GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **301 - 325** of **1070** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Receptor-type tyrosine-protein phosphatases	Interleukin 1 receptor accessory protein-like 2 Interleukin-1 receptor accessory protein-like 1 Interleukin-1 receptor accessory protein Leucine-rich repeat-containing protein 4B Liprin-alpha-3 Liprin-alpha-4 (Fragment) NT-3 growth factor receptor PPFIA binding protein 1 PPFIA binding protein 2 PTPRF interacting protein alpha 1 PTPRF interacting protein alpha 2 Receptor-type tyrosine-protein phosphatase F Receptor-type tyrosine-protein phosphatase S SLIT and NTRK-like family, member 1 SLIT and NTRK-like family, member 2 SLIT and NTRK-like family, member 3 SLIT and NTRK-like family, member 4 SLIT and NTRK-like family, member 5 SLIT and NTRK-like family, member 6 protein-tyrosine-phosphatase	A0A1B0GWS0 A0A1W2Q6G2 A0A8I5ZVX1 A0A8I6A6R5 A0A8I6AET5 A0A8I6AK94 A0A8I6ANB2 D3Z8D8 D3ZK41 D3ZP44 D4A062 M0R9U3 P0CC10 P59824 Q03351 Q63621 Q64604 Q64605 Q91Z79 Q91Z80	Il1rap Il1rapl1 Il1rapl2 Lar Lrig4 Lrrc4b Ntrk3 Ppfia1 Ppfia2 Ppfia3 Ppfia4 Ppfibp1 Ppfibp2 Ptprd Ptprf Ptprs Slitrk1 Slitrk2 Slitrk3 Slitrk4 Slitrk5 Slitrk6 Trkc	Rattus norvegicus (Norway rat)
Receptor Mediated Mitophagy	Autophagy protein 5 Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta FUN14 domain-containing protein 1 Microtubule-associated proteins 1A/1B light chain 3A Microtubule-associated proteins 1A/1B light chain 3B Proto-oncogene tyrosine-protein kinase Src Serine/threonine-protein kinase Serine/threonine-protein phosphatase PGAM5, mitochondrial Ubiquitin-like protein ATG12	D3ZMG0 F7FH41 P19139 P67874 Q2TBJ5 Q3MQ06 Q562B5 Q5BJS4 Q62625 Q6XVN8 Q9WUD9	Apg12l Atg12 Atg5 Ck2n Csnk2a1 Csnk2a2 Csnk2b Fundc1 Map1alc3 Map1lc3 Map1lc3a Map1lc3b Pgam5 Src Ulk1	Rattus norvegicus (Norway rat)
Reactions specific to the hybrid N-glycan synthesis pathway	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase	Q02527	Gnt3 Mgat3	Rattus norvegicus (Norway rat)
Reactions specific to the complex N-glycan synthesis pathway	Alpha-(1,6)-fucosyltransferase Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Alpha-mannosidase 2 Alpha-mannosidase Carbohydrate sulfotransferase 10 Tissue alpha-L-fucosidase	A0A0G2JWG1 O54702 P17164 P28494 Q09326 Q6EV76	Chst10 Fuca Fuca1 Fut8 Gnt2 Man2a1 Man2a2 Mana2 Mgat2	Rattus norvegicus (Norway rat)	G70323CJ G82576YO
Rap1 signalling	14-3-3 protein beta/alpha 14-3-3 protein zeta/delta RAF proto-oncogene serine/threonine-protein kinase RAP1 GTPase activating protein 2 RAS guanyl-releasing protein 1 RAS guanyl-releasing protein 2 Rap guanine nucleotide exchange factor 3 Rap guanine nucleotide exchange factor 4 (Fragment) Rap1 GTPase-activating protein Ras-related protein Rap-1A Ras-related protein Rap-1b Signal-induced proliferation-associated 1 cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cGMP-dependent protein kinase	A0A8I6A9E8 A0A8I6AQM4 E9PSX8 F1LV89 P0C643 P11345 P27791 P35213 P62836 P63102 P68182 Q62636 Q9R1K8 Q9Z1C7 Q9Z1C8	AABR07006724.1 Cgef2 Epac Epac1 Epac2 Krev1 Msfs1 Pkacb Prkaca Prkacb Prkg1 Raf Raf1 Rap1a Rap1b Rap1gap Rap1gap2 Rapgef3 Rapgef4 Rasgrp Rasgrp1 Rasgrp2 Sipa1 Ywhab Ywhaz	Rattus norvegicus (Norway rat)
RUNX3 regulates p14-ARF	Core-binding factor subunit beta G1/S-specific cyclin-D1 Histone deacetylase 4 Runt-related transcription factor Transforming growth factor beta-1 proprotein histone acetyltransferase	A0A0G2K7T0 A0A8I6G641 A0A8I6GMB2 P17246 P39948 Q99P99	Cbfb Ccnd1 Ep300 Hdac4 Runx3 Tgfb1	Rattus norvegicus (Norway rat)
RUNX3 regulates YAP1-mediated transcription	Runt-related transcription factor TEA domain transcription factor 1 TEA domain transcription factor 2 Transcriptional coactivator YAP1 Transcriptional enhancer factor TEF-3 Transcriptional enhancer factor TEF-5	A0A0G2K2S9 A0A0G2K7T0 A0A8I5ZMT2 A0A8I6AIX9 A0A8I6GMF8 Q2EJA0	Runx3 Tead1 Tead2 Tead3 Tead4 Yap Yap1 Yap65	Rattus norvegicus (Norway rat)
RUNX3 regulates WNT signaling	Catenin beta-1 Lymphoid enhancer-binding factor 1 Runt-related transcription factor Transcription factor 7 like 1 Transcription factor 7 like 2 Transcription factor 7	A0A0G2K7T0 A0A8I5ZLY3 A0A8I5ZT78 A0A8I6A9A2 Q9QXN1 Q9WU82	Catnb Ctnnb1 Lef1 Runx3 Tcf7 Tcf7l1 Tcf7l2	Rattus norvegicus (Norway rat)
RUNX3 regulates NOTCH signaling	Histone acetyltransferase Histone acetyltransferase Histone lysine acetyltransferase CREBBP Mastermind-like transcriptional coactivator 1 Mastermind-like transcriptional coactivator 2 Mastermind-like transcriptional coactivator 3 Recombination signal binding protein for immunoglobulin kappa J region Runt-related transcription factor SNW domain-containing protein 1 histone acetyltransferase	A0A0G2K7T0 A0A8I5Y222 A0A8I5ZP60 A0A8I5ZUF4 A0A8I6ABZ3 A0A8I6G641 D4A930 D4ACX5 F1M3B2 Q6JHU9	Cbp Crebbp Ep300 Kat2a Kat2b Maml1 Maml2 Maml3 Rbpj Runx3 Snw1	Rattus norvegicus (Norway rat)
RUNX3 regulates CDKN1A transcription	Cellular tumor antigen p53 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Runt-related transcription factor Transforming growth factor beta-1 proprotein Zinc finger homeobox 3	A0A0G2K7T0 F1M4Q6 O70437 P10361 P17246 P84025	Madh3 Madh4 P53 Runx3 Smad3 Smad4 Tgfb1 Tp53 Zfhx3	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in interleukin signaling	Core-binding factor subunit beta E74 like ETS transcription factor 1 Runt-related transcription factor 1	A0A8I6GMB2 G3V9V2 Q63046	Aml1 Cbfa2 Cbfb Elf1 Runx1	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of myeloid cells	Core-binding factor subunit beta Histone lysine acetyltransferase CREBBP Runt-related transcription factor 1	A0A8I6GMB2 Q63046 Q6JHU9	Aml1 Cbfa2 Cbfb Cbp Crebbp Runx1	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes	Cathepsin K Procathepsin L Serpin family B member 13 Similar to Cathepsin L precursor (Major excreted protein) (MEP)	D3ZKA0 D3ZKC3 O35186 P07154	Cts7l2 Ctsk Ctsl Ctsl1 Ctsll3 RGD1308751 Serpinb13	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of HSCs	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 CDK-activating kinase assembly factor MAT1 Core-binding factor subunit beta Cyclin-H Cyclin-dependent kinase 7 (Fragment) E3 ubiquitin-protein ligase Endothelial transcription factor GATA-2 Erythroid transcription factor Histone-lysine N-methyltransferase LIM domain binding 1 LIM domain only protein 3 Polyubiquitin-B Polyubiquitin-C Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14 Proteasome 26S subunit, ATPase 6 Proteasome 26S subunit, non-ATPase 3 Proteasome 26S subunit, non-ATPase 7 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type Proteasome subunit beta type-10 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 Proteasome subunit beta Rhombotin-2 Runt-related transcription factor 1 TAL bHLH transcription factor 1, erythroid differentiation factor Transcription factor 12 Transcription factor E2-alpha Transcriptional coactivator YAP1 Tumor protein p73 Tyrosine-protein kinase Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JSL0 A0A0G2K1M1 A0A0G2K3R4 A0A0G2KAX0 A0A8I5ZM79 A0A8I5ZNE7 A0A8I5ZZU1 A0A8I6A5Y3 A0A8I6G409 A0A8I6GMB2 B0BN93 D4AA88 E9PT20 F1LMQ3 F1LMZ8 F1M0L3 F1M6I7 F7EX11 F7FGV7 G3V6W6 G3V8G2 O88761 P0CG51 P17220 P18420 P18421 P18422 P21670 P21677 P28064 P28073 P28075 P28077 P34064 P34067 P40112 P40307 P43429 P48004 P51514 P51952 P60901 P62193 P62198 P62982 Q2EJA0 Q4FZT9 Q4KM35 Q4V8E2 Q5XIC6 Q5XIU5 Q63046 Q63347 Q63429 Q63569 Q63570 Q63797 Q63798 Q924Y4 Q99MB5 Q9JHW0 Q9R1A0 Q9WTV5 Q9Z2X3	Abl1 Aml1 Cak Cak1 Cbfa2 Cbfb Ccnh Cdk7 Gata1 Gata2 Itch Kmt2a LOC100360645 LOC100360846 LOC100365869 Ldb1 Lmo2 Lmo3 Lmp10 Lmp2 Mecl1 Mll Mll1 Mnat1 Mo15 Mss1 Pan Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma8 Psmb1 Psmb10 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb6l Psmb6l1 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme4 Psmf1 Ptf1c Ring12 Rps27a Runx1 Sug1 Tal1 Tbp1 Tbp7 Tcf12 Tcf3 Tcfe2a Tp73 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Yap Yap1 Yap65	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in BCR signaling	Core-binding factor subunit beta Paired box 5 Runt-related transcription factor 1	A0A8I5ZL27 A0A8I6GMB2 Q63046	Aml1 Cbfa2 Cbfb Pax5 Runx1	Rattus norvegicus (Norway rat)
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function	ASH2 like histone lysine methyltransferase complex subunit Core-binding factor subunit beta Erythroid transcription factor Histone H2A type 2-A Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H3.1 Histone H3.3 Histone H3 Histone H4 Histone acetyltransferase Histone deacetylase 1 Histone-lysine N-methyltransferase Protein arginine N-methyltransferase 1 RB binding protein 5, histone lysine methyltransferase complex subunit Runt-related transcription factor 1 SET domain containing 1A, histone lysine methyltransferase SET domain containing 1B, histone lysine methyltransferase SIN3 transcription regulator family member A SIN3 transcription regulator family member B WD repeat-containing protein 5 Zinc finger protein, multitype 1 [histone H3]-lysine(4) N-methyltransferase [histone H3]-lysine(4) N-methyltransferase histone acetyltransferase	A0A0G2JXI9 A0A0G2K1E3 A0A0G2K6T6 A0A8I5Y222 A0A8I5ZSA8 A0A8I5ZYY0 A0A8I6A2W1 A0A8I6A4Z1 A0A8I6A7P3 A0A8I6AFW8 A0A8I6ANV4 A0A8I6AWT3 A0A8I6G641 A0A8I6G659 A0A8I6G8L9 A0A8I6GMB2 A9UMV8 D3ZBP2 D3ZC01 D3ZJ08 D3ZTV7 D3ZVK7 D3ZXP3 D4A168 D4ACM0 F1M0L3 G3V9C7 M0RBQ5 P0CC09 P43429 P62804 P84245 Q00729 Q498M4 Q4QQW4 Q63009 Q63046 Q6LED0	Aml1 Ash2l Cbfa2 Cbfb ENSRNOG00000062927 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 Ep300 Gata1 H2ab3 H2ac10 H2ac18 H2ac4 H2afb3 H2afx H2aj H2ax H2az2 H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H3-3b H3.3b H3c13 H3f3b H4c16 H4c2 H4f16 H4ft Hdac1 Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist2h2aa3 Hist2h3c2 Hist4 Hist4h4 Hrmt1l2 Kat2b Kmt2a Kmt2b Kmt2c LOC100365043 LOC100910200 LOC120097726 LOC684797 Mll Mll1 Prmt1 Rbbp5 Runx1 Setd1a Setd1b Sin3a Sin3b Th2b Wdr5 Zfpm1	Rattus norvegicus (Norway rat)
RUNX1 regulates estrogen receptor mediated transcription	Core-binding factor subunit beta Estrogen receptor Runt-related transcription factor 1	A0A8I6GMB2 P06211 Q63046	Aml1 Cbfa2 Cbfb Esr Esr1 Estr Nr3a1 Runx1	Rattus norvegicus (Norway rat)
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known	AT-rich interaction domain 1A AT-rich interaction domain 1B Actin-like 6A Actin-like protein 6B Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta Chromobox 2 Chromobox 4 Chromobox 6 Chromobox 8 Core-binding factor subunit beta E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING2 Polybromo 1 Polycomb group ring finger 5 Polyhomeotic homolog 1 Polyhomeotic homolog 2 Polyhomeotic homolog 3 RING1 and YY1 binding protein Runt-related transcription factor 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 Scm polycomb group protein like 2 Transcription activator BRG1 YY1 associated factor 2 histone acetyltransferase	A0A0G2JVD3 A0A0G2K2B0 A0A8I5Y785 A0A8I5ZMG5 A0A8I5ZMW9 A0A8I5ZQQ2 A0A8I6A5E1 A0A8I6ACN6 A0A8I6AHM8 A0A8I6AJE2 A0A8I6AMA8 A0A8I6ASY1 A0A8I6G641 A0A8I6GMB2 A0A8J8YH81 D3ZBS9 D3ZII7 D3ZRL8 D4A0M3 E9PTG1 F1M771 F7FH41 M0RE14 O54772 P19139 P67874 P86173 Q4KLY4 Q4KM87 Q56A18 Q63046 Q6MGB6 Q8K1P7	Actl6a Actl6b Aml1 Arid1a Arid1b Baf190a Baf57 Baf60b Brg1 Cbfa2 Cbfb Cbx2 Cbx4 Cbx6 Cbx8 Ck2n Csnk2a1 Csnk2a2 Csnk2b Ep300 LOC120102351 Pbrm1 Pcgf5 Phc1 Phc2 Phc3 Ring1 Ring1b Rnf1 Rnf2 Runx1 Rybp Scml2 Smarca2 Smarca4 Smarcb1 Smarcc1 Smarcc2 Smarcd1 Smarcd2 Smarcd3 Smarce1 Snf2b Snf2l4 Yaf2	Rattus norvegicus (Norway rat)
RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs)	Core-binding factor subunit beta Forkhead box P3 Runt-related transcription factor 1	A0A8I6GMB2 D4Q8I2 Q63046	Aml1 Cbfa2 Cbfb Foxp3 Runx1	Rattus norvegicus (Norway rat)
ROS and RNS production in phagocytes	ATPase H+ transporting V0 subunit B ATPase H+ transporting V0 subunit D1 ATPase H+ transporting V1 subunit E2 Cytochrome b-245 heavy chain Cytochrome b-245 light chain H(+)-transporting two-sector ATPase Natural resistance-associated macrophage protein 1 Neutrophil cytosol factor 2 Neutrophil cytosolic factor 1 Neutrophil cytosolic factor 4 Nitric oxide synthase 1 Nitric oxide synthase 3 Nitric oxide synthase, inducible Rac family small GTPase 2 V-type proton ATPase 116 kDa subunit a 1 V-type proton ATPase 16 kDa proteolipid subunit c V-type proton ATPase subunit B, brain isoform V-type proton ATPase subunit C 1 V-type proton ATPase subunit C 2 V-type proton ATPase subunit D V-type proton ATPase subunit E 1 V-type proton ATPase subunit F V-type proton ATPase subunit G V-type proton ATPase subunit G V-type proton ATPase subunit G V-type proton ATPase subunit H V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit d 2 V-type proton ATPase subunit e 1 V-type proton ATPase subunit e 2 Vacuolar proton pump subunit B Voltage-gated hydrogen channel 1	A0A8I5ZND3 A0A8I5ZNF3 A0A8I5ZWI2 A0A8I6A1P8 A0A8I6B3N3 A0A8J8XD13 A7E3N2 D3ZIU8 D3ZJ78 D3ZTZ4 D3ZZS8 D4A133 D4A1H0 F1M707 F7FFW7 P25286 P29476 P50408 P62815 P63081 P70553 Q06518 Q5EB76 Q5FVI6 Q5FVL0 Q62600 Q62737 Q6AYE4 Q6P503 Q6PCU2 Q794C0 Q8R2H0 Q9ERL1	Aif1 Atp6b2 Atp6c Atp6l Atp6n1 Atp6s14 Atp6v0a1 Atp6v0a4 Atp6v0b Atp6v0c Atp6v0d1 Atp6v0d2 Atp6v0e Atp6v0e1 Atp6v0e2 Atp6v1a Atp6v1b1 Atp6v1b2 Atp6v1c1 Atp6v1c2 Atp6v1d Atp6v1e1 Atp6v1e2 Atp6v1f Atp6v1g1 Atp6v1g2 Atp6v1g3 Atp6v1h Atpl Bat1a Bcg Bnos Cdk2ap1-ps2 Cdk2ap1-ps3 Cdk2ap1-ps4 Cdk2ap1-ps5 Cdk2ap1-ps6 Cyba Cybb Dsr1 E230034O05Rik Hvcn1 LOC224733l-3 LOC224733l-4 LOC224733l-5 LOC224733l-6 LOC224733l-7 LOC224733l-8 Lst1 Ncf1 Ncf2 Ncf4 Nos1 Nos2 Nos3 Nramp1 RT1-CE12 RT1-CE3 RT1-CE5 RT1-CE6 RT1-CE8 RT1-CE9 Rac2 Sacm2l-ps3 Sacm2l-ps4 Sacm2l-ps5 Sacm2l-ps6 Sacm2l-ps7 Slc11a1 Tcirg1 Tnf Vat2 Vatf Vpp1	Rattus norvegicus (Norway rat)
RND3 GTPase cycle	Ankyrin repeat domain containing 26 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 Carboxypeptidase D Caveolin-1 Coiled coil domain containing 88A Creatine kinase B-type Cytoskeleton-associated protein 4 DEP domain containing 1B Desmoglein 1 Desmoplakin Discs large MAGUK scaffold protein 5 Dystonin Family with sequence similarity 83, member B Flotillin-2 Kinectin 1 Mucin-13 Nischarin Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol-binding clathrin assembly protein Plakophilin 4 Pleckstrin homology domain-containing family G member 5 RAS protein activator like 2 RNA binding motif protein 39 RNA-binding motif protein, X chromosome Rho GTPase activating protein 21 Rho GTPase activating protein 5 Rho GTPase-activating protein 35 Rho-associated protein kinase 1 Rho-related GTP-binding protein RhoE Scribble planar cell polarity protein Semaphorin-4F Thioredoxin-like protein 1 Tropomodulin 3 Tyrosine-protein phosphatase non-receptor type 13 UBX domain-containing protein 11 Vang-like protein 2 Vang-like protein receptor protein-tyrosine kinase tRNA (34-2'-O)-methyltransferase regulator WDR6	A0A0G2K7N9 A0A8I5ZQD4 A0A8I6A4W2 A0A8I6A5W7 A0A8I6A880 A0A8I6AI87 A0A8I6GDA1 A0A8I6GLX4 A0A8J8XIU8 D3ZBN3 D3ZF70 D3ZH41 D3ZKC8 D3ZM39 D3ZWS0 D4AA32 F1LMV6 F7F0R0 G3V9S3 M0R3T8 O55012 P07335 P41350 P81128 P84889 P97881 Q4G017 Q4V898 Q5XFW6 Q63644 Q63787 Q63788 Q6RFZ7 Q6SA80 Q7TNY1 Q8R512 Q920J4 Q9JHW1 Q9Z143 Q9Z2S9	Ankrd26 Arhe Arhgap21 Arhgap35 Arhgap5 Calm Cav Cav1 Ccdc88a Ckap4 Ckb Ckbb Cpd Depdc1b Dlg5 Dsg1 Dsp Dst Epha2 Fam83b Flot2 Grlf1 Ktn1 Muc13 Nisch P190A Picalm Pik3r1 Pik3r2 Pkp4 Plekhg5 Ptpn13 Rasal2 Rbm39 Rbmx Rbmxrt Reg1 Rhoe Rnd3 Rock1 Scrib Sema4f Soc Tech Tmod3 Tnfaip1 Trp Txnl1 Ubxd5 Ubxn11 Vangl1 Vangl2 Wdr6 p190ARHOGAP	Rattus norvegicus (Norway rat)
RND2 GTPase cycle	Aldehyde dehydrogenase family 3 member A2 Ankyrin repeat domain containing 26 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 Bridge-like lipid transfer protein family member 3B Caveolin-1 Cytoskeleton-associated protein 4 DEP domain containing 1B Desmoglein 1 Discs large MAGUK scaffold protein 5 Dystonin Family with sequence similarity 83, member B Fibroblast growth factor receptor substrate 2 Fibroblast growth factor receptor substrate 3 Formin-binding protein 1 Golgin A3 Inactive tyrosine-protein kinase PRAG1 Kinase D-interacting substrate of 220 kDa Kinectin 1 Kinesin family member 14 Mucin-13 Nischarin Nuclear migration protein nudC Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Plakophilin 4 Plexin D1 RNA binding motif protein 39 RNA-binding motif protein, X chromosome Rho GTPase activating protein 1 Rho GTPase activating protein 5 Rho GTPase-activating protein 35 Rho family GTPase 2 Scribble planar cell polarity protein Thioredoxin-like protein 1 Transferrin receptor protein 1 Tyrosine-protein phosphatase non-receptor type 13 UBX domain-containing protein 11 Vang-like protein 2 Vang-like protein receptor protein-tyrosine kinase tRNA (34-2'-O)-methyltransferase regulator WDR6	A0A0G2JYR5 A0A0G2K7N9 A0A8I5ZQD4 A0A8I6A4W2 A0A8I6A880 A0A8I6GLX4 A0A8J8XIU8 D3ZBN3 D3ZE01 D3ZF70 D3ZH41 D3ZKC8 D3ZLD5 D3ZM39 D3ZMK9 D3ZWS0 D4A244 D4AA32 D4AA77 G3V9S3 M0R3T8 M0R8V0 P30839 P41350 P81128 P84889 P97881 Q4G017 Q4V898 Q52RG8 Q5HZE6 Q5XFW6 Q63525 Q63787 Q63788 Q7TNY1 Q8R511 Q8R512 Q920J4 Q99376 Q9EQG6	Aldh3a2 Aldh4 Ankrd26 Arhgap1 Arhgap35 Arhgap5 Arms Bltp3b Cav Cav1 Ckap4 Depdc1b Dlg5 Dsg1 Dst Epha2 Fam83b Fbp17 Fnbp1 Frs2 Frs3 Golga3 Grlf1 Kidins220 Kif14 Ktn1 Muc13 Nisch Nudc P190A Pik3r1 Pik3r2 Pkp4 Plxnd1 Prag1 Pragmin Ptpn13 Rbm39 Rbmx Rbmxrt Rnd2 Scrib Snt2 Soc Tfrc Tnfaip1 Trfr Trp Txnl1 Ubxd5 Ubxn11 Uhrf1bp1l Vangl1 Vangl2 Wdr6 p190ARHOGAP	Rattus norvegicus (Norway rat)
RND1 GTPase cycle	Aldehyde dehydrogenase family 3 member A2 Ankyrin repeat domain containing 26 Carboxypeptidase D Caveolin-1 Coiled coil domain containing 88A DEP domain containing 1B Desmoplakin Discs large MAGUK scaffold protein 5 Dystonin Epithelial-stromal interaction protein 1 Family with sequence similarity 135, member A Family with sequence similarity 83, member B Fibroblast growth factor receptor substrate 2 Fibroblast growth factor receptor substrate 3 Flotillin-2 Growth factor receptor-bound protein 7 Kinase D-interacting substrate of 220 kDa Kinesin family member 14 Mucin-13 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Plakophilin 4 Pleckstrin homology domain-containing family G member 5 Plexin A1 RAS protein activator like 2 RAS related 2 RNA binding motif protein 39 RNA-binding motif protein, X chromosome Rho GTPase activating protein 5 Rho GTPase-activating protein 35 Rho family GTPase 1 Stathmin-2 Stress-induced-phosphoprotein 1 Thioredoxin-like protein 1 Transferrin receptor protein 1 Transmembrane protein 59 Tyrosine-protein phosphatase non-receptor type 13 UBX domain-containing protein 11 Vang-like protein 2 Vang-like protein receptor protein-tyrosine kinase tRNA (34-2'-O)-methyltransferase regulator WDR6	A0A0G2K7N9 A0A8I5ZQD4 A0A8I5ZQV8 A0A8I6A5W7 A0A8I6A880 A0A8I6AGW9 A0A8I6AI87 A0A8I6GLX4 A0A8J8XIU8 D3ZBN3 D3ZE01 D3ZF70 D3ZKC8 D3ZTP3 D4A244 D4AA32 F1LMV6 G3V9S3 M0R3T8 O35814 P21818 P30839 P41350 P81128 P84889 P97881 Q4V898 Q52RG8 Q5BJU0 Q5BK43 Q5FVG9 Q5XFW6 Q63787 Q63788 Q6RFZ7 Q8R512 Q920J4 Q99376 Q9EQG6 Q9JHW1 Q9QZC5 Q9Z2S9	Aldh3a2 Aldh4 Ankrd26 Arhgap35 Arhgap5 Arms Cav Cav1 Ccdc88a Cpd Depdc1b Dlg5 Dsp Dst Epha2 Epsti1 Fam135a Fam83b Flot2 Frs2 Frs3 Grb7 Grlf1 Hop Kidins220 Kif14 Muc13 P190A Pik3r1 Pik3r2 Pkp4 Plekhg5 Plxna1 Ptpn13 RGD1310313 Rasal2 Rbm39 Rbmx Rbmxrt Reg1 Rnd1 Rras2 Scg10 Scgn10 Snt2 Soc Stip1 Stmn2 Tech Tfrc Tmem59 Trfr Trp Txnl1 Ubxd5 Ubxn11 Vangl1 Vangl2 Wdr6 p190ARHOGAP	Rattus norvegicus (Norway rat)
RNA polymerase II transcribes snRNA genes	Arsenite-resistance protein 2 Ccnk protein Cyclin T2 Cyclin-T1 Cyclin-dependent kinase 7 (Fragment) Cyclin-dependent kinase 9 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase subunit beta DNA-directed RNA polymerase subunit DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Elongation factor for RNA polymerase II 2 Elongation factor for RNA polymerase II General transcription factor IIE subunit 1 General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Integrator complex subunit 10 Integrator complex subunit 11 Integrator complex subunit 12 Integrator complex subunit 13 Integrator complex subunit 14 Integrator complex subunit 1 Integrator complex subunit 2 Integrator complex subunit 3 Integrator complex subunit 4 Integrator complex subunit 5 Integrator complex subunit 6 Integrator complex subunit 7 Integrator complex subunit 8 Integrator complex subunit 9 Interactor of little elongation complex ELL subunit 1 Interactor of little elongation complex ELL subunit 2 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 PCF11 cleavage and polyadenylation factor subunit POU domain protein POU domain, class 2, transcription factor 1 (Fragment) Phosphorylated adapter RNA export protein RNA polymerase II elongation factor ELL3 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 RNA polymerase II subunit B1 CTD phosphatase Rpap2 RNA polymerase II subunit C RNA polymerase II subunit D RNA polymerase II subunit I RNA polymerase II subunit J Regulation of nuclear pre-mRNA domain containing 2 Regulation of nuclear pre-mRNA domain-containing protein Regulation of nuclear pre-mRNA domain-containing protein SOSS complex subunit B1 SOSS complex subunit B2 Small nuclear RNA activating complex, polypeptide 1 Small nuclear RNA activating complex, polypeptide 4 TATA-box binding protein associated factor 13 TATA-box binding protein associated factor 5 TATA-box-binding protein Transcription elongation factor SPT4 Transcription elongation factor SPT5 Transcription factor Sp1 Transcription initiation factor IIA subunit 1 Transcription initiation factor IIA subunit 2 Transcription initiation factor IIB Transcription initiation factor IIE subunit beta Transcription initiation factor TFIID subunit 11 Transcription initiation factor TFIID subunit 6 Transcription initiation factor TFIID subunit 8 Transcription initiation factor TFIID subunit 9 Zinc finger CCCH type containing 8 snRNA-activating protein complex subunit 2 snRNA-activating protein complex subunit 3	A0A096MJ28 A0A0G2JXM2 A0A0G2K0V1 A0A0G2K8E5 A0A8I5ZQE1 A0A8I5ZR84 A0A8I5ZWB2 A0A8I5ZXX1 A0A8I6A150 A0A8I6A2X2 A0A8I6A4F7 A0A8I6A5G5 A0A8I6A799 A0A8I6A9T0 A0A8I6AHR3 A0A8I6AM26 A0A8I6AP01 A0A8I6AXL7 A0A8I6G5J7 A0A8I6GJT1 A1L1L5 B0BNE2 B1WC40 B2RYQ7 B5DEK0 B5DEM7 D3ZCP9 D3ZGL6 D3ZH66 D3ZIQ8 D3ZQI0 D3ZTW1 D3ZUT9 D4A5A6 D4AAU4 D4ADS6 F1LYZ6 F1M8D7 F7ES94 F7FCG9 G3V8Y5 G3V992 M0RBH0 M0RCG9 O08949 O08950 O88828 P31503 P51952 P62489 P62916 Q01714 Q01750 Q3MHC2 Q3SWT1 Q4KLK9 Q56A27 Q5BK68 Q5BKE0 Q5EB90 Q5FVP2 Q5I0E6 Q5U1X0 Q5XFX8 Q63068 Q63801 Q641Z4 Q66H58 Q68FR3 Q68FX5 Q6AY96	AABR07064983.1 AC109542.1 Cak Cak1 Cbp20 Cbp80 Ccnk Ccnt1 Ccnt2 Cdk7 Cdk9 Cpsf3l Ell Ell2 Ell3 Gtf2a1 Gtf2a2 Gtf2b Gtf2e1 Gtf2e2 Gtf2f1 Gtf2f2 Ice1 Ice2 Ints1 Ints10 Ints11 Ints12 Ints13 Ints14 Ints2 Ints3 Ints4 Ints5 Ints6 Ints7 Ints8 Ints9 LOC120098305 Mo15 Nabp1 Nabp2 Narg2 Ncbp1 Ncbp2 Obfc2a Obfc2b Oct-1 Otf-1 Otf1 Pcf11 Phax Phf22 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2i Polr2j Pou2f1 Pou2f2 RGD1562299 Rap30 Rnuxa Rpap2 Rprd1a Rprd1b Rprd2 Snapc1 Snapc2 Snapc3 Snapc4 Sp1 Srrt Ssb1 Ssb2 Ssu72 Supt4h1 Supt5h Taf11 Taf13 Taf2e Taf2g Taf5 Taf6 Taf8l1 Taf9 Tafii31 Tbp Vwa9 Zc3h8	Rattus norvegicus (Norway rat)
RNA Polymerase II Transcription Termination	ATP-dependent RNA helicase DDX39A Aly/REF export factor Cdc40 protein Chromatin target of PRMT1 protein Cleavage and polyadenylation specific factor 1 Cleavage and polyadenylation specific factor 3 Cleavage and polyadenylation specificity factor subunit 2 Cleavage and polyadenylation specificity factor subunit 4 Cleavage and polyadenylation specificity factor subunit 5 Cleavage and polyadenylation specificity factor subunit 6 Cleavage and polyadenylation specificity factor subunit 7 Cleavage stimulation factor subunit 1 Cleavage stimulation factor subunit 2, tau variant Cleavage stimulation factor subunit 2 Cleavage stimulation factor subunit 3 DNA polymerase delta interacting protein 3 Eukaryotic initiation factor 4A-III LSM10, U7 small nuclear RNA associated Mago homolog B, exon junction complex subunit Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 PCF11 cleavage and polyadenylation factor subunit Poly(A) binding protein, nuclear 1 Poly(A) polymerase Polyribonucleotide 5'-hydroxyl-kinase Clp1 Pre-mRNA 3'-end-processing factor FIP1 Pre-mRNA-splicing factor SLU7 Protein CASC3 Protein mago nashi homolog RNA helicase RNA-binding protein 8A RNA-binding protein with serine-rich domain 1 RRM domain-containing protein SAP domain-containing ribonucleoprotein Serine and arginine repetitive matrix 1 Serine and arginine rich splicing factor 11 Serine and arginine rich splicing factor 3 Serine and arginine rich splicing factor 7 Serine/arginine-rich splicing factor 1 Serine/arginine-rich splicing factor 2 Serine/arginine-rich splicing factor 5 Serine/arginine-rich splicing factor 9 Sm protein F Small nuclear ribonucleoprotein E Small nuclear ribonucleoprotein G Small nuclear ribonucleoprotein Sm D3 Small nuclear ribonucleoprotein-associated protein B Spliceosome RNA helicase Ddx39b Splicing factor U2AF 26 kDa subunit Splicing factor U2AF subunit Stem-loop binding protein Symplekin scaffold protein THO complex subunit 2 THO complex subunit 5 homolog THO complex subunit 6 homolog THO complex subunit 7 homolog U2 small nuclear RNA auxiliary factor 1 UAP56-interacting factor UPF3B, regulator of nonsense mediated mRNA decay Zinc finger protein 473	A0A0G2JXM5 A0A0G2JYV2 A0A0G2K1E5 A0A0G2K8V3 A0A0G2KA08 A0A0G2QC38 A0A0U1RRP3 A0A8I5ZSN8 A0A8I5ZTR8 A0A8I5ZV21 A0A8I5ZV38 A0A8I5ZW25 A0A8I6A2P1 A0A8I6A5F1 A0A8I6A9Y1 A0A8I6ABD9 A0A8I6AFZ5 A0A8I6AI37 A0A8I6AMJ9 A0A8I6G751 A0A8I6GJT1 A0A8I6GMR8 A0A8J8XR33 B1WC40 B2RYC1 B2RYU1 B3DM97 B5DEP7 D3ZSP1 D4A321 D4AAT4 F1LTH0 F1M0X6 F1M4W7 M0RBB1 P17136 Q09167 Q27W01 Q27W02 Q3B8Q2 Q498T2 Q498U4 Q4KM65 Q56A27 Q5BJQ6 Q5FVR7 Q5PPI1 Q5PQL4 Q5U216 Q5U317 Q5XI29 Q63413 Q68FX7 Q6AY87 Q6AYK1 Q6PDU1 Q7TP17 Q7TQ84 Q80ZG5 Q8K3X0	AABR07026797.1 Alyref Bat1 Bat1a Casc3 Cbp20 Cbp80 Cdc40 Chtop Cl-4 Clp1 Cpsf1 Cpsf2 Cpsf3 Cpsf4 Cpsf5 Cpsf6 Cpsf7 Cstf1 Cstf2 Cstf2t Cstf3 Ddx39 Ddx39a Ddx39b Ddx48 Ddxl Dhx38 Eif4a3 Fip1l1 Fmip Fop Fyttd1 Hcc1 Hrs LOC687679 Lsm10 Magoh Magohb Mln51 Ncbp1 Ncbp2 Nudt21 Pabpn1 Papola Pcf11 Pdrp Poldip3 Rbm8 Rbm8a Rnps1 SNRPD3 Sarnp Sfrs2 Sfrs5 Sfrs9 Slbp Slu7 Snrpb Snrpd3 Snrpe Snrpepl2 Snrpf Snrpg Snrpgl1 Srrm1 Srsf1 Srsf11 Srsf2 Srsf3 Srsf5 Srsf7 Srsf9 Sympk Thoc2 Thoc5 Thoc6 Thoc7 U2af1 U2af1l4 U2af2 Uap56 Uif Upf3b Zfp473 wdr58	Rattus norvegicus (Norway rat)

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