GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 1070 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
Malate-aspartate shuttle
  • Gc1
  • Got1
  • Got2
  • Maat
  • Mdh
  • Mdh1
  • Mdh2
  • Mor1
  • Slc20a4
  • Slc25a11
  • Slc25a12
  • Slc25a13
  • Slc25a18
  • Slc25a22
Rattus norvegicus (Norway rat)
Organic anion transporters
  • Bnpi
  • Dnpi
  • Gc1
  • Nis
  • Npt1
  • Slc17a1
  • Slc17a6
  • Slc17a7
  • Slc17a8
  • Slc20a3
  • Slc20a4
  • Slc25a1
  • Slc25a10
  • Slc25a11
  • Slc25a18
  • Slc25a22
  • Slc5a5
  • Slc5a8
  • Vglut1
  • Vglut2
  • Vglut3
Rattus norvegicus (Norway rat)
Sperm Motility And Taxes
  • Catsper1
  • Catsper2
  • Catsper3
  • Catsper4
  • Catsperb
  • Catsperd
  • Catsperg
  • Catsperg1
  • Hvcn1
  • Kcnu1
  • Tmem146
Rattus norvegicus (Norway rat)
Signaling by BMP
  • Actrii
  • Actriib
  • Acvr2
  • Acvr2a
  • Acvr2b
  • Acvrl1
  • Acvrlk1
  • Amh
  • Amhr2
  • Bmp-2
  • Bmp10
  • Bmp2
  • Bmpr1a
  • Bmpr1b
  • Bmpr2
  • Chrdl1
  • Frp
  • Fstl1
  • Gdf2
  • Grem2
  • Inha
  • Inhba
  • Kjr
  • Mad1
  • Madh1
  • Madh4
  • Madh5
  • Madh7
  • Madh8
  • Madh9
  • Ng1
  • Ski
  • Smad1
  • Smad4
  • Smad5
  • Smad6
  • Smad7
  • Smad8
  • Smad9
  • Smurf1
  • Smurf2
  • Tgfbr3
  • Ube2d1
  • Ube2d3
  • Zfyve16
Rattus norvegicus (Norway rat)
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
  • Arha
  • Arha2
  • Cgn
  • F11r
  • Jam1
  • LOC100360645
  • Par-6a
  • Par3
  • Par6a
  • Pard3
  • Pard6a
  • Pkcz
  • Prkcz
  • Rhoa
  • Rps27a
  • Smurf1
  • Tgfb1
  • Tgfbr1
  • Tgfbr2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
O-linked glycosylation
  • Ago61
  • B3galnt2
  • Dag1
  • Gtdc2
  • Gyltl1b
  • Large1
  • Large2
  • Pomgnt1
  • Pomgnt2
  • Pomk
  • Pomt1
  • Pomt2
  • Sgk196
Rattus norvegicus (Norway rat)
Apoptosis induced DNA fragmentation
  • Cad
  • Casp3
  • Cpp32
  • Dffa
  • Dffb
  • H1-0
  • H1-1
  • H1-4
  • H1-5
  • H1f0
  • H1f2
  • H1f4
  • H1f5
  • HIf5
  • Hist1h1a
  • Hist1h1b
  • Hmg-1
  • Hmg1
  • Hmg2
  • Hmgb1
  • Hmgb1-ps33
  • Hmgb1-ps4
  • Hmgb1l1
  • Hmgb1l2
  • Hmgb1l3
  • Hmgb1l5
  • Hmgb2
  • Kpna1
  • Kpnb1
  • LOC108349189
  • LOC108350839
Rattus norvegicus (Norway rat)
Mitochondrial protein import
  • Atp5b
  • Atp5f1b
  • Atp5g3
  • Atp5mc3
  • Coq2
  • Fxn
  • Hscb
  • Hsp60
  • Hspd1
  • Ldhd
  • Ndufb8
  • Otc
  • Pitrm1
Rattus norvegicus (Norway rat)
Transcriptional activation of mitochondrial biogenesis
  • AC128290.1
  • Acss2
  • Cycs
  • Cycsl2
  • Cycsl3
  • Gabpa
  • Gabpb1
  • Glud
  • Glud1
  • Idh2
  • LOC690675
  • RGD1562558
  • SIRT4
  • Sirt3
  • Sirt4
  • Sirt5
  • Sod2
Rattus norvegicus (Norway rat)
Regulation of pyruvate dehydrogenase (PDH) complex
  • Dlat
  • Dld
  • Gstz1
  • LOC311254
  • Pdh
  • Pdha1
  • Pdha1l1
  • Pdha2
  • Pdhb
  • Pdhx
  • Pdk1
  • Pdk2
  • Pdk4
  • Pdp1
  • Pdp2
  • Pdpr
  • Ppm2c
  • SIRT4
  • Sirt4
Rattus norvegicus (Norway rat)
RHO GTPases Activate WASPs and WAVEs
  • Abi1
  • Abi2
  • Abl1
  • Actb
  • Actg
  • Actg1
  • Actr2
  • Actr3
  • Arp2
  • Arp3
  • Arpc1a
  • Arpc1b
  • Arpc2
  • Arpc3
  • Arpc4
  • Arpc5
  • Ash
  • Baiap2
  • Brk1
  • Btk
  • Cdc42
  • Cr16
  • Cyfip1
  • Cyfip2
  • Erk1
  • Erk2
  • Fak
  • Fak1
  • Grb2
  • Hem2
  • Mapk
  • Mapk1
  • Mapk3
  • Nap1
  • Nck1
  • Nckap1
  • Nckap1l
  • Nckipsd
  • Prkm1
  • Prkm3
  • Ptk2
  • Rac
  • Rac1
  • Wasf1
  • Wasf2
  • Wasf3
  • Waspip
  • Wave1
  • Wip
  • Wipf1
  • Wipf3
Rattus norvegicus (Norway rat)
TRAF6 mediated NF-kB activation
  • A4
  • AD1
  • Ager
  • App
  • Chuk
  • Hmg-1
  • Hmg1
  • Hmgb1
  • Hmgb1-ps33
  • Hmgb1-ps4
  • Hmgb1l1
  • Hmgb1l2
  • Hmgb1l3
  • Hmgb1l5
  • Ikba
  • Ikbb
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC108349189
  • LOC108350839
  • Nemo
  • Nfkb2
  • Nfkbia
  • Nfkbib
  • Nkiras1
  • Nkiras2
  • Rage
  • Rela
  • S100b
Rattus norvegicus (Norway rat)
TAK1-dependent IKK and NF-kappa-B activation
  • A4
  • AD1
  • Ager
  • App
  • Chuk
  • Hmg-1
  • Hmg1
  • Hmgb1
  • Hmgb1-ps33
  • Hmgb1-ps4
  • Hmgb1l1
  • Hmgb1l2
  • Hmgb1l3
  • Hmgb1l5
  • Ikba
  • Ikbb
  • Ikbkb
  • Ikbkg
  • Ikkb
  • LOC108349189
  • LOC108350839
  • Nemo
  • Nfkb2
  • Nfkbia
  • Nfkbib
  • Nkiras1
  • Nkiras2
  • Rage
  • Rela
  • S100b
Rattus norvegicus (Norway rat)
Advanced glycosylation endproduct receptor signaling
  • A4
  • AD1
  • Ager
  • App
  • Capza1
  • Capza2
  • Hmg-1
  • Hmg1
  • Hmgb1
  • Hmgb1-ps33
  • Hmgb1-ps4
  • Hmgb1l1
  • Hmgb1l2
  • Hmgb1l3
  • Hmgb1l5
  • LOC108349189
  • LOC108350839
  • Rage
  • S100b
Rattus norvegicus (Norway rat)
NCAM1 interactions
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • LOC100911572
  • Ncam
  • Ncam1
  • Siat8b
  • St8sia2
  • St8sia4
  • Stx
Rattus norvegicus (Norway rat)
VLDL clearance
  • Apob
  • Apobr
  • Apoc1
  • Apoc4
  • Ecl
  • Vldlr
Rattus norvegicus (Norway rat)
RND1 GTPase cycle
  • Aldh3a2
  • Aldh4
  • Ankrd26
  • Arhgap35
  • Arhgap5
  • Arms
  • Cav
  • Cav1
  • Ccdc88a
  • Cpd
  • Depdc1b
  • Dlg5
  • Dsp
  • Dst
  • Epha2
  • Epsti1
  • Fam135a
  • Fam83b
  • Flot2
  • Frs2
  • Frs3
  • Grb7
  • Grlf1
  • Hop
  • Kidins220
  • Kif14
  • Muc13
  • P190A
  • Pik3r1
  • Pik3r2
  • Pkp4
  • Plekhg5
  • Plxna1
  • Ptpn13
  • RGD1310313
  • Rasal2
  • Rbm39
  • Rbmx
  • Rbmxrt
  • Reg1
  • Rnd1
  • Rras2
  • Scg10
  • Scgn10
  • Snt2
  • Soc
  • Stip1
  • Stmn2
  • Tech
  • Tfrc
  • Tmem59
  • Trfr
  • Trp
  • Txnl1
  • Ubxd5
  • Ubxn11
  • Vangl1
  • Vangl2
  • Wdr6
  • p190ARHOGAP
Rattus norvegicus (Norway rat)
RND3 GTPase cycle
  • Ankrd26
  • Arhe
  • Arhgap21
  • Arhgap35
  • Arhgap5
  • Calm
  • Cav
  • Cav1
  • Ccdc88a
  • Ckap4
  • Ckb
  • Ckbb
  • Cpd
  • Depdc1b
  • Dlg5
  • Dsg1
  • Dsp
  • Dst
  • Epha2
  • Fam83b
  • Flot2
  • Grlf1
  • Ktn1
  • Muc13
  • Nisch
  • P190A
  • Picalm
  • Pik3r1
  • Pik3r2
  • Pkp4
  • Plekhg5
  • Ptpn13
  • Rasal2
  • Rbm39
  • Rbmx
  • Rbmxrt
  • Reg1
  • Rhoe
  • Rnd3
  • Rock1
  • Scrib
  • Sema4f
  • Soc
  • Tech
  • Tmod3
  • Tnfaip1
  • Trp
  • Txnl1
  • Ubxd5
  • Ubxn11
  • Vangl1
  • Vangl2
  • Wdr6
  • p190ARHOGAP
Rattus norvegicus (Norway rat)
RUNX3 regulates NOTCH signaling
  • Cbp
  • Crebbp
  • Ep300
  • Kat2a
  • Kat2b
  • Maml1
  • Maml2
  • Maml3
  • Rbpj
  • Runx3
  • Snw1
Rattus norvegicus (Norway rat)
RUNX3 regulates WNT signaling
  • Catnb
  • Ctnnb1
  • Lef1
  • Runx3
  • Tcf7
  • Tcf7l1
  • Tcf7l2
Rattus norvegicus (Norway rat)
RUNX3 regulates p14-ARF
  • Cbfb
  • Ccnd1
  • Ep300
  • Hdac4
  • Runx3
  • Tgfb1
Rattus norvegicus (Norway rat)
RUNX3 regulates CDKN1A transcription
  • Madh3
  • Madh4
  • P53
  • Runx3
  • Smad3
  • Smad4
  • Tgfb1
  • Tp53
  • Zfhx3
Rattus norvegicus (Norway rat)
Sema4D induced cell migration and growth-cone collapse
  • Arha
  • Arha2
  • Arhb
  • Arhgef11
  • Arhgef12
  • Erbb2
  • Neu
  • Plxnb1
  • Rhoa
  • Rhob
  • Rnd1
  • Rock1
  • Rock2
  • Sema4d
Rattus norvegicus (Norway rat)
Golgi Associated Vesicle Biogenesis
  • AABR07054189.1
  • Acbd3
  • Adtb1
  • Ap1b1
  • Ap1g1
  • Ap1m1
  • Ap1m2
  • Ap1s1
  • Ap1s2
  • Ap1s3
  • Ap3b1
  • Ap3s1
  • Ap4b1
  • Ap4e1
  • Arf1
  • Arrb1
  • Bloc1s1
  • Bloc1s3
  • Bloc1s4
  • Bloc1s6
  • Bloc1s7
  • Bloc1s8
  • Calm
  • Clint1
  • Clta
  • Cltc
  • Cpd
  • Dnajc6
  • Dnm2
  • Dtnbp1
  • Dyn2
  • Fth
  • Fth1
  • Fth1-ps5
  • Ftl
  • Ftl1
  • Ftl1l2
  • Gak
  • Gcp60
  • Golgb1
  • Hip1r
  • Hsc70
  • Hsc73
  • Hspa8
  • Igf2r
  • LOC100359668
  • Napa
  • Necap1
  • Ocrl
  • Picalm
  • Pik3c2a
  • Pldn
  • Pum1
  • Rab5c
  • Sh3d19
  • Sh3d2a
  • Sh3gl2
  • Sh3p4
  • Snap
  • Snap25bp
  • Snapa
  • Snapap
  • Snapin
  • Snx2
  • Snx5
  • Snx9
  • Sort1
  • Syb2
  • Sybl1
  • Tbc1d8b
  • Tfrc
  • Tpd52
  • Tpd52l1
  • Trfr
  • Ttgn1
  • Txndc5
  • Vamp2
  • Vamp7
  • Vamp8
  • Yipf6
Rattus norvegicus (Norway rat)
Insertion of tail-anchored proteins into the endoplasmic reticulum membrane
  • A4
  • AD1
  • Aldh3a2
  • Aldh4
  • App
  • Cyb5
  • Cyb5a
  • Emd
  • Hmox1
  • Prn
  • Prnp
  • Prp
  • Ramp4
  • Sap
  • Sec61b
  • Sec61g
  • Serp1
  • Sgt
  • Sgt1
  • Sgta
  • Stg
  • Stx1a
  • Stx5
  • Stx5a
  • Syb2
  • Ube2j2
  • Vamp2
  • Vap33
  • Vapa
Rattus norvegicus (Norway rat)

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Last updated: August 19, 2024