GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **351 - 375** of **1070** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Regulation of RUNX1 Expression and Activity	Core-binding factor subunit beta Cyclin-dependent kinase 6 G1/S-specific cyclin-D1 G1/S-specific cyclin-D2 G1/S-specific cyclin-D3 PML nuclear body scaffold Runt-related transcription factor 1 Tyrosine-protein phosphatase non-receptor type 11	A0A8I6AC37 A0A8I6GMB2 F1MA87 P39948 P41499 P48961 Q04827 Q63046	Aml1 Cbfa2 Cbfb Ccnd1 Ccnd2 Ccnd3 Cdk6 Pml Ptpn11 Runx1 Vin-1	Rattus norvegicus (Norway rat)
Ion influx/efflux at host-pathogen interface	Copper transport protein ATOX1 Copper-transporting ATPase 1 Natural resistance-associated macrophage protein 1 PDZ domain-containing protein 11	A0A8I6A9Z8 P70553 P70705 Q9WUC4	Atox1 Atp7a Bcg Mnk Nramp1 Pdzd11 Rah1 Slc11a1	Rattus norvegicus (Norway rat)
Condensation of Prophase Chromosomes	Condensin-2 complex subunit D3 Condensin-2 complex subunit H2 Cyclin-dependent kinase 1 G2/mitotic-specific cyclin-B1 Histone H2A type 2-A Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H4 Microcephalin Non-SMC condensin II complex, subunit G2 PHD finger protein 8 Protein SET Retinoblastoma-associated protein Serine/threonine-protein kinase PLK1 Structural maintenance of chromosomes protein Structural maintenance of chromosomes protein [histone H4]-lysine(20) N-methyltransferase	A0A0G2JXI9 A0A140UHX3 A0A8I5ZSA8 A0A8I5ZYY0 A0A8I6A2W1 A0A8I6A7P3 A0A8I6AFW8 A0A8I6AWT3 A0A8I6G659 A0A8I6GK63 A0A8I6GKG3 A9UMV8 D3ZJM7 D3ZVK7 D3ZXP3 D4A5Q2 D4AAL2 D4ACM0 D4AD31 G3V9C7 M0RBQ5 P0CC09 P30277 P33568 P39951 P62804 Q00729 Q4V8I2 Q62673 Q63945	Ccnb1 Cdc2 Cdc2a Cdk1 Cdkn1 ENSRNOG00000062927 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 H2ab3 H2ac10 H2ac18 H2ac4 H2afb3 H2afx H2aj H2ax H2az2 H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H4c16 H4c2 H4f16 H4ft Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist2h2aa3 Hist4 Hist4h4 Kmt5a LOC100365043 LOC100910200 LOC120097726 LOC684797 Mcph1 Ncapd3 Ncapg2 Ncaph2 Phf8 Plk Plk1 Rb-1 Rb1 Set Smc2 Smc4 Th2b	Rattus norvegicus (Norway rat)
Serotonin Neurotransmitter Release Cycle	Complexin-1 Liprin-alpha-3 Liprin-alpha-4 (Fragment) PTPRF interacting protein alpha 1 PTPRF interacting protein alpha 2 Peripheral-type benzodiazepine receptor-associated protein 1 Protein unc-13 homolog B Ras-related protein Rab-3A Regulating synaptic membrane exocytosis protein 1 Synapsin-1 Synapsin-2 Synapsin-3 Synaptic vesicular amine transporter Synaptosomal-associated protein 25 Synaptotagmin-1 Syntaxin-1A Syntaxin-binding protein 1 Vesicle-associated membrane protein 2	A0A1B0GWS0 A0A8I6AK94 O70441 P09951 P21707 P32851 P60881 P61765 P63012 P63041 P63045 Q01827 Q62769 Q63537 Q91Z79 Q91Z80 Q9JIR0 Q9JIR4	Bzrap1 Cplx1 Ppfia1 Ppfia2 Ppfia3 Ppfia4 Rab3a Rbp1 Rim1 Rims1 Sap Slc18a2 Snap Snap25 Stx1a Stxbp1 Svat Syb2 Syn1 Syn2 Syn3 Syt1 Tspoap1 Unc13b Unc13h2 Unc18a Vamp2 Vmat2	Rattus norvegicus (Norway rat)
GABA synthesis, release, reuptake and degradation	Complexin-1 DnaJ homolog subfamily C member 5 Glutamate decarboxylase 1 Glutamate decarboxylase 2 Heat shock cognate 71 kDa protein Ras-related protein Rab-3A Regulating synaptic membrane exocytosis protein 1 Synaptosomal-associated protein 25 Synaptotagmin-1 Syntaxin-1A Syntaxin-binding protein 1 Vesicle-associated membrane protein 2 Vesicular inhibitory amino acid transporter	O35458 P18088 P21707 P32851 P60881 P60905 P61765 P63012 P63018 P63041 P63045 Q05683 Q9JIR4	Cplx1 Dnajc5 Gad1 Gad2 Gad65 Gad67 Hsc70 Hsc73 Hspa8 Rab3a Rim1 Rims1 Sap Slc32a1 Snap Snap25 Stx1a Stxbp1 Syb2 Syt1 Unc18a Vamp2 Vgat Viaat	Rattus norvegicus (Norway rat)
Terminal pathway of complement	Complement C5 Complement component C6	P08650 Q811M5	C5 C6	Rattus norvegicus (Norway rat)
Alternative complement activation	Complement C3	P01026	C3	Rattus norvegicus (Norway rat)
Activation of C3 and C5	Complement C2 Complement C3 Complement C4 Complement C4B (Chido blood group) Complement C5	A0A8J8YKQ8 P01026 P08649 P08650 Q6MG90	C2 C3 C4 C4a C4b C5 Cfb	Rattus norvegicus (Norway rat)
Interleukin receptor SHC signaling	Colony stimulating factor 2 receptor subunit beta GRB2-associated-binding protein 2 Granulocyte-macrophage colony-stimulating factor Growth factor receptor-bound protein 2 Interleukin 3 receptor subunit alpha Interleukin-2 receptor subunit alpha Interleukin-2 receptor subunit beta Interleukin-2 Interleukin-3 Interleukin-5 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 3-kinase regulatory subunit gamma Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform SHC-transforming protein 1 SOS Ras/Rac guanine nucleotide exchange factor 1 Tyrosine-protein kinase JAK2 Tyrosine-protein kinase JAK3 Tyrosine-protein kinase Tyrosine-protein phosphatase non-receptor type 6 phosphatidylinositol-4,5-bisphosphate 3-kinase	A0A0G2K344 A0A8I5Y949 A0A8I6AM23 D4A3T0 E9PSX4 G3V608 P04823 P17108 P26896 P26897 P48750 P62994 P81718 P97573 Q08125 Q5M824 Q62689 Q63272 Q63787 Q63788 Q63789 Q9EQH1 Q9WVR3 Q9Z1L0	Ash Csf2 Csf2rb Csfgm Gab2 Grb2 Il-2 Il-3 Il-5 Il2 Il2ra Il2rb Il3 Il3ra Il5 Inpp5d Inppl1 Jak1 Jak2 Jak3 Pik3ca Pik3cb Pik3cd Pik3r1 Pik3r2 Pik3r3 Ptph6 Ptpn6 Shc1 Ship Ship1 Ship2 Sos1	Rattus norvegicus (Norway rat)
Lectin pathway of complement activation	Collectin subfamily member 10 Ficolin-1 Ficolin-2 Mannan-binding lectin serine protease 1 Mannan-binding lectin serine protease 2 Mannose-binding protein C	D4A7F6 P08661 P57756 Q8CHN8 Q9JJS8 Q9WTS8	Colec10 Crarf Fcn1 Fcn2 Fcna Fcnb Masp1 Masp2 Masp3 Mbl2	Rattus norvegicus (Norway rat)	G49108TO G57321FI
Initial triggering of complement	Collectin subfamily member 10 Complement C1q subcomponent subunit A Complement C1q subcomponent subunit B Complement C1q subcomponent subunit C Complement C1s subcomponent Complement C2 Complement C4 Complement C4B (Chido blood group) Ficolin-1 Ficolin-2 Ig gamma-1 chain C region Ig gamma-2C chain C region Ig kappa chain V-II region RPMI 6410-like Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Ig-like domain-containing protein Immunoglobulin V-set domain-containing protein Immunoglobulin V-set domain-containing protein Immunoglobulin V-set domain-containing protein Immunoglobulin heavy variable V12-3 Immunoglobulin kappa variable like, pseudogene 6 Immunoglobulin lambda constant 1 Immunoglobulin lambda-like polypeptide 1 MCG142154-like Mannan-binding lectin serine protease 1 Mannan-binding lectin serine protease 2 Mannose-binding protein C Similar to immunoglobulin light chain variable region Similar to immunoglobulin light chain complement subcomponent C1r	A0A0G2JW41 A0A0G2JY98 A0A0G2JZL1 A0A0G2K066 A0A0G2K180 A0A0G2K3L5 A0A0G2K828 A0A0G2K8K8 A0A0G2K980 A0A0G2K9L1 A0A0G2K9Z5 A0A8I5Y130 A0A8I5Y662 A0A8I5Y735 A0A8I5Y7P7 A0A8I5Y806 A0A8I5Y9R1 A0A8I5Y9S1 A0A8I5YBU3 A0A8I5YC48 A0A8I5ZLU0 A0A8I5ZMM5 A0A8I5ZN60 A0A8I5ZNF0 A0A8I5ZNL8 A0A8I5ZNW4 A0A8I5ZPH3 A0A8I5ZRU2 A0A8I5ZTK7 A0A8I5ZVJ7 A0A8I5ZX10 A0A8I5ZX42 A0A8I5ZY02 A0A8I5ZYE2 A0A8I5ZYV4 A0A8I6A2E5 A0A8I6A3F2 A0A8I6A6C3 A0A8I6A7L1 A0A8I6A935 A0A8I6A938 A0A8I6A9W1 A0A8I6AA60 A0A8I6AAM9 A0A8I6ABH0 A0A8I6AC42 A0A8I6ACJ3 A0A8I6ACY1 A0A8I6AD89 A0A8I6AEB7 A0A8I6AEV5 A0A8I6AFL1 A0A8I6AFR0 A0A8I6AGR0 A0A8I6AH36 A0A8I6AHB9 A0A8I6AHQ4 A0A8I6AHX0 A0A8I6AI41 A0A8I6AJ98 A0A8I6AJF8 A0A8I6AK51 A0A8I6AKK2 A0A8I6ALZ6 A0A8I6AM09 A0A8I6AMX1 A0A8I6ANN1 A0A8I6AP25 A0A8I6AQD7 A0A8I6ASD7 A0A8I6AVW1 A0A8I6G3M2 A0A8I6G7J3 A0A8I6G8Z3 A0A8I6GC23 A0A8I6GE36 A0A8I6GHG7 A0A8I6GL55 A0A8I6GLJ8 A0A8J8YKQ8 D3ZE08 D3ZMS7 D3ZMY4 D3ZPL2 D4A1T6 D4A7F6 F1LWD0 F1LYF1 F1LYU3 F1M7B3 F1MAM7 M0R5K1 M0R7F5 M0RBD5 M0RDZ5 P08649 P08661 P20759 P20762 P31720 P31721 P31722 P57756 Q6MG90 Q6P6T1 Q8CHN8 Q9JJS8 Q9WTS8	AABR07034730.2 AABR07060971.1 AABR07061001.1 AABR07065782.1 AABR07065808.1 AABR07065812.2 AABR07065813.1 C1qa C1qb C1qc C1qg C1r C1s C2 C4 C4a C4b Cfb Colec10 Crarf ENSRNOG00000062324 ENSRNOG00000062682 ENSRNOG00000062762 ENSRNOG00000062853 ENSRNOG00000062915 ENSRNOG00000062976 ENSRNOG00000063148 ENSRNOG00000063329 ENSRNOG00000063340 ENSRNOG00000063341 ENSRNOG00000063422 ENSRNOG00000063550 ENSRNOG00000063572 ENSRNOG00000063707 ENSRNOG00000063791 ENSRNOG00000064041 ENSRNOG00000064061 ENSRNOG00000064085 ENSRNOG00000064245 ENSRNOG00000064481 ENSRNOG00000064582 ENSRNOG00000065160 ENSRNOG00000065181 ENSRNOG00000065191 ENSRNOG00000065237 ENSRNOG00000065406 ENSRNOG00000065564 ENSRNOG00000065629 ENSRNOG00000065670 ENSRNOG00000065675 ENSRNOG00000065690 ENSRNOG00000065855 ENSRNOG00000066010 ENSRNOG00000066072 ENSRNOG00000066203 ENSRNOG00000066380 ENSRNOG00000066406 ENSRNOG00000066431 ENSRNOG00000066785 ENSRNOG00000066812 ENSRNOG00000066814 ENSRNOG00000066904 ENSRNOG00000066922 ENSRNOG00000066926 ENSRNOG00000066971 ENSRNOG00000067010 ENSRNOG00000067025 ENSRNOG00000067233 ENSRNOG00000067273 ENSRNOG00000067516 ENSRNOG00000067603 ENSRNOG00000067643 ENSRNOG00000067679 ENSRNOG00000067883 ENSRNOG00000068055 ENSRNOG00000068059 ENSRNOG00000068381 ENSRNOG00000068499 ENSRNOG00000068847 ENSRNOG00000069193 ENSRNOG00000069427 ENSRNOG00000069491 ENSRNOG00000069766 ENSRNOG00000069828 ENSRNOG00000069901 ENSRNOG00000069940 ENSRNOG00000070091 ENSRNOG00000070192 ENSRNOG00000070244 ENSRNOG00000070247 ENSRNOG00000070810 ENSRNOG00000070812 ENSRNOG00000070816 ENSRNOG00000070832 ENSRNOG00000070933 ENSRNOG00000071049 ENSRNOG00000071091 Fcn1 Fcn2 Fcna Fcnb Igkv2-112l1 Igkv8-30l1 Igkvl-ps6 Igkvl10 Igkvl12 Igkvl13 Igkvl2 Iglc1 Igll1 LOC100363522 LOC100365500 LOC100911032 LOC102551948 LOC690813 Masp1 Masp2 Masp3 Mbl2 RGD1561722 RGD1564696 r-gsp	Rattus norvegicus (Norway rat)	G49108TO G57321FI
Signaling by PDGF	Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type IV alpha 5 chain Furin Osteopontin Plasminogen Platelet-derived growth factor C Platelet-derived growth factor D Platelet-derived growth factor receptor alpha Platelet-derived growth factor receptor beta Platelet-derived growth factor subunit A Platelet-derived growth factor subunit B (Fragment) Thrombospondin 1 Thrombospondin 2 Thrombospondin 3 Thrombospondin-4 Tissue-type plasminogen activator Tyrosine-protein phosphatase non-receptor type 12	A0A0G2JV24 A0A0G2K742 A0A8I5ZZ86 A0A8I6G4F0 D4A2G6 F1LRJ1 F1M6Q3 F1MA59 G3V7Q4 P08721 P19637 P20786 P23377 P28576 P49744 Q01177 Q05028 Q05030 Q9EQT1 Q9EQX6	2b7 Col4a1 Col4a2 Col4a3 Col4a4 Col4a5 Fur Furin Iegf LOC100911572 Pcsk3 Pdgfa Pdgfb Pdgfc Pdgfd Pdgfr Pdgfr1 Pdgfra Pdgfrb Plat Plg Ptpn12 Rpa1 Scdgf Scdgfb Spp-1 Spp1 Thbs1 Thbs2 Thbs3 Thbs4 Tsp-4 Tsp4	Rattus norvegicus (Norway rat)
Collagen chain trimerization	Collagen alpha-1(I) chain Collagen alpha-1(II) chain Collagen alpha-1(III) chain Collagen alpha-1(V) chain Collagen alpha-1(XI) chain Collagen alpha-1(XXIII) chain Collagen alpha-2(I) chain Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type IV alpha 5 chain Collagen type IV alpha 6 chain Collagen type V alpha 2 chain Collagen type V alpha 3 chain Collagen type VII alpha 1 chain Collagen type VIII alpha 1 chain Collagen type VIII alpha 2 chain Collagen type X alpha 1 chain Collagen type XI alpha 2 chain Collagen type XIII alpha 1 chain Collagen type XIV alpha 1 chain Collagen type XIX alpha 1 chain Collagen type XV alpha 1 chain Collagen type XVI alpha 1 chain Collagen type XVII alpha 1 chain Collagen type XVIII alpha 1 chain Collagen type XX alpha 1 chain Collagen type XXII alpha 1 chain Collagen type XXV alpha 1 chain Collagen type XXVI alpha 1 chain Collagen type XXVIII alpha 1 chain	A0A0G2JV12 A0A0G2K069 A0A0G2K2Q8 A0A0G2K601 A0A0G2K742 A0A0G2K7A5 A0A0G2K8N4 A0A8I5ZZ86 A0A8I6GBI7 A0A8I6GLR1 D3ZCQ0 D3ZE04 D3ZII5 D3ZN64 D3ZZT9 D4AC70 D4ADG9 F1LND0 F1LQ00 F1LRJ1 F1M6Q3 F1M897 F1MA59 F7EVZ0 M0RAM0 P02454 P02466 P05539 P13941 P20909 Q810Y4 Q9JI03	Col10a1 Col11a1 Col11a2 Col13a1 Col14a1 Col15a1 Col16a1 Col17a1 Col18a1 Col19a1 Col1a1 Col1a2 Col20a1 Col22a1 Col23a1 Col25a1 Col26a1 Col28a1 Col2a1 Col3a1 Col4a1 Col4a2 Col4a3 Col4a4 Col4a5 Col4a6 Col5a1 Col5a2 Col5a3 Col7a1 Col8a1 Col8a2 LOC100909752 LOC100911572 LOC687064 RGD1564680	Rattus norvegicus (Norway rat)
Uptake of dietary cobalamins into enterocytes	Cobalamin binding intrinsic factor Cubilin Protein amnionless	D3ZFK9 O70244 P17267	Amn Cblif Cubn Gif Ifcr	Rattus norvegicus (Norway rat)
Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation	Coagulation factor VIII Protein-S-isoprenylcysteine O-methyltransferase Protein-tyrosine sulfotransferase 1 Protein-tyrosine sulfotransferase 2 protein-ribulosamine 3-kinase protein-ribulosamine 3-kinase	B2RYN1 D3ZEB1 D3ZZU8 Q3KR92 Q5RJS8 Q9WVM4	F8 Fn3k Fn3krp Icmt Tpst1 Tpst2	Rattus norvegicus (Norway rat)
Extrinsic Pathway of Fibrin Clot Formation	Coagulation factor IX Coagulation factor VII Coagulation factor X Tissue factor pathway inhibitor Tissue factor	P16296 P42533 Q02445 Q63207 Q8K3U6	Cf3 Cf9 F10 F3 F7 F9 Tfpi	Rattus norvegicus (Norway rat)
Gamma-carboxylation of protein precursors	Coagulation factor IX Coagulation factor VII Coagulation factor X Osteocalcin Protein Z, vitamin K-dependent plasma glycoprotein Prothrombin Vitamin K-dependent gamma-carboxylase Vitamin K-dependent protein C Vitamin K-dependent protein S	G3V8K8 O88496 P04640 P16296 P18292 P31394 P53813 Q63207 Q8K3U6	Bglap Bglap2 Cf9 F10 F2 F7 F9 Ggcx Proc Pros Pros1 Proz	Rattus norvegicus (Norway rat)
Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus	Coagulation factor IX Coagulation factor VII Coagulation factor X Growth arrest-specific protein 6 Osteocalcin Protein Z, vitamin K-dependent plasma glycoprotein Prothrombin Vitamin K-dependent protein C Vitamin K-dependent protein S	G3V8K8 P04640 P16296 P18292 P31394 P53813 Q63207 Q63772 Q8K3U6	Bglap Bglap2 Cf9 F10 F2 F7 F9 Gas6 Proc Pros Pros1 Proz	Rattus norvegicus (Norway rat)
Removal of aminoterminal propeptides from gamma-carboxylated proteins	Coagulation factor IX Coagulation factor VII Coagulation factor X Furin Growth arrest-specific protein 6 Osteocalcin Protein Z, vitamin K-dependent plasma glycoprotein Prothrombin Vitamin K-dependent protein C Vitamin K-dependent protein S	G3V8K8 P04640 P16296 P18292 P23377 P31394 P53813 Q63207 Q63772 Q8K3U6	Bglap Bglap2 Cf9 F10 F2 F7 F9 Fur Furin Gas6 Pcsk3 Proc Pros Pros1 Proz	Rattus norvegicus (Norway rat)
Processing of Capped Intron-Containing Pre-mRNA	Cleavage and polyadenylation specific factor 1 Cleavage and polyadenylation specific factor 3 Cleavage and polyadenylation specificity factor subunit 2 Cleavage and polyadenylation specificity factor subunit 4 Cleavage and polyadenylation specificity factor subunit 5 Cleavage and polyadenylation specificity factor subunit 6 Cleavage and polyadenylation specificity factor subunit 7 Cleavage stimulation factor subunit 1 Cleavage stimulation factor subunit 2, tau variant Cleavage stimulation factor subunit 2 Cleavage stimulation factor subunit 3 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase subunit beta DNA-directed RNA polymerase subunit DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC5 Fus RNA binding protein General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 Heterogeneous nuclear ribonucleoprotein A1 Heterogeneous nuclear ribonucleoprotein A3-like Heterogeneous nuclear ribonucleoprotein C Heterogeneous nuclear ribonucleoprotein D0 Heterogeneous nuclear ribonucleoprotein F Heterogeneous nuclear ribonucleoprotein H2 Heterogeneous nuclear ribonucleoprotein H Heterogeneous nuclear ribonucleoprotein K Heterogeneous nuclear ribonucleoprotein L Heterogeneous nuclear ribonucleoprotein R, pseudogene 2 Heterogeneous nuclear ribonucleoprotein R Heterogeneous nuclear ribonucleoprotein U Heterogeneous nuclear ribonucleoproteins A2/B1 Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 PCF11 cleavage and polyadenylation factor subunit Poly(A) binding protein, nuclear 1 Poly(A) polymerase Poly(rC) binding protein 1 Poly(rC) binding protein 2 Polypyrimidine tract-binding protein 1 Polyribonucleotide 5'-hydroxyl-kinase Clp1 Pre-mRNA 3'-end-processing factor FIP1 Pre-mRNA-splicing regulator WTAP RNA polymerase II subunit C RNA polymerase II subunit D RNA polymerase II subunit I RNA polymerase II subunit J RNA-binding motif protein, X chromosome RNA-binding protein 10 RRM domain-containing protein Serine and arginine rich splicing factor 10 Serine and arginine rich splicing factor 11 Serine and arginine rich splicing factor 12 Serine and arginine rich splicing factor 3 Serine and arginine rich splicing factor 7 Serine and arginine rich splicing factor 8 Serine/arginine-rich splicing factor 1 Serine/arginine-rich splicing factor 2 Serine/arginine-rich splicing factor 5 Serine/arginine-rich splicing factor 9 Symplekin scaffold protein Transformer-2 protein homolog beta Y-box-binding protein 1 mRNA m(6)A methyltransferase	A0A0G2JYV2 A0A0G2K1E5 A0A0G2KA08 A0A0G2QC38 A0A8I5ZQ92 A0A8I5ZSN8 A0A8I5ZTR8 A0A8I5ZW25 A0A8I6A2P1 A0A8I6A2X2 A0A8I6A5F1 A0A8I6A854 A0A8I6AB60 A0A8I6AFZ5 A0A8I6AH91 A0A8I6AMJ9 A0A8I6AXL7 A0A8I6G751 A0A8I6GJT1 A0A8I6GMR8 A0A8J8XB26 A0A8J8XR33 A7VJC2 B0BNE2 B1WC40 D3ZPY0 D3ZQI0 D4A5A6 D4A6A2 F1LQ48 F1M4W7 F7FFC6 G3V8Y5 G3V9R8 M0RBH0 M0RCG9 O88828 P04256 P61980 P62489 P62961 P62997 P70501 Q00438 Q01750 Q09167 Q4KM65 Q4V898 Q566E4 Q56A27 Q5BJQ6 Q5EB90 Q5FVR7 Q5PPI1 Q5PQK2 Q5PQL4 Q5U317 Q5XI29 Q6AY09 Q6AY96 Q6AYU2 Q6IMY8 Q6PDU1 Q794E4 Q8VHV7 Q9JJ54	AABR07026797.1 AC109542.1 Auf1 Cbp20 Cbp80 Cl-4 Clp1 Cpsf1 Cpsf2 Cpsf3 Cpsf4 Cpsf5 Cpsf6 Cpsf7 Cstf1 Cstf2 Cstf2t Cstf3 Fblim1 Fip1l1 Fus Gtf2f1 Gtf2f2 Hnrnp Hnrnpa1 Hnrnpa2b1 Hnrnpa3 Hnrnpc Hnrnpd Hnrnpf Hnrnph1 Hnrnph2 Hnrnpk Hnrnpl Hnrnpr Hnrnpr-ps2 Hnrnpu Hnrpa1 Hnrpa2b1 Hnrpc Hnrpd Hnrpf Hnrph Hnrph1 Hnrph2 Hnrpk Hnrpr Hnrpu Hrs LOC100911361 LOC120096281 LOC120098305 Mettl3 Ncbp1 Ncbp2 Nudt21 Pabpn1 Papola Pcbp1 Pcbp2 Pcf11 Polr2a Polr2b Polr2c Polr2d Polr2e Polr2f Polr2g Polr2i Polr2j Ptb Ptbp1 Pybp Rap30 Rbm10 Rbmx Rbmxrt Sfrs10 Sfrs2 Sfrs5 Sfrs9 Srsf1 Srsf10 Srsf11 Srsf12 Srsf2 Srsf3 Srsf5 Srsf7 Srsf8 Srsf9 Sympk Tbfii Tra2b Wtap Yb1 Ybx1	Rattus norvegicus (Norway rat)
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)	Cingulin E3 ubiquitin-protein ligase Junctional adhesion molecule A Partitioning defective 3 homolog Partitioning defective 6 homolog alpha Polyubiquitin-B Polyubiquitin-C Protein kinase C zeta type TGF-beta receptor type-1 TGF-beta receptor type-2 Transforming growth factor beta-1 proprotein Transforming protein RhoA Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2K612 A0A8I6A4L9 A0A8I6A5Y3 P09217 P0CG51 P17246 P38438 P61589 P62982 P80204 Q63429 Q6B4M5 Q9JHY1 Q9Z340	Arha Arha2 Cgn F11r Jam1 LOC100360645 Par-6a Par3 Par6a Pard3 Pard6a Pkcz Prkcz Rhoa Rps27a Smurf1 Tgfb1 Tgfbr1 Tgfbr2 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1	Rattus norvegicus (Norway rat)
Signaling by SCF-KIT	Chymase GRB2-associated-binding protein 2 GRB2-related adaptor protein 2 GRB2-related adaptor protein GTPase HRas GTPase KRas GTPase NRas Growth factor receptor-bound protein 10 Growth factor receptor-bound protein 2 Growth factor receptor-bound protein 7 Kit ligand Mast/stem cell growth factor receptor Matrix metalloproteinase-9 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 3-kinase regulatory subunit gamma Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Protein kinase C alpha type Proto-oncogene tyrosine-protein kinase LCK Proto-oncogene tyrosine-protein kinase Src Proto-oncogene vav Ras-related C3 botulinum toxin substrate 1 SOS Ras/Rac guanine nucleotide exchange factor 1 Serine/threonine-protein kinase Chk1 Signal transducer and activator of transcription 3 Signal transducer and activator of transcription 4 Signal transducer and activator of transcription 5A Signal transducer and activator of transcription 5B Tyrosine-protein kinase Fer Tyrosine-protein kinase Fyn Tyrosine-protein kinase JAK2 Tyrosine-protein kinase Lyn Tyrosine-protein kinase Yes Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein phosphatase non-receptor type 11 protein-tyrosine-phosphatase	A0A0G2JX93 A0A0G2K344 A0A0G2K3H0 A0A8I6A3K6 D4A3T0 D4A584 F1LM93 P05696 P08644 P09760 P0CE43 P20171 P21581 P41499 P50282 P50339 P52631 P52632 P54100 P62994 Q01621 Q04970 Q07014 Q3KR57 Q4KM68 Q62689 Q62771 Q62844 Q63116 Q63787 Q63788 Q63789 Q6RUV5 Q91ZN7 Q9EQH1 Q9QZC5 Q9WUD9	Ash Chek1 Chk1 Cma1 Fer Fert2 Fes Flk Fyn Gab2 Grap Grap2 Grb10 Grb2 Grb7 Hras Hras1 Jak2 KIT Kit Kitl Kitlg Kras Kras2 Lck Lyn Mcpt3 Mgf Mmp9 Nras Pik3ca Pik3r1 Pik3r2 Pik3r3 Pkca Prkca Ptpn11 Ptpru Rac Rac1 Sos1 Src Stat1 Stat3 Stat4 Stat5a Stat5b Tec Vav Vav1 Yes1	Rattus norvegicus (Norway rat)
Switching of origins to a post-replicative state	Chromatin licensing and DNA replication factor 1 Geminin, DNA replication inhibitor	D3ZKD4 D3ZWJ0	Cdt1 Gmnn	Rattus norvegicus (Norway rat)
Na+/Cl- dependent neurotransmitter transporters	Chromaffin granule amine transporter Sodium- and chloride-dependent GABA transporter 1 Sodium- and chloride-dependent GABA transporter 2 Sodium- and chloride-dependent GABA transporter 3 Sodium- and chloride-dependent betaine transporter Sodium- and chloride-dependent glycine transporter 1 Sodium- and chloride-dependent glycine transporter 2 Sodium- and chloride-dependent taurine transporter Sodium- and chloride-dependent transporter XTRP3 Sodium-dependent dopamine transporter Sodium-dependent neutral amino acid transporter B(0)AT1 Sodium-dependent neutral amino acid transporter B(0)AT2 Sodium-dependent neutral amino acid transporter B(0)AT3 Sodium-dependent proline transporter Solute carrier family 22 member 1 Solute carrier family 22 member 2 Synaptic vesicular amine transporter Transporter Transporter	A0A8I6A5L0 F1LQW0 P23977 P23978 P28572 P28573 P31643 P31646 P31647 P48056 P58295 Q01818 Q01827 Q08469 Q2A865 Q62687 Q63089 Q64093 Q9R0W2	B0at1 B0at3 Cgat Gabt1 Gabt2 Gabt3 Gat-1 Gat-2 Gat-3 Gat-b Gat1 Glyt2 Ntt73 Oct1 Oct2 Prot Sit1 Slc18a1 Slc18a2 Slc22a1 Slc22a2 Slc6a1 Slc6a11 Slc6a12 Slc6a13 Slc6a14 Slc6a15 Slc6a18 Slc6a19 Slc6a2 Slc6a20 Slc6a3 Slc6a5 Slc6a6 Slc6a7 Slc6a9 Svat Vmat1 Vmat2 Xtrp2 Xtrp3	Rattus norvegicus (Norway rat)
Transport of bile salts and organic acids, metal ions and amine compounds	Choline transporter-like protein 1 Choline transporter-like protein 2 Choline transporter-like protein 3 Choline transporter-like protein 4 Choline transporter-like protein High affinity choline transporter 1 Multidrug and toxin extrusion protein 1 Sodium-dependent organic anion transporter Urea transporter 1 Urea transporter 2	A0A8I5ZLE8 B4F795 P97689 Q5I0E9 Q62668 Q6AY92 Q6MG71 Q70EX6 Q8VII6 Q9JMD7	Cd92 Cdw92 Cht1 Ctl1 Ctl2 Ctl3 Ctl4 Mate1 Ng22 Slc10a6 Slc14a1 Slc14a2 Slc44a1 Slc44a2 Slc44a3 Slc44a4 Slc44a5 Slc47a1 Slc5a7 Soat TPPT1 UT11 UT3 Ut2	Rattus norvegicus (Norway rat)

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