GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Class B/2 (Secretin family receptors)
  • Adgre1
  • Adgre5
  • Cd55
  • Crf2r
  • Crh
  • Crhbp
  • Crhr
  • Crhr1
  • Crhr2
  • Emr1
  • Pth
  • Pth1r
  • Pth2
  • Pth2r
  • Pthlh
  • Pthr
  • Pthr1
  • Pthr2
  • Pthrp
  • Tip39
  • Tipf39
  • Ucn
  • Ucn2
  • Ucn3
Rattus norvegicus (Norway rat)
Nucleotide catabolism
  • Samhd1
Rattus norvegicus (Norway rat)
Eukaryotic Translation Elongation
  • Eef1a
  • Eef1a1
  • Eef1b2
  • Eef1d
  • Eef1g
Rattus norvegicus (Norway rat)
Glyoxylate metabolism and glycine degradation
  • Agt1
  • Agt2
  • Agxt
  • Agxt2
  • Aldh4a1
  • Dao
  • Dao1
  • Ddo
  • Fbp-cII
  • Gnmt
  • Got2
  • Grhpr
  • Hao1
  • Hoga1
  • Hypdh
  • LOC100911156
  • Maat
  • Prodh2
Rattus norvegicus (Norway rat)
Dopamine receptors
  • Drd2
  • Drd3
  • Drd4
  • Drd5
Rattus norvegicus (Norway rat)
TNFR1-mediated ceramide production
  • Cca1
  • Gnb2l1
  • Nsmaf
  • Rack1
  • Smpd2
  • Smpd3
  • Tnf
  • Tnfa
  • Tnfr-1
  • Tnfr1
  • Tnfrsf1a
  • Tnfsf2
Rattus norvegicus (Norway rat)
CLEC7A (Dectin-1) induces NFAT activation
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Cna2
  • Cnb
  • Nfat4
  • Nfatc1
  • Nfatc2
  • Nfatc3
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
Rattus norvegicus (Norway rat)
IKK complex recruitment mediated by RIP1
  • Birc2
  • Birc3
  • Cd14
  • Chuk
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC100360645
  • Ly96
  • Nemo
  • Plin3
  • Rip3
  • Ripk1
  • Ripk3
  • Rps27a
  • Sarm1
  • Ticam1
  • Ticam2
  • Tlr4
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubc4
  • Ubcep1
  • Ubch4
  • Ubch5b
  • Ubcl1
  • Ube2d1
  • Ube2d2
  • Ube2d3
Rattus norvegicus (Norway rat)
Vitamin B5 (pantothenate) metabolism
  • Aasdhppt
  • Fang1
  • Fasn
  • Gda
  • Pank4
  • Pdzd11
  • Slc25a16
  • Slc25a42
  • Slc5a6
  • Smvt
  • Vnn1
Rattus norvegicus (Norway rat)
Interaction between L1 and Ankyrins
  • Ank1
  • Caml1
  • L1cam
  • Spna2
  • Spnb3
  • Spta1
  • Spta2
  • Sptan1
  • Sptb
  • Sptbn1
  • Sptbn2
  • Sptbn4
  • Sptbn5
Rattus norvegicus (Norway rat)
Activation of IRF3, IRF7 mediated by TBK1, IKKε (IKBKE)
  • Cd14
  • Ikbke
  • Irf3
  • Irf7
  • LOC100360645
  • Ly96
  • Optn
  • Plin3
  • Ptpn11
  • Rps27a
  • Sarm1
  • Tank
  • Tbk1
  • Ticam1
  • Ticam2
  • Tlr4
  • Traf3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Gamma-carboxylation of protein precursors
  • Bglap
  • Bglap2
  • Cf9
  • F10
  • F2
  • F7
  • F9
  • Ggcx
  • Proc
  • Pros
  • Pros1
  • Proz
Rattus norvegicus (Norway rat)
ABC-family proteins mediated transport
  • Abc50
  • Abca8
  • Abcb1
  • Abcb4
  • Abcb5
  • Abcb9
  • Abcc1
  • Abcc10
  • Abcc2
  • Abcc3
  • Abcc4
  • Abcc5
  • Abcc6
  • Abcc7
  • Abcc9
  • Abcf1
  • Cftr
  • Cmoat
  • Cmoat2
  • Cmrp
  • Derl1
  • Derl2
  • Derl3
  • Eif2a
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Erlec1
  • Erlin1
  • Erlin2
  • Kcnj11
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mdr1
  • Mdr1b
  • Mdr2
  • Mecl1
  • Mlp1
  • Mlp2
  • Mrp1
  • Mrp2
  • Mrp3
  • Mrp4
  • Mrp5
  • Mrp6
  • Mss1
  • Os9
  • Pgp3
  • Pgy1
  • Pgy2
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Ring12
  • Rnf185
  • Rnf5
  • Rps27a
  • Sel1h
  • Sel1l
  • Spfh2
  • Sug1
  • Sur2
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vcp
Rattus norvegicus (Norway rat)
Propionyl-CoA catabolism
  • LOC100361295
  • Mcee
  • Mmaa
  • Mmut
  • Mut
  • Pcca
  • Pccb
Rattus norvegicus (Norway rat)
PI3K Cascade
  • Ash
  • FGF15
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-7
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf19
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf8a
  • Fgf9
  • Fgfa
  • Fgfr1
  • Fgfr2
  • Fgfr3
  • Fgfr4
  • Flg
  • Flt3
  • Frs2
  • Gab1
  • Gab2
  • Grb2
  • Irs-1
  • Irs1
  • Irs2
  • Kgf
  • Kl
  • Klb
  • Pik3c3
  • Pik3ca
  • Pik3cb
  • Pik3r1
  • Pik3r2
  • Pik3r4
  • Ptpn11
  • Tlr9
  • Vps34
Rattus norvegicus (Norway rat)
Attachment of GPI anchor to uPAR
  • Cdc91l1
  • Gpaa1
  • Pgap1
  • Pigs
  • Pigt
  • Pigu
  • Plaur
Rattus norvegicus (Norway rat)
Postmitotic nuclear pore complex (NPC) reformation
  • Ahctf1
  • LOC683983
  • Ndc1
  • Nup107
  • Nup121
  • Nup133
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup35
  • Nup37
  • Nup43
  • Nup53
  • Nup85
  • Nup93
  • Nup98
  • Pcnt1
  • Pom121
  • Ran
  • Rangap1
  • Rcc1
  • Sec13
  • Sec13l1
  • Sumo1
  • Tmem48
  • Ubce9
  • Ube2i
Rattus norvegicus (Norway rat)
G2/M DNA damage checkpoint
  • ABRAXAS1
  • Abra1
  • Atm
  • Atr
  • Atrip
  • Babam1
  • Babam2
  • Bard1
  • Blm
  • Brca1
  • Brcc3
  • Brcc36
  • Bre
  • Brip1
  • Ccdc98
  • Chek1
  • Chk1
  • Ctip
  • Dna2
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Exo1
  • Fam175a
  • H2afx
  • H2ax
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Herc2
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist4
  • Hist4h4
  • Htatip
  • Hus1
  • Kat5
  • LOC100365043
  • LOC100910200
  • LOC684797
  • Mdc1
  • Merit40
  • Mms2
  • Mre11
  • Mre11a
  • Nba1
  • Nbn
  • Nbs1
  • Nsd2
  • P53
  • Pias4
  • RGD1564788
  • Rad1
  • Rad17
  • Rad50
  • Rad9a
  • Rad9b
  • Rap80
  • Rbbp8
  • Rfc2
  • Rfc3
  • Rfc4
  • Rfc5
  • Rhno1
  • Rmi1
  • Rmi2
  • Rnf168
  • Rnf8
  • Rpa1
  • Rpa2
  • Rpa3
  • Th2b
  • Tip60
  • Tip60b
  • Top3a
  • Topbp1
  • Tp53
  • Tp53bp1
  • Ube2v2
  • Uev2
  • Uimc1
  • Whsc1
  • Wrn
Rattus norvegicus (Norway rat)
Nitric oxide stimulates guanylate cyclase
  • Bnos
  • Nos1
  • Nos2
  • Nos3
Rattus norvegicus (Norway rat)
Inositol transporters
  • Kst1
  • Slc2a13
  • Slc5a11
  • Slc5a3
  • Smit2
Rattus norvegicus (Norway rat)
Metabolism of polyamines
  • Amd1
  • Odc
  • Odc1
  • Sms
  • Sms-ps2
  • Srm
Rattus norvegicus (Norway rat)
Attenuation phase
  • Cbp
  • Crebbp
  • Dnajb1
  • Ep300
  • Fkbp4
  • Fkbp52
  • Hsbp1
  • Hsc70
  • Hsc73
  • Hsf1
  • Hsp70-1
  • Hsp70-2
  • Hsp70-3
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspa1
  • Hspa1a
  • Hspa1b
  • Hspa1l
  • Hspa2
  • Hspa8
  • Hspc3
  • Hspca
  • Hspcb
  • Hst70
  • Ptges3
  • Tebp
Rattus norvegicus (Norway rat)
Factors involved in megakaryocyte development and platelet production
  • Ak3
  • Ak3l1
  • Akap
  • Akap1
  • Akap10
  • Akl3l
  • Aps
  • Capza1
  • Capza2
  • Capzb
  • Carmil1
  • Cbx5
  • Cdc42
  • Dock10
  • Dock11
  • Dock2
  • Dock3
  • Dock4
  • Dock5
  • Dock6
  • Dock7
  • Dock8
  • Ehd1
  • Ehd2
  • Ehd3
  • Fzo1a
  • Fzo1b
  • Gata1
  • Gata2
  • Gata4
  • Gata6
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • Hdac1
  • Hdac2
  • Hist2h3c2
  • Hmg20b
  • Itpk1
  • Jak2
  • Jmjd1c
  • Kdm1a
  • Maff
  • Mafg
  • Mfn1
  • Mfn2
  • Nfe2
  • Phf21a
  • Pkacb
  • Prkaca
  • Prkacb
  • Prkar1a
  • Prkar1b
  • Prkar2a
  • Prkar2b
  • Rab5a
  • Rac
  • Rac1
  • Rad51b
  • Rad51c
  • Rbsn
  • Rcor1
  • Sh2-b
  • Sh2b1
  • Sh2b2
  • Sh2bpsm1
  • Vps45
  • Vps45a
  • Zfpm1
  • Zfpm2
  • Zfyve20
Rattus norvegicus (Norway rat)
Extrinsic Pathway of Fibrin Clot Formation
  • Cf3
  • Cf9
  • F10
  • F3
  • F7
  • F9
  • Tfpi
Rattus norvegicus (Norway rat)
VLDL clearance
  • Apob
  • Apobr
  • Apoc1
  • Apoc4
  • Ecl
  • Vldlr
Rattus norvegicus (Norway rat)

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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