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Alliance of Genome Resources

Alliance of Genome Resources is a gene dataset, which contains curated genome information essential for the understanding of the genetics and genomic basis of human biology, health and disease. All data is retrieved from six major model organism databases and the Gene Ontology including FlyBase, Mouse Genome Database (MGI), Rat Genome Database (RGD), Saccharomyces Genome Database (SGD), WormBase, Zebrafish Information Network (ZFIN), and the GO Consortium. In GlyCosmos, only glycan-related disease information has been extracted from Alliance of Genome Resources.

Source	Last Updated
Alliance of Genome Resources	October 9, 2024

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Disease ID	Disease Name	Alliance of Genome Resources ID	Species	Gene ID	Gene Symbol	Evidence Code Names ▼	References
DOID:10283	prostate cancer	HGNC:644	Homo sapiens (human)	367	AR	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:12394768 PMID:15479493 PMID:17049844 PMID:18158066
DOID:5419	schizophrenia	HGNC:4617	Homo sapiens (human)	2932	GSK3B	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:14745448 PMID:15254796 PMID:16397405
DOID:684	hepatocellular carcinoma	HGNC:11730	Homo sapiens (human)	7015	TERT	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:17175353 PMID:23907815 PMID:25123086 PMID:25339005 PMID:25683523 PMID:26575952 PMID:28416747
DOID:9074	systemic lupus erythematosus	HGNC:3616	Homo sapiens (human)	2212	FCGR2A	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:11561111 PMID:14747618 PMID:17092257 PMID:17557887 PMID:18204446 PMID:21719445 PMID:8254199 RGD:7240710
DOID:2841	asthma	HGNC:6016	Homo sapiens (human)	3567	IL5	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:15502111 PMID:18629290 PMID:22186238 PMID:9493449
DOID:0050741	alcohol dependence	HGNC:9201	Homo sapiens (human)	5443	POMC	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:14634483 PMID:20191296 PMID:24035285 PMID:30597578 PMID:31329297 PMID:9426836
DOID:14330	Parkinson's disease	HGNC:5244	Homo sapiens (human)	3313	HSPA9	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:16565515 PMID:18219256 PMID:19657588 PMID:20817635
DOID:6432	pulmonary hypertension	HGNC:1078	Homo sapiens (human)	659	BMPR2	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion	MGI:6194238 PMID:15775752 PMID:19324947 PMID:19785764 PMID:20002458 PMID:20534176 PMID:21737550
DOID:1612	breast cancer	HGNC:1100	Homo sapiens (human)	672	BRCA1	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion mutant phenotype evidence used in manual assertion	MGI:6194238 PMID:17384678 PMID:18204050 PMID:18269736 PMID:27211102 PMID:7907678 PMID:9167459
DOID:14330	Parkinson's disease	HGNC:11138	Homo sapiens (human)	6622	SNCA	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion mutant phenotype evidence used in manual assertion	MGI:6194238 PMID:10651022 PMID:10678833 PMID:17448146 PMID:18178617 PMID:18625222 PMID:9197268 PMID:9462735
DOID:12802	mucopolysaccharidosis I	HGNC:5391	Homo sapiens (human)	3425	IDUA	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion mutant phenotype evidence used in manual assertion	MGI:6194238 PMID:11172140 PMID:12948739 PMID:1301196 PMID:1301941 PMID:15126990 PMID:15128896 PMID:15194053 PMID:16435195 PMID:16860035 PMID:17407189 PMID:17606547 PMID:18523448 PMID:21734815 PMID:24100243 PMID:25597593 PMID:27146977 PMID:7951228 PMID:8664897
DOID:0080301	atypical hemolytic-uremic syndrome	HGNC:4883	Homo sapiens (human)	3075	CFH	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion mutant phenotype evidence used in manual assertion	MGI:6194238 PMID:10577907 PMID:17517971 PMID:20513133 PMID:23243267 PMID:9811382 RGD:7240710
DOID:1440	Machado-Joseph disease	HGNC:7106	Homo sapiens (human)	4287	ATXN3	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion mutant phenotype evidence used in manual assertion	MGI:6194238 PMID:18385100 PMID:18841197 PMID:20308049 PMID:7874163 PMID:9804376 RGD:7240710
DOID:0050431	arrhythmogenic right ventricular cardiomyopathy	HGNC:3049	Homo sapiens (human)	1829	DSG2	direct assay evidence used in manual assertion evidence used in automatic assertion expression pattern evidence used in manual assertion inference by association of genotype from phenotype used in manual assertion mutant phenotype evidence used in manual assertion	MGI:6194238 PMID:24086444 PMID:30239670 PMID:30304392 PMID:30454721
DOID:10907	microcephaly	ZFIN:ZDB-GENE-041114-166	Danio rerio (zebrafish)	492810	mfsd2aa	curator inference used in manual assertion	PMID:26005868
DOID:0050560	Walker-Warburg syndrome	ZFIN:ZDB-GENE-060929-1018	Danio rerio (zebrafish)	557187	rxylt1	curator inference used in manual assertion	PMID:27130732
DOID:0050570	congenital disorder of glycosylation type I	ZFIN:ZDB-GENE-040801-115	Danio rerio (zebrafish)	445202	dpm1	curator inference used in manual assertion	PMID:26729507
DOID:10584	retinitis pigmentosa	ZFIN:ZDB-GENE-130530-959	Danio rerio (zebrafish)	557044	eys	curator inference used in manual assertion	PMID:33514863
DOID:5419	schizophrenia	ZFIN:ZDB-GENE-030616-135	Danio rerio (zebrafish)	403310	cacna1da	curator inference used in manual assertion	PMID:33057948
DOID:0080095	myofibrillar myopathy 4	FB:FBgn0265991	Drosophila melanogaster (fruit fly)	36740	Zasp52	combinatorial experimental and curator inference evidence used in manual assertion evidence used in automatic assertion	MGI:6194238 PMID:31746737
DOID:0110721	neuronal ceroid lipofuscinosis 1	FB:FBgn0030057	Drosophila melanogaster (fruit fly)	31805	Ppt1	combinatorial experimental and curator inference evidence used in manual assertion evidence used in automatic assertion	MGI:6194238 PMID:16452138 PMID:21203506
DOID:0110184	Charcot-Marie-Tooth disease type 4J	FB:FBgn0031611	Drosophila melanogaster (fruit fly)	33658	FIG4	combinatorial experimental and curator inference evidence used in manual assertion evidence used in automatic assertion	MGI:6194238 PMID:31704059
DOID:0080139	multiple congenital anomalies-hypotonia-seizures syndrome 2	FB:FBgn0034270	Drosophila melanogaster (fruit fly)	37020	PIG-A	combinatorial experimental and curator inference evidence used in manual assertion evidence used in automatic assertion	MGI:6194238 PMID:38124489
DOID:0070489	classic dopamine transporter deficiency syndrome	FB:FBgn0034136	Drosophila melanogaster (fruit fly)	36849	DAT	combinatorial experimental and curator inference evidence used in manual assertion evidence used in automatic assertion	MGI:6194238 PMID:27481941
DOID:0110629	Wolfram syndrome 1	FB:FBgn0039003	Drosophila melanogaster (fruit fly)	42679	wfs1	combinatorial experimental and curator inference evidence used in manual assertion evidence used in automatic assertion	MGI:6194238 PMID:29357349

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