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Glycan Structure Repository
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Repository for lectin-assisted multimodality data
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G46748BU
Summary
- GlyTouCan ID
-
G46748BU
- IUPAC Condensed
- Neu5Ac(a2-3)Gal(b1-3)[Gal(b1-4)GlcNAc(b1-6)]GalNAc(a1-
- Motifs
- N-acetyllactosamine O-Glycan core 2 Sialyl T antigen Type 2 LN
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1039.37
Organisms
| Organisms | Evidence |
|---|---|
| Mus musculus (house mouse) | |
| Danio rerio (zebrafish) | |
| Rattus norvegicus (Norway rat) | |
| Homo sapiens (human) |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
G85608AG
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P01215 | Glycoprotein hormones alpha chain | ||
| P01563 | Interferon alpha-2 | ||
| P01876 | Immunoglobulin heavy constant alpha 1 | ||
| P02668 | Kappa-casein | ||
| P07359 | Platelet glycoprotein Ib alpha chain | ||
| P08751 | Lutropin/choriogonadotropin subunit beta | ||
| P0DN86 | Choriogonadotropin subunit beta 3 | ||
| P14780 | Matrix metalloproteinase-9 | ||
| P16150 | Leukosialin | ||
| P21754 | Zona pellucida sperm-binding protein 3 |
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- brain
- heart
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:b-dglc-HEX-1:5 7s:n-acetyl 8b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:1o(6+1)6d 6:6d(2+1)7n 7:6o(4+1)8d
- WURCS
- WURCS=2.0/4,5,4/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2-3-4-2/a3-b1_a6-d1_b3-c2_d4-e1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 34191522 | The O-Glycome of Human Nigrostriatal Tissue and Its Alteration in Parkinson's Disease | Wilkinson H | 2021 Aug 6 |
|
| 32236654 | Colorectal cancer cell lines show striking diversity of their O-glycome reflecting the cellular differentiation phenotype | Madunic K | 2020 Mar 31 |
|
| 30405127 | Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns | Yamakawa N | 2018 Nov 07 |
|
| 14673092 | Murine and human zona pellucida 3 derived from mouse eggs express identical O-glycans | Dell A | 2003 Dec 12 |
|
| 12000758 | Recombinant MUC1 probe authentically reflects cell-specific O-glycosylation profiles of endogenous breast cancer mucin. High density and prevalent core 2-based glycosylation | Muller S | 2002 Jul 19 |
|
| 11123894 | O-Glycan Analysis of Natural Human Neutrophil Gelatinase B Using a Combination of Normal Phase- HPLC and Online Tandem Mass Spectrometry: Implications for the Domain Organization of the Enzyme | Mattu TS | 2000 Dec 01 |
|
| 9538010 | Human Low-Molecular-Weight Salivary Mucin Expresses the Sialyl Lewisx Determinant and Has L-Selectin Ligand Activity | Prakobphol A | 1998 Apr 7 |
|
| 9654101 | Structural characterisation of N-linked and O-linked oligosaccharides derived from interferon-alpha2b and interferon-alpha14c produced by Sendai-virus-induced human peripheral blood leukocytes | Nyman TA | 1998 Apr 15 |
|
| 8034632 | Sialylation and sulfation of the carbohydrate chains in respiratory mucins from a patient with cystic fibrosis | Lo-Guidice JM | 1994 Jul 22 |
|
| 8054719 | Structures of monosialyl oligosaccharides isolated from the respiratory mucins of a non-secretor (O, Lea+b-) patient suffering from chronic bronchitis. Characterization of a novel type of mucin carbohydrate core structure | van Halbeek H | 1994 Apr |
|
