Atp5j
  • Atp5jd
  • Atp5l
  • Atp5mg
  • Atp5o
  • Atp5pd
  • Atp5pf
  • Atp5po
  • Atp6
  • Atpase6
  • Bdh
  • Bdh1
  • Clpp
  • Clpx
  • Coi
  • Cox5a
  • Cox5b
  • Cs
  • Cte1
  • Dbt
  • Dci
  • Dld
  • Ech1
  • Eci1
  • Erab
  • Fech
  • Fh
  • Fh1
  • Glud
  • Glud1
  • Grp75
  • Had
  • Hadh
  • Hadh2
  • Hadhsc
  • Hmgcs2
  • Hsd17b10
  • Hsp60
  • Hspa9
  • Hspa9a
  • Hspd1
  • Htra2
  • Iars2
  • Idh2
  • Idh3a
  • LOC100911483
  • Ldhd
  • Lon
  • Lonp1
  • Mdh2
  • Me2
  • Mnadk
  • Mor1
  • Mppa
  • Mrpl12
  • Mrpl32
  • Mrps10
  • Mrps2
  • Mt-atp6
  • Mt-co1
  • Mtatp6
  • Mtco1
  • Mte1
  • Nadk2
  • Nadkd1
  • Ndufa13
  • Ndufa2
  • Ndufs1
  • Ndufs3
  • Ndufv1
  • Ndufv3
  • Ogdh
  • Ogdhl
  • Oxct
  • Oxct1
  • Oxsm
  • Pccb
  • Pdh
  • Pdha1l1
  • Pdhb
  • Pdk1
  • Peo1
  • Pmpca
  • Prkaca
  • Prss15
  • Qpc
  • SUCLG2
  • Schad
  • Scot
  • Shmt2
  • Slc25a5
  • Smdt1
  • Spg7
  • Ssbp
  • Ssbp1
  • Star
  • Suclg2
  • Tfam
  • Twnk
  • Uqcrc2
  • Uqcrq
Rattus norvegicus (Norway rat)
LDL remodeling
  • Mtp
  • Mttp
  • P4hb
  • Pdia1
Rattus norvegicus (Norway rat)
ADP signalling through P2Y purinoceptor 1
  • Cpla2
  • Csbp1
  • Csbp2
  • Gna11
  • Gna14
  • Gna15
  • Gnaq
  • Mapk14
  • P2ry1
  • Pla2g4
  • Pla2g4a
  • Src
Rattus norvegicus (Norway rat)
Regulation of PTEN stability and activity
  • Akt1
  • Akt2
  • Akt3
  • Api3
  • Birc4
  • Ck2n
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Frk
  • Gask
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mkrn1
  • Mss1
  • Nedd4
  • Nedd4a
  • Otud3
  • Prex2
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Pten
  • Ring12
  • Rnf146
  • Rpf1
  • Rps27a
  • Sug1
  • Tbp1
  • Tbp7
  • Tnks
  • Tnks2
  • Trim27
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Usp13
  • Wwp2
  • Xiap
Rattus norvegicus (Norway rat)
Biosynthesis of maresin-like SPMs
  • Cyp1a-2
  • Cyp1a2
  • Cyp2c66
  • Cyp2d-18
  • Cyp2d-4
  • Cyp2d18
  • Cyp2d4
  • Cyp2e
  • Cyp2e-1
  • Cyp2e1
  • Cyp3a-1
  • Cyp3a-2
  • Cyp3a1
  • Cyp3a11
  • Cyp3a13
  • Cyp3a18
  • Cyp3a2
  • Cyp3a62
  • Cyp3a9
  • LOC100912265
Rattus norvegicus (Norway rat)
PINK1-PRKN Mediated Mitophagy
  • Apg12l
  • Atg12
  • Atg5
  • Fzo1a
  • Fzo1b
  • LOC100360645
  • Map1alc3
  • Map1lc3
  • Map1lc3a
  • Map1lc3b
  • Mfn1
  • Mfn2
  • Mterf3
  • Mterfd1
  • Park2
  • Pink1
  • Prkn
  • Rps27a
  • Sqstm1
  • Tom22
  • Tom40
  • Tom40a
  • Tomm20
  • Tomm22
  • Tomm40
  • Tomm5
  • Tomm7
  • Tomm70
  • Tomm70a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vdac1
  • Zip
Rattus norvegicus (Norway rat)

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