GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **451 - 475** of **2090** in total

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Pathway Name	Protein Name	UniProt ID ▼	Gene Symbol	Organism
GSD II	Glycogenin-1 Lysosomal alpha-glucosidase	P10253 P46976	GAA GYG GYG1	Homo sapiens (human)
Activation of BID and translocation to mitochondria	BH3-interacting domain death agonist Caspase-8 Glycylpeptide N-tetradecanoyltransferase 1 Granzyme B	P10144 P30419 P55957 Q14790	BID CASP8 CGL1 CSPB CTLA1 GRB GZMB MCH5 NMT NMT1	Homo sapiens (human)
Mitochondrial iron-sulfur cluster biogenesis	Adrenodoxin, mitochondrial Ferredoxin-2, mitochondrial Frataxin, mitochondrial Glutaredoxin-related protein 5, mitochondrial Iron-sulfur cluster assembly 1 homolog, mitochondrial Iron-sulfur cluster assembly 2 homolog, mitochondrial Iron-sulfur cluster co-chaperone protein HscB LYR motif-containing protein 4 Mitoferrin-1 Mitoferrin-2	P10109 Q16595 Q6P4F2 Q86SX6 Q86U28 Q8IWL3 Q96A46 Q9BUE6 Q9HD34 Q9NYZ2	ADX C14orf87 C6orf149 DNAJC20 FDX1 FDX1L FDX2 FRDA FXN GLRX5 HBLD1 HBLD2 HSC20 HSCB ISCA1 ISCA2 ISD11 LYRM4 MFRN MFRN2 MSCP SLC25A28 SLC25A37 X25	Homo sapiens (human)
Electron transport from NADPH to Ferredoxin	Adrenodoxin, mitochondrial Ferredoxin-2, mitochondrial NADPH	P10109 P22570 Q6P4F2	ADX ADXR FDX1 FDX1L FDX2 FDXR	Homo sapiens (human)
RUNX2 regulates chondrocyte maturation	Core-binding factor subunit beta Histone deacetylase 4 Indian hedgehog protein Zinc finger protein GLI2	P10070 P56524 Q13951 Q14623	CBFB GLI2 HDAC4 IHH KIAA0288 THP	Homo sapiens (human)
Maturation of nucleoprotein	Casein kinase I isoform alpha Glycogen synthase kinase-3 alpha Glycogen synthase kinase-3 beta Nucleoprotein Protein arginine N-methyltransferase 1 Protein mono-ADP-ribosyltransferase PARP10 Protein mono-ADP-ribosyltransferase PARP14 Protein mono-ADP-ribosyltransferase PARP16 Protein mono-ADP-ribosyltransferase PARP4 Protein mono-ADP-ribosyltransferase PARP6 Protein mono-ADP-ribosyltransferase PARP8 Protein mono-ADP-ribosyltransferase PARP9 SRSF protein kinase 1 SRSF protein kinase 2 SUMO-conjugating enzyme UBC9 Small ubiquitin-related modifier 1	P0DTC9 P48729 P49840 P49841 P63165 P63279 P78362 Q2NL67 Q460N5 Q53GL7 Q8IXQ6 Q8N3A8 Q8N5Y8 Q96SB4 Q99873 Q9UKK3	ADPRTL1 ARTD15 BAL BAL1 BAL2 C15orf30 CSNK1A1 GSK3A GSK3B HMT2 HRMT1L2 IR1B4 KIAA0177 KIAA1268 N PARP10 PARP14 PARP16 PARP4 PARP6 PARP8 PARP9 PARPL PRMT1 SMT3C SMT3H3 SRPK1 SRPK2 SUMO1 UBC9 UBCE9 UBE2I UBL1	Homo sapiens (human)
Interleukin-17 signaling	Interleukin-17 receptor A Interleukin-17 receptor B Interleukin-17 receptor C Interleukin-17 receptor E Interleukin-17A Interleukin-17C Interleukin-17F Interleukin-25 ORF8 protein	P0DTC8 Q16552 Q8NAC3 Q8NFR9 Q96F46 Q96PD4 Q9H293 Q9NRM6 Q9P0M4	8 CRL4 CTLA8 EVI27 IL17 IL17A IL17BR IL17C IL17E IL17F IL17R IL17RA IL17RB IL17RC IL17RE IL25	Homo sapiens (human)
Translation of Accessory Proteins	ORF6 protein ORF7a protein ORF8 protein ORF9b protein	P0DTC6 P0DTC7 P0DTC8 P0DTD2	6 7a 8 9b	Homo sapiens (human)
Maturation of protein M	Membrane protein	P0DTC5	M	Homo sapiens (human)
Regulation of gap junction activity	Envelope small membrane protein Gap junction alpha-1 protein Tight junction protein ZO-1	P0DTC4 P17302 Q07157	E GJA1 GJAL TJP1 ZO1	Homo sapiens (human)
SARS-CoV-2 targets PDZ proteins in cell-cell junction	Envelope small membrane protein Gap junction alpha-1 protein InaD-like protein Protein PALS1 Protein crumbs homolog 3 Tight junction protein ZO-1	P0DTC4 P17302 Q07157 Q8N3R9 Q8NI35 Q9BUF7	CIPP CRB3 E GJA1 GJAL INADL MPP5 PALS1 PATJ TJP1 ZO1	Homo sapiens (human)
Maturation of protein 3a	Alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 Beta-galactoside alpha-2,6-sialyltransferase 1 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 ORF3a protein Polypeptide N-acetylgalactosaminyltransferase 1	P0DTC3 P15907 Q10472 Q11201 Q11203 Q11206 Q16842 Q8NDV1 Q9H4F1 Q9UJ37	3a CGS23 GALNT1 NANTA3 SIAT1 SIAT3C SIAT4 SIAT4A SIAT4B SIAT4C SIAT6 SIAT7B SIAT7C SIAT7D SIATL1 ST3GAL1 ST3GAL2 ST3GAL3 ST3GAL4 ST6GAL1 ST6GALNAC2 ST6GALNAC3 ST6GALNAC4 STHM STZ	Homo sapiens (human)
SARS-CoV-2 modulates autophagy	Elongation factor Tu, mitochondrial Membrane protein Microtubule-associated proteins 1A/1B light chain 3B ORF3a protein ORF7a protein UV radiation resistance-associated gene protein Vacuolar protein sorting-associated protein 11 homolog Vacuolar protein sorting-associated protein 16 homolog Vacuolar protein sorting-associated protein 18 homolog Vacuolar protein sorting-associated protein 33A Vacuolar protein sorting-associated protein 33B Vacuolar protein sorting-associated protein 41 homolog Vacuolar protein sorting-associated protein 45 Vam6/Vps39-like protein	P0DTC3 P0DTC5 P0DTC7 P49411 P49754 Q96AX1 Q96JC1 Q9GZQ8 Q9H267 Q9H269 Q9H270 Q9NRW7 Q9P253 Q9P2Y5	3a 7a KIAA0770 KIAA1475 M MAP1ALC3 MAP1LC3B RNF108 TLP TUFM UVRAG VAM6 VPS11 VPS16 VPS18 VPS33A VPS33B VPS39 VPS41 VPS45 VPS45A VPS45B	Homo sapiens (human)
Translation of Structural Proteins	Envelope small membrane protein Membrane protein Nucleoprotein ORF3a protein Spike glycoprotein	P0DTC2 P0DTC3 P0DTC4 P0DTC5 P0DTC9	3a E M N S	Homo sapiens (human)
Virion Assembly and Release	Envelope small membrane protein Membrane protein Nucleoprotein ORF3a protein ORF7a protein Spike glycoprotein	P0DTC2 P0DTC3 P0DTC4 P0DTC5 P0DTC7 P0DTC9	3a 7a E M N S	Homo sapiens (human)
Maturation of replicase proteins	Iron-sulfur cluster assembly enzyme ISCU Replicase polyprotein 1a Replicase polyprotein 1ab	P0DTC1 P0DTD1 Q9H1K1	ISCU NIFUN rep	Homo sapiens (human)
Toxicity of botulinum toxin type A (botA)	Botulinum neurotoxin type A HA-17 HA-33 protein Ha70 protein NTNHA Synaptic vesicle glycoprotein 2A Synaptic vesicle glycoprotein 2B Synaptic vesicle glycoprotein 2C Synaptosomal-associated protein 25	P0DPI0 P60880 Q45877 Q45878 Q496J9 Q57230 Q7L0J3 Q7L1I2 Q9LBS8	HA HA-17 HA-33 KIAA0735 KIAA0736 KIAA1054 SNAP SNAP25 SV2A SV2B SV2C atx bonT botA ha17 ha34 ha70 ntnha	Homo sapiens (human)
CaM pathway	Calmodulin-1	P0DP23	CALM CALM1 CAM CAM1	Homo sapiens (human)
Activation of RAC1 downstream of NMDARs	ARF GTPase-activating protein GIT1 Calcium/calmodulin-dependent protein kinase kinase 1 Calcium/calmodulin-dependent protein kinase kinase 2 Calcium/calmodulin-dependent protein kinase type 1 Calmodulin-1 Ras-related C3 botulinum toxin substrate 1	P0DP23 P63000 Q14012 Q8N5S9 Q96RR4 Q9Y2X7	CALM CALM1 CAM CAM1 CAMK1 CAMKK1 CAMKK2 CAMKKA CAMKKB GIT1 KIAA0787 RAC1 TC25	Homo sapiens (human)
Cam-PDE 1 activation	Calmodulin-1 Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C	P0DP23 P54750 Q01064 Q14123	CALM CALM1 CAM CAM1 PDE1A PDE1B PDE1C PDES1B	Homo sapiens (human)
CREB1 phosphorylation through the activation of CaMKII/CaMKK/CaMKIV cascasde	Calcium/calmodulin-dependent protein kinase kinase 1 Calcium/calmodulin-dependent protein kinase kinase 2 Calcium/calmodulin-dependent protein kinase type II subunit beta Calcium/calmodulin-dependent protein kinase type II subunit gamma Calcium/calmodulin-dependent protein kinase type IV Calmodulin-1 Importin subunit alpha-1	P0DP23 P52292 Q13554 Q13555 Q16566 Q8N5S9 Q96RR4	CALM CALM1 CAM CAM1 CAM2 CAMK CAMK-GR CAMK-II CAMK2 CAMK2B CAMK2G CAMK4 CAMKB CAMKG CAMKIV CAMKK1 CAMKK2 CAMKKA CAMKKB KIAA0787 KPNA2 RCH1 SRP1	Homo sapiens (human)
CaMK IV-mediated phosphorylation of CREB	Calcium/calmodulin-dependent protein kinase kinase 1 Calcium/calmodulin-dependent protein kinase kinase 2 Calcium/calmodulin-dependent protein kinase type II subunit alpha Calcium/calmodulin-dependent protein kinase type II subunit beta Calcium/calmodulin-dependent protein kinase type II subunit delta Calcium/calmodulin-dependent protein kinase type II subunit gamma Calcium/calmodulin-dependent protein kinase type IV Calmodulin-1 Importin subunit alpha-1	P0DP23 P52292 Q13554 Q13555 Q13557 Q16566 Q8N5S9 Q96RR4 Q9UQM7	CALM CALM1 CAM CAM1 CAM2 CAMK CAMK-GR CAMK-II CAMK2 CAMK2A CAMK2B CAMK2D CAMK2G CAMK4 CAMKA CAMKB CAMKD CAMKG CAMKIV CAMKK1 CAMKK2 CAMKKA CAMKKB KIAA0787 KIAA0968 KPNA2 RCH1 SRP1	Homo sapiens (human)
Activation of Ca-permeable Kainate Receptor	Calmodulin-1 Disks large homolog 1 Disks large homolog 3 Disks large homolog 4 Glutamate receptor ionotropic, kainate 1 Glutamate receptor ionotropic, kainate 2 Glutamate receptor ionotropic, kainate 3 Glutamate receptor ionotropic, kainate 4 Glutamate receptor ionotropic, kainate 5 Neurocalcin-delta	P0DP23 P39086 P61601 P78352 Q12959 Q13002 Q13003 Q16099 Q16478 Q92796	CALM CALM1 CAM CAM1 DLG1 DLG3 DLG4 GLUR5 GLUR6 GLUR7 GRIK GRIK1 GRIK2 GRIK3 GRIK4 GRIK5 KIAA1232 NCALD PSD95	Homo sapiens (human)
Loss of phosphorylation of MECP2 at T308	Calcium/calmodulin-dependent protein kinase type IV Calmodulin-1 cAMP-dependent protein kinase catalytic subunit alpha	P0DP23 P17612 Q16566	CALM CALM1 CAM CAM1 CAMK CAMK-GR CAMK4 CAMKIV PKACA PRKACA	Homo sapiens (human)
CREB1 phosphorylation through the activation of Adenylate Cyclase	Adenylate cyclase type 1 Adenylate cyclase type 8 Calmodulin-1 cAMP-dependent protein kinase catalytic subunit PRKX cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cAMP-dependent protein kinase catalytic subunit gamma cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type I-beta regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase type II-beta regulatory subunit	P0DP23 P10644 P13861 P17612 P22612 P22694 P31321 P31323 P40145 P51817 Q08828	ADCY1 ADCY8 CALM CALM1 CAM CAM1 PKACA PKR1 PKR2 PKX1 PRKACA PRKACB PRKACG PRKAR1 PRKAR1A PRKAR1B PRKAR2 PRKAR2A PRKAR2B PRKX TSE1	Homo sapiens (human)

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