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GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
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GALAXY
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MIRAGE
G01614ZM
Summary
- GlyTouCan ID
-
G01614ZM
- IUPAC Condensed
- Neu5Ac(a2-3)Gal(b1-3)[Neu5Ac(a2-6)]GalNAc(a1-
- Motifs
- Di-sialyl T antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 965.33
External Links
- GlyConnect structure
- GlyGen
- ChEBI
- PubChem Compound
- PubChem Substance
- CarbBank
- 600 601 602 604 605 606 607 608 3657 3749 4200 4457 5161 5215 7941 7942 7951 8011 8012 8013 8014 8015 8016 8017 8018 8019 13281 13571 18996 21557 21898 22442 22747 22750 22770 23361 24978 29113 30507 32227 32428 32429 35081 35742 35990 42351 44021 45096 46409
3D Structures
G30110UW
G04267XF
Organisms
| Organisms | Evidence |
|---|---|
| Homo sapiens (human) | |
| Cricetulus griseus (Chinese hamster) | |
| Bos taurus (domestic cattle) |
Taxonomic Hierarchy
root
cellular organisms [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
R |
G01614ZM
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC3 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
R |
G01614ZM
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
benzyl |
G01614ZM
|
benzyl | |
| ST6GALNAC3 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
KEGG BRITE Database
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| B8Q179 | Glycophorin B Miltenberger subtype III | ||
| P00743 | Coagulation factor X | ||
| P00747 | Plasminogen | ||
| P01215 | Glycoprotein hormones alpha chain | ||
| P01563 | Interferon alpha-2 | ||
| P01588 | Erythropoietin | ||
| P01824 | Immunoglobulin heavy variable 4-39 | ||
| P01876 | Immunoglobulin heavy constant alpha 1 | ||
| P01880 | Immunoglobulin heavy constant delta | ||
| P02656 | Apolipoprotein C-III |
GlycoEpitope
- Epitope ID
- EP0023
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- brain
- gill
- heart
- intestine
- liver
- skin gland
- testis
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 7s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:1o(6+2)6d 6:6d(5+1)7n
- WURCS
- WURCS=2.0/3,4,3/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-3/a3-b1_a6-d2_b3-c2
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 3514617 | Membrane glycophorins in Sta blood group erythrocytes | Blumenfeld OO | 1986 Apr 25 |
|
| 3007481 | Structures of O-linked oligosaccharides present in the proteoglycans secreted by human mammary epithelial cells | Gowda DC | 1986 Apr 15 |
|
| 3967649 | Structure determination of oligosaccharides isolated from Cad erythrocyte membranes by permethylation analysis and 500-MHz 1H-NMR spectroscopy | HERKT F | 1985 Jan 02 |
|
| 4091823 | Comparative study of glycophorin A derived O-glycans from human Cad, Sd(a+) and Sd(a-) erythrocytes | Blanchard D | 1985 Dec 15 |
|
| 3935432 | Structures of the major carbohydrates of natural human interleukin-2 | CONRADT HS | 1985 Dec 02 |
|
| 6436240 | Purification and structures of oligosaccharide chains in swine trachea and Cowper's gland mucin glycoproteins | Rana S S | 1984-10-25 |
|
| 6327299 | Structural studies on the O-linked carbohydrate chains of human platelet glycocalicin | Korrel SA | 1984 May 02 |
|
| 6725284 | The structure of the carbohydrate units of human plasma galactoglycoprotein determined by 500-megahertz 1H NMR spectroscopy | Akiyama K | 1984 Jun 10 |
|
| 6714238 | The structure of sialyl-glycopeptides of the O-glycosidic type, isolated from sialidosis (mucolipidosis I) urine | Lecat D | 1984 Apr 16 |
|
| 6619126 | A carbohydrate structural variant of MM glycoprotein (glycophorin A) | Adamany AM | 1983 Oct 10 |
|
PubAnnotation
