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GlyTouCan
Glycan Structure Repository
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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G01614ZM
Summary
- GlyTouCan ID
-
G01614ZM
- IUPAC Condensed
- Neu5Ac(a2-3)Gal(b1-3)[Neu5Ac(a2-6)]GalNAc(a1-
- Motifs
- Di-sialyl T antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 965.33
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- CarbBank
- 600 601 602 604 605 606 607 608 3657 3749 4200 4457 5161 5215 7941 7942 7951 8011 8012 8013 8014 8015 8016 8017 8018 8019 13281 13571 18996 21557 21898 22442 22747 22750 22770 23361 24978 29113 30507 32227 32428 32429 35081 35742 35990 42351 44021 45096 46409
3D Structures
G30110UW
G04267XF
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Canis lupus familiaris (dog) | |
| Danio rerio (zebrafish) | |
| Friend murine leukemia virus | |
| Rattus norvegicus (Norway rat) |
Taxonomic Hierarchy
root
cellular organisms [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
R |
G01614ZM
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC3 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC1 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
KEGG BRITE Database
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P02668 | Kappa-casein | ||
| P02724 | Glycophorin-A | ||
| P02727 | Glycophorin-A | ||
| P03395 | Envelope glycoprotein (Fragment) | ||
| P03415 | Membrane protein | ||
| P04275 | von Willebrand factor | ||
| P04278 | Sex hormone-binding globulin | ||
| P04921 | Glycophorin-C | ||
| P06028 | Glycophorin-B | ||
| P06867 | Plasminogen |
GlycoEpitope
- Epitope ID
- EP0023
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- brain
- gill
- heart
- intestine
- liver
- skin gland
- testis
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 7s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:1o(6+2)6d 6:6d(5+1)7n
- WURCS
- WURCS=2.0/3,4,3/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-3/a3-b1_a6-d2_b3-c2
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 10742600 | Molecular cloning and functional expression of human ST6GalNAc II. Molecular expression in various human cultured cells | Samyn-Petit B | 2000 Apr 06 |
|
| 10536037 | Cloning and expression of a human gene encoding an N-acetylgalactosamine-alpha2,6-sialyltransferase (ST6GalNAc I): a candidate for synthesis of cancer-associated sialyl-Tn antigens | Ikehara Y | 1999 Nov 01 |
|
| 10381349 | Impaired galactosylation of core 2 O-glycans in erythrocytes of beta1,4-galactosyltransferase knockout mice | Kotani N | 1999 Jun 24 |
|
| 10406848 | Glycosylation of a CNS-specific extracellular matrix glycoprotein, tenascin-R, is dominated by O-linked sialylated glycans and 'brain-type' neutral N-glycans | Zamze S | 1999 Aug |
|
| 9442070 | The Glycosylation and Structure of Human Serum IgA1, Fab, and Fc Regions and the Role of N-Glycosylation on Fcα Receptor Interactions | Mattu TS | 1998 Jan 23 |
|
| 9492296 | Structural study of the O-linked sugar chains of human leukocyte tyrosine phosphatase CD45 | Furukawa K | 1998 Jan 15 |
|
| 9852066 | Phosphorylation and O-Glycosylation Sites of Human Chromogranin A (CGA79–439) from Urine of Patients with Carcinoid Tumors | Gadroy P | 1998 Dec 18 |
|
| 9654101 | Structural characterisation of N-linked and O-linked oligosaccharides derived from interferon-alpha2b and interferon-alpha14c produced by Sendai-virus-induced human peripheral blood leukocytes | Nyman TA | 1998 Apr 15 |
|
| 9250810 | Expression of sialosyl-T and disialosyl-T antigens in erythroid cells | Muroi K | 1997 May |
|
| 9118998 | Glycosylation analysis and protein structure determination of murine fetal antigen 1 (mFA1)--the circulating gene product of the delta-like protein (dlk), preadipocyte factor 1 (Pref-1) and stromal-cell-derived protein 1 (SCP-1) cDNAs | Krogh TN | 1997 Mar 01 |
|
PubAnnotation
