GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 301 - 325 of 499 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▼
VEGFA-VEGFR2 Pathway
  • C05D9.3
  • C49C3.10
  • CELE_F08H9.3
  • CELE_F08H9.4
  • CELE_F11E6.8
  • CELE_F12F6.1
  • CELE_F13B12.6
  • CELE_F21F3.2
  • CELE_F59F5.3
  • CELE_Y106G6D.4
  • CELE_Y106G6E.1
  • CELE_Y51B9A.9
  • CELE_ZK1128.7
  • aap-1
  • age-1
  • cdc-42
  • ced-10
  • ddr-2
  • gap-3
  • gska-3
  • gskl-2
  • hsp-12.1
  • hsp-12.2
  • hsp-12.3
  • hsp-12.6
  • hsp-16
  • hsp-16.1
  • hsp-16.11
  • hsp-16.2
  • hsp-16.41
  • hsp-16.48
  • hsp-16.49
  • hsp-17
  • hsp-43
  • hsp12-2
  • hsp16-1a
  • hsp16-1b
  • hsp16-2
  • hsp16-41
  • hsp16-48
  • hsp16-48a
  • hsp16-48b
  • hsp16-49
  • kin-1
  • kin-32
  • kin-36
  • let-502
  • mak-1
  • mak-2
  • max-2
  • nck-1
  • pak-1
  • pat-2
  • pat-3
  • pmk-1
  • pmk-2
  • pmk-3
  • rac-1
  • rho-1
  • rhoa
  • sip-1
  • src-1
  • svh-2
  • svh-4
  • vav-1
Caenorhabditis elegans
TWIK related potassium channel (TREK)
  • B0310.1
  • twk-1
  • twk-11
  • twk-18
  • twk-21
  • twk-22
  • twk-24
  • twk-25
  • twk-26
  • twk-31
  • twk-33
  • twk-34
  • twk-35
  • twk-36
  • twk-42
  • twk-44
  • twk-45
  • twk-49
  • twk-8
Caenorhabditis elegans
G-protein activation
  • C06G4.5
  • eat-11
  • egl-30
  • gbp-2
  • gpb-1
  • gpb-2
  • gpc-1
  • gpc-2
  • npr-16
  • npr-18
  • npr-23
  • npr-24
  • npr-26
  • npr-28
Caenorhabditis elegans
Formation of RNA Pol II elongation complex
  • 3L686
  • CELE_F02E9.10
  • F13B12.1
  • T24H10.1
  • ama-1
  • ccnk-1
  • cdc-73
  • cdk-7
  • cdk-9
  • cit-1.1
  • cit-1.2
  • ctr-9
  • eaf-1
  • elb-1
  • elc-1
  • ell-1
  • emb-5
  • fcp-1
  • gtf-2F1
  • gtf-2F2
  • gtf-2H1
  • gtf-2H2C
  • gtf-2H3
  • gtf-2H4
  • gtf-2H5
  • gtf-2f1
  • gtf-2f2
  • gtf-2h1
  • gtf-2h3
  • hmg-4
  • leo-1
  • mnat-1
  • pafo-1
  • rpb-1
  • rpb-10
  • rpb-11
  • rpb-12
  • rpb-2
  • rpb-3
  • rpb-4
  • rpb-5
  • rpb-6
  • rpb-7
  • rpb-8
  • rpb-9
  • spt-16
  • spt-4
  • spt-5
  • tceb-3
  • tpr-3
  • xpb-1
  • xpd-1
Caenorhabditis elegans
Organic anion transporters
  • C38C10.2
  • CELE_F52H2.4
  • K11H3.3
  • cima-1
  • eat-4
  • misc-1
  • slc-17.1
  • slc-17.3
  • slc-17.4
  • slc-17.5
  • slc-17.6
  • slc-17.7
  • slc-17.8
  • slc-17.9
  • slc-25A18.1
  • slc-25A18.2
  • slc-25a10
  • slc-25a18.1
  • slc-25a18.2
  • slc-5A12
  • vglu-2
  • vglu-3
Caenorhabditis elegans
Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
  • algn-1
  • algn-12
  • algn-13
  • algn-14
  • algn-2
  • algn-3
  • algn-6
  • algn-7
  • algn-8
  • algn-9
  • hpo-16
  • hpo-17
  • mpdu-1
Caenorhabditis elegans
Prostanoid ligand receptors
  • C06G4.5
  • npr-16
  • npr-18
  • npr-23
  • npr-24
  • npr-26
  • npr-28
Caenorhabditis elegans
HSP90 chaperone cycle for SHRs
  • CELE_F11F1.1
  • daf-21
  • dnj-12
  • dnj-19
  • hsp-1
  • hsp70a
  • sti-1
Caenorhabditis elegans
alpha-linolenic acid (ALA) metabolism
  • C17C3.1
  • acox-1.3
  • acox-3
  • des-5
  • elo-1
  • elo-2
  • elo-3
  • elo-4
  • elo-5
  • elo-6
  • elo-7
  • elo-8
  • elo-9
  • fat-3
  • fat-4
  • maoc-1
  • pmp-4
Caenorhabditis elegans
Retinoid metabolism and transport
  • C01G5.5
  • C07D8.6
  • C56G3.2
  • CELE_F49E10.2
  • CELE_F53F1.2
  • CELE_F53F1.3
  • CELE_K07C5.2
  • CELE_Y39G8B.1
  • CELE_Y39G8B.2
  • CELE_Y65B4BR.1
  • CELE_ZC443.1
  • R09H10.3
  • ZK697.8
  • bcmo-1
  • bcmo-2
  • exc-15
  • lbp-5
  • lbp-6
  • lbp-7
  • lbp-8
  • lpr-2
Caenorhabditis elegans
HS-GAG biosynthesis
  • C03H12.1
  • CELE_T19D12.6
  • gpn-1
  • hst-1
  • hst-2
  • hst-3.1
  • hst-3.2
  • hst-6
  • itx-1
  • lon-2
  • rig-5
  • sdn-1
  • sqv-7
  • ttn-1
Caenorhabditis elegans
VEGFR2 mediated cell proliferation
  • CELE_W04B5.5
  • aPKC
  • kin-11
  • pkc-2
  • pkc-3
  • sphk-1
  • tag-274
  • tpa-1
Caenorhabditis elegans
Synthesis of bile acids and bile salts
  • F35C8.5
  • obr-1
  • obr-2
  • obr-4
Caenorhabditis elegans
Downregulation of ERBB2 signaling
  • 1G758
  • CELE_F14B4.1
  • CELE_Y38H6C.20
  • cdc-37
  • chn-1
  • csk-1
  • cul-5
  • daf-21
  • kin-7
  • let-23
  • rme-2
  • rol-3
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
Glycerophospholipid catabolism
  • CELE_T03G6.3
  • CELE_T12B3.3
  • M110.7
  • ZK370.4
Caenorhabditis elegans
Transport of RCbl within the body
  • mrp-1
Caenorhabditis elegans
Calmodulin induced events
  • cal-5
  • grk-2
  • kin-11
  • pkc-2
  • tpa-1
Caenorhabditis elegans
Ubiquitin-dependent degradation of Cyclin D
  • C14C10.5
  • CELE_F35G12.12
  • cyd-1
  • pas-1
  • pas-2
  • pas-3
  • pas-4
  • pas-5
  • pas-6
  • pbs-1
  • pbs-2
  • pbs-3
  • pbs-4
  • pbs-5
  • pbs-7
  • psmd-9
  • psme-3
  • rpn-1
  • rpn-10
  • rpn-11
  • rpn-12
  • rpn-2
  • rpn-3
  • rpn-5
  • rpn-6.1
  • rpn-7
  • rpn-8
  • rpn-9
  • rpt-1
  • rpt-2
  • rpt-3
  • rpt-4
  • rpt-5
  • rpt-6
  • ubia
  • ubib
  • ubl-1
  • ubq-1
  • ubq-2
Caenorhabditis elegans
TGF-beta receptor signaling activates SMADs
  • C05D9.3
  • aka-1
  • cem-3
  • cet-1
  • daf-1
  • daf-4
  • daf-7
  • daf-8
  • dbl-1
  • fkb-2
  • fkb-8
  • kpc-1
  • nid-1
  • pat-2
  • pat-3
  • sli-1
  • sma-4
  • unc-129
Caenorhabditis elegans
ERBB2 Activates PTK6 Signaling
  • CELE_F14B4.1
  • CELE_Y47G6A.5
  • kin-7
  • let-23
  • nipi-4
  • rme-2
  • trk-1
Caenorhabditis elegans
Nephrin family interactions
  • gap-3
  • nck-1
  • pes-7
  • src-1
  • syg-1
  • syg-2
Caenorhabditis elegans
Ca2+ pathway
  • cal-5
  • cfz-2
  • cna-1
  • cnb-1
  • cwn-2
  • eat-11
  • gbp-2
  • goa-1
  • gpb-1
  • gpb-2
  • gpc-1
  • gpc-2
  • hmp-2
  • let-60
  • lin-17
  • lin-34
  • lin-44
  • lit-1
  • mom-2
  • mom-5
  • nlk
  • pop-1
  • tax-6
  • unc-43
  • wnt-2
Caenorhabditis elegans
Scavenging of heme from plasma
  • CELE_K03B8.6
  • zmp-1
  • zmp-2
  • zmp-3
  • zmp-5
  • zmp-6
Caenorhabditis elegans
Glyoxylate metabolism and glycine degradation
  • CELE_F41E6.5
  • CELE_T09B4.8
  • agxt-1
  • daao-1
  • ddo-1
  • ddo-2
  • ddo-3
  • got-2.2
  • prdh-1
  • prodh
Caenorhabditis elegans
Thyroxine biosynthesis
  • CELE_F52H2.4
  • bli-3
  • duox-2
  • pxn-1
  • pxn-2
  • slc-5A12
  • sup-18
Caenorhabditis elegans

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024