GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 601 - 625 of 1070 in total
Pathway Name Protein Name UniProt ID ▼ Gene Symbol Organism GlyTouCan ID
Signaling by ERBB2
  • Btc
  • Cdc37
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Fyn
  • Hbegf
  • Hegfl
  • Hsp86
  • Hsp90aa1
  • Hspca
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
SHC1 events in ERBB4 signaling
  • Ash
  • Btc
  • Dtr
  • Ereg
  • Grb2
  • Hbegf
  • Hegfl
  • Hras
  • Hras1
  • Kras
  • Kras2
  • Ndf
  • Nras
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Shc1
  • Sos1
Rattus norvegicus (Norway rat)
GRB2 events in ERBB2 signaling
  • Ash
  • Btc
  • Dtr
  • Erbb2
  • Ereg
  • Grb2
  • Hbegf
  • Hegfl
  • Hras
  • Hras1
  • Kras
  • Kras2
  • Ndf
  • Neu
  • Nras
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Sos1
Rattus norvegicus (Norway rat)
ERBB2 Activates PTK6 Signaling
  • Btc
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Ptk6
Rattus norvegicus (Norway rat)
Downregulation of ERBB2 signaling
  • Batk
  • Btc
  • Cdc37
  • Ctk
  • Cul5
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Hsp86
  • Hsp90aa1
  • Hspca
  • LOC100360645
  • Matk
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Ptpn12
  • Ptpn18
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vacm1
Rattus norvegicus (Norway rat)
L1CAM interactions
  • Caml1
  • Gap43
  • L1cam
  • Lypla2
  • Ranbp9
Rattus norvegicus (Norway rat)
MET activates RAS signaling
  • Ash
  • Grb2
  • Hgf
  • Hras
  • Hras1
  • Kras
  • Kras2
  • Met
  • Muc20
  • Nras
  • Ranbp10
  • Ranbp9
  • Shc1
  • Sos1
Rattus norvegicus (Norway rat)
Keratan sulfate degradation
  • Acan
  • Agc
  • Agc1
  • Fmod
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gns
  • Hexa
  • Hexb
  • Kera
  • Lcn
  • Ldc
  • Lum
  • Omd
  • Prelp
Rattus norvegicus (Norway rat)
HS-GAG degradation
  • Agrin
  • Agrn
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Gus
  • Gusb
  • Hep
  • Hpse
  • Hpse2
  • Hspg1
  • Ids
  • Idua
  • LOC100363795
  • Naglu
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Sgsh
  • Synd1
  • Synd2
  • Synd3
  • Synd4
Rattus norvegicus (Norway rat)
RAF activation
  • A-raf
  • Araf
  • Araf1
  • Braf
  • Brap
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Hras
  • Hras1
  • Jak2
  • Kras
  • Kras2
  • Ksr1
  • LOC100909468
  • Map2k1
  • Map2k2
  • Map3k11
  • Mark3
  • Mek1
  • Mek2
  • Mkk2
  • Mlk3
  • Mras
  • Nras
  • Phb
  • Phb1
  • Ppp1cb
  • Ppp1cc
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5a
  • Ppp2r5b
  • Ppp2r5c
  • Ppp2r5d
  • Ppp2r5e
  • Prkmk1
  • Prkmk2
  • Raf
  • Raf1
  • Rras3
  • Shoc2
  • Src
  • Ywhab
Rattus norvegicus (Norway rat)
Negative regulation of MAPK pathway
  • A-raf
  • Araf
  • Araf1
  • Braf
  • Brap
  • Cl100
  • Dusp1
  • Dusp10
  • Dusp16
  • Dusp4
  • Dusp5
  • Dusp6
  • Dusp7
  • Dusp8
  • Dusp9
  • ENSRNOG00000069024
  • Erk1
  • Erk2
  • Hras
  • Hras1
  • Kras
  • Kras2
  • Ksr1
  • LOC100360645
  • LOC100909468
  • Lcptp
  • Mapk
  • Mapk1
  • Mapk12
  • Mapk3
  • Mark3
  • Mkp1
  • Mkp2
  • Mkp3
  • Mkpx
  • Nras
  • Pbp
  • Pebp
  • Pebp1
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5a
  • Ppp2r5b
  • Ppp2r5c
  • Ppp2r5d
  • Ppp2r5e
  • Ppp5c
  • Prkm1
  • Prkm3
  • Ptpn16
  • Ptpn3
  • Ptpn7
  • Raf
  • Raf1
  • Rps27a
  • Sapk3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ywhab
Rattus norvegicus (Norway rat)
Metabolism of folate and pterines
  • Aldh1l1
  • Aldh1l2
  • Dhfr
  • Folr2
  • Fpgs
  • Fthfd
  • Hcp1
  • Mthfd
  • Mthfd1
  • Mthfd1l
  • Mthfd2
  • Mthfd2l
  • Mthfr
  • Mthfs
  • Pcft
  • Shmt1
  • Shmt2
  • Slc19a1
  • Slc25a32
  • Slc46a1
Rattus norvegicus (Norway rat)
Downregulation of TGF-beta receptor signaling
  • Bambi
  • LOC100360645
  • Madh2
  • Madh3
  • Madh7
  • Mtmr4
  • Pmepa1
  • Rps27a
  • Smad2
  • Smad3
  • Smad7
  • Smurf2
  • Strap
  • Tgfb1
  • Tgfbr1
  • Tgfbr2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Unrip
Rattus norvegicus (Norway rat)
Maturation of TCA enzymes and regulation of TCA cycle
  • Acat1
  • Aco2
  • Fxn
  • Idh2
  • Pgl2
  • Sdh5
  • Sdha
  • Sdhaf2
  • Sirt3
Rattus norvegicus (Norway rat)
Opsins
  • Bcp
  • Gcp
  • Opn1mw
  • Opn1sw
  • Opn3
  • Opn4
  • Opn5
  • Rgr
  • Rho
  • Rrh
Rattus norvegicus (Norway rat)
LGI-ADAM interactions
  • Adam11
  • Adam22
  • Adam23
  • Cacng2
  • Cacng3
  • Cacng4
  • Cacng8
  • Dlg4
  • Dlgh4
  • Lgi1
  • Lgi2
  • Lgi3
  • Lgi4
  • Psd95
  • Sap
  • Stg
  • Stx1a
  • Stx1b
  • Stx1b2
Rattus norvegicus (Norway rat)
The activation of arylsulfatases
  • AABR07013255.1
  • Arsa
  • Arsb
  • Arse
  • Arsg
  • Arsi
  • Arsj
  • Arsk
  • Arsl
  • Sts
  • Sumf1
  • Sumf2
Rattus norvegicus (Norway rat)
Multifunctional anion exchangers
  • Dra
  • Dtdst
  • Pds
  • Sat1
  • Slc26a1
  • Slc26a11
  • Slc26a2
  • Slc26a3
  • Slc26a4
  • Slc26a6
  • Slc26a7
  • Slc26a9
  • Slc5a12
Rattus norvegicus (Norway rat)
BBSome-mediated cargo-targeting to cilium
  • Arl6
  • Bbs1
  • Bbs2
  • Bbs4
  • Bbs7
  • Bbs9
  • Gpr24
  • Lztfl1
  • Mchr1
  • Rab3ip
  • Rabin3
  • Rabin8
  • Slc1
  • Smo
  • Smoh
  • Sstr3
  • Ttc8
Rattus norvegicus (Norway rat)
PINK1-PRKN Mediated Mitophagy
  • Apg12l
  • Atg12
  • Atg5
  • Fzo1a
  • Fzo1b
  • LOC100360645
  • Map1alc3
  • Map1lc3
  • Map1lc3a
  • Map1lc3b
  • Mfn1
  • Mfn2
  • Mterf3
  • Mterfd1
  • Park2
  • Pink1
  • Prkn
  • Rps27a
  • Sqstm1
  • Tom22
  • Tom40
  • Tom40a
  • Tomm20
  • Tomm22
  • Tomm40
  • Tomm5
  • Tomm7
  • Tomm70
  • Tomm70a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vdac1
  • Zip
Rattus norvegicus (Norway rat)
Acetylcholine Neurotransmitter Release Cycle
  • Bzrap1
  • Chat
  • Cht1
  • Cplx1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a3
  • Slc5a7
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Syb2
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vacht
  • Vamp2
  • Vat
Rattus norvegicus (Norway rat)
Norepinephrine Neurotransmitter Release Cycle
  • Bzrap1
  • Cplx1
  • Maoa
  • Oct1
  • Oct2
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a2
  • Slc22a1
  • Slc22a2
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Svat
  • Syb2
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Vmat2
Rattus norvegicus (Norway rat)
Serotonin Neurotransmitter Release Cycle
  • Bzrap1
  • Cplx1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a2
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Svat
  • Syb2
  • Syn1
  • Syn2
  • Syn3
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Vmat2
Rattus norvegicus (Norway rat)
Dopamine Neurotransmitter Release Cycle
  • Apba1
  • Bzrap1
  • Cask
  • Cplx1
  • Lin7a
  • Lin7b
  • Lin7c
  • Mals1
  • Mals2
  • Mals3
  • Mint1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a2
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Svat
  • Syb2
  • Syn1
  • Syn2
  • Syn3
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Veli1
  • Veli1a
  • Veli2
  • Veli3
  • Vmat2
  • X11
Rattus norvegicus (Norway rat)
Glutamate Neurotransmitter Release Cycle
  • Arl6ip5
  • Ata2
  • Bnpi
  • Bzrap1
  • Cplx1
  • Eaac1
  • Eaat1
  • Eaat2
  • Eaat3
  • Eaat4
  • Ga
  • Gls
  • Gls2
  • Glt1
  • Gtrap3-18
  • Jwa
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Pra2
  • Praf3
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sa1
  • Sap
  • Sat2
  • Slc17a7
  • Slc1a1
  • Slc1a2
  • Slc1a3
  • Slc1a6
  • Slc1a7
  • Slc38a2
  • Snap
  • Snap25
  • Snat2
  • Stx1a
  • Stxbp1
  • Syb2
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vamp2
  • Vglut1
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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