GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 676 - 700 of 1070 in total
Pathway Name Protein Name ▲ UniProt ID Gene Symbol Organism GlyTouCan ID
Other semaphorin interactions
  • Cd72
  • Dap12
  • Plxna1
  • Plxnb3
  • Plxnc1
  • Plxnd1
  • Ptprc
  • Sema3e
  • Sema4a
  • Sema4d
  • Sema5a
  • Sema6d
  • Sema7a
  • Trem2
  • Tyrobp
Rattus norvegicus (Norway rat)
Nectin/Necl trans heterodimerization
  • Cadm1
  • Cadm3
  • Igsf4b
  • Necl1
  • Nectin1
  • Nectin2
  • Nectin3
  • Nectin4
  • Pvrl1
  • Pvrl2
  • SynCam1
Rattus norvegicus (Norway rat)
DSCAM interactions
  • Dscam
  • Dscaml1
Rattus norvegicus (Norway rat)
Ligand-receptor interactions
  • Cdo
  • Cdon
  • Dhh
  • Hhip
  • Ihh
  • Ptch
  • Ptch1
  • Shh
  • Vhh-1
Rattus norvegicus (Norway rat)
DCC mediated attractive signaling
  • Cdc42
  • Dcc
  • Fak
  • Fak1
  • Fyn
  • Nck1
  • Ptk2
  • Rac
  • Rac1
  • Src
  • Trio
Rattus norvegicus (Norway rat)
G beta:gamma signalling through CDC42
  • Arhgef6
  • Cdc42
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Pak1
Rattus norvegicus (Norway rat)
Synthesis of active ubiquitin: roles of E1 and E2 enzymes
  • AABR07041109.1
  • Cdc34
  • Fam105b
  • Hausp
  • LOC100360645
  • LOC100362554
  • LOC100366017
  • LOC64038
  • NEWGENE_1308361
  • Otulin
  • Rad6b
  • Rps27a
  • Uba1
  • Uba6
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubc4
  • Ubc7
  • Ubcep1
  • Ubch4
  • Ubch5b
  • Ubcl1
  • Ube1
  • Ube2a
  • Ube2b
  • Ube2c
  • Ube2d1
  • Ube2d2
  • Ube2e1
  • Ube2e3
  • Ube2g
  • Ube2g1
  • Ube2g2
  • Ube2h
  • Ube2k
  • Ube2l3
  • Ube2q2
  • Ube2r2
  • Ube2s
  • Ube2t
  • Ube2w
  • Ube2z
  • Uchl3
  • Usp5
  • Usp7
Rattus norvegicus (Norway rat)
Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components
  • Cdc20
  • Mad2l1
Rattus norvegicus (Norway rat)
Oxidative Stress Induced Senescence
  • Cbx2
  • Cbx4
  • Cbx6
  • Cbx8
  • Cdk4
  • Cdk6
  • Cdkn2b
  • Cdkn2d
  • Csbp1
  • Csbp2
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Eed
  • Erk1
  • Erk2
  • Ezh2
  • Fos
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3-3b
  • H3.3b
  • H3c13
  • H3f3b
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Ink4
  • Jnk1
  • Jnk2
  • Jnk3
  • Jun
  • Kdm6b
  • LOC100360645
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC684797
  • Map2k3
  • Map2k4
  • Map2k6
  • Map2k7
  • Map3k5
  • Map4k4
  • Map4k6
  • Mapk
  • Mapk1
  • Mapk10
  • Mapk11
  • Mapk14
  • Mapk3
  • Mapk8
  • Mapk9
  • Mapkapk2
  • Mapkapk3
  • Mapkapk5
  • Mdm2
  • Mdm4
  • Mdmx
  • Mink
  • Mink1
  • Mkk6
  • P53
  • Phc1
  • Phc2
  • Phc3
  • Prkm1
  • Prkm10
  • Prkm3
  • Prkm8
  • Prkm9
  • Rbbp4
  • Rbbp7
  • Ring1
  • Ring1b
  • Rjg-9
  • Rnf1
  • Rnf2
  • Rps27a
  • Scml2
  • Suz12
  • Th2b
  • Tnik
  • Tp53
  • Txn
  • Txn1
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Oncogene Induced Senescence
  • Cdk4
  • Cdk6
  • Cdkn2b
  • Cdkn2d
  • Erf
  • Erk1
  • Erk2
  • Ets-1
  • Ets1
  • Ets2
  • Id-1
  • Id1
  • Ink4
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Mdm2
  • Mdm4
  • Mdmx
  • P53
  • Prkm1
  • Prkm3
  • Rps27a
  • Tp53
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Stabilization of p53
  • Atm
  • LOC100360645
  • Mdm2
  • Mdm4
  • Mdmx
  • P53
  • Phf20
  • Rps27a
  • Tp53
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
RUNX3 regulates CDKN1A transcription
  • Madh3
  • Madh4
  • P53
  • Runx3
  • Smad3
  • Smad4
  • Tgfb1
  • Tp53
  • Zfhx3
Rattus norvegicus (Norway rat)
Regulation of TP53 Activity through Association with Co-factors
  • Akt1
  • Akt2
  • Akt3
  • Brn-3
  • Brn3
  • Brn3a
  • Brn3b
  • Ket
  • P53
  • P63
  • Phf20
  • Pou4f1
  • Pou4f2
  • Ppp1r13b
  • Ppp1r13l
  • Tp53
  • Tp53bp2
  • Tp63
  • Tp73
  • Tp73l
  • Trp63
  • Zfp385a
Rattus norvegicus (Norway rat)
Deposition of new CENPA-containing nucleosomes at the centromere
  • Cenpc
  • Cenpc1
  • Cenph
  • Cenpi
  • Cenpk
  • Cenpl
  • Cenpm
  • Cenpn
  • Cenpo
  • Cenpp
  • Cenpq
  • Cenpr
  • Cenpt
  • Cenpu
  • Cenpw
  • Cug2
  • ENSRNOG00000062927
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • Fshprh1
  • H2ab3
  • H2ac10
  • H2ac18
  • H2ac4
  • H2afb3
  • H2afx
  • H2aj
  • H2ax
  • H2az2
  • H2bc1
  • H2bc12l1
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h2aa3
  • Hist4
  • Hist4h4
  • Hjurp
  • Itgb3bp
  • Knl1
  • LOC100365043
  • LOC100910200
  • LOC120097726
  • LOC679342
  • LOC681185
  • LOC684797
  • Lrpr1
  • Mis18a
  • Mis18bp1
  • Mlf1ip
  • Npm1
  • Nrif3
  • Oip5
  • Rbbp4
  • Rbbp7
  • Rsf1
  • Ruvbl1
  • Smarca5
  • Th2b
  • Tip49
  • Tip49a
Rattus norvegicus (Norway rat)
Metal ion SLC transporters
  • Bcg
  • Copt1
  • Cp
  • Ctr1
  • Dct1
  • Dmt1
  • Fpn1
  • Fpt1
  • Heph
  • Nramp1
  • Nramp2
  • Slc11a1
  • Slc11a2
  • Slc30a10
  • Slc31a1
  • Slc40a1
  • Slc41a1
  • Slc41a2
Rattus norvegicus (Norway rat)
Association of TriC/CCT with target proteins during biosynthesis
  • Cct1
  • Cct2
  • Cct3
  • Cct4
  • Cct5
  • Cct6a
  • Cct6b
  • Cct7
  • Cct8
  • Ccta
  • Cctb
  • LOC363658
  • Sphk1
  • Tcp1
Rattus norvegicus (Norway rat)
Endosomal Sorting Complex Required For Transport (ESCRT)
  • Chmp2a
  • Chmp2b
  • Chmp3
  • Chmp4b
  • Chmp4c
  • Chmp5
  • Chmp6
  • Chmp7
  • Eap20
  • Eap30
  • Eap45
  • Fam125a
  • Hgs
  • Hrs
  • Hrs2
  • LOC100360645
  • Mvb12a
  • Mvb12b
  • NEWGENE_1309258
  • Rps27a
  • Snf8
  • Stam
  • Stam2
  • Tsg101
  • Uba80
  • Ubap1
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vps24
  • Vps25
  • Vps28
  • Vps36
  • Vps37b
  • Vps37c
  • Vps37d
  • Vps4a
  • Vps4b
  • Vta1
  • vps4-A
Rattus norvegicus (Norway rat)
Sealing of the nuclear envelope (NE) by ESCRT-III
  • Cc2d1b
  • Chmp2a
  • Chmp2b
  • Chmp3
  • Chmp4b
  • Chmp4c
  • Chmp6
  • Chmp7
  • Ist1
  • LOC679312
  • Spast
  • Spg4
  • Tuba1
  • Tuba1a
  • Tuba1b
  • Tuba1c
  • Tuba2
  • Tuba3
  • Tuba3a
  • Tuba3b
  • Tuba4
  • Tuba4a
  • Tuba6
  • Tuba8
  • Tubal3
  • Tubb1
  • Tubb2a
  • Tubb2b
  • Tubb2c
  • Tubb3
  • Tubb4b
  • Vps24
  • Vps4a
  • vps4-A
Rattus norvegicus (Norway rat)
Acetylcholine Neurotransmitter Release Cycle
  • Bzrap1
  • Chat
  • Cht1
  • Cplx1
  • Ppfia1
  • Ppfia2
  • Ppfia3
  • Ppfia4
  • Rab3a
  • Rbp1
  • Rim1
  • Rims1
  • Sap
  • Slc18a3
  • Slc5a7
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Syb2
  • Syt1
  • Tspoap1
  • Unc13b
  • Unc13h2
  • Unc18a
  • Vacht
  • Vamp2
  • Vat
Rattus norvegicus (Norway rat)
Synthesis of PE
  • Cept1
  • Chetk
  • Chk
  • Chka
  • Chkb
  • Chkl
  • Ckr
  • Ept1
  • Etnk1
  • Etnk2
  • Etnppl
  • LOC687071
  • Lpin1
  • Lpin2
  • Lpin3
  • Pcyt2
  • Phospho1
  • Selenoi
Rattus norvegicus (Norway rat)
Transport of bile salts and organic acids, metal ions and amine compounds
  • Cd92
  • Cdw92
  • Cht1
  • Ctl1
  • Ctl2
  • Ctl3
  • Ctl4
  • Mate1
  • Ng22
  • Slc10a6
  • Slc14a1
  • Slc14a2
  • Slc44a1
  • Slc44a2
  • Slc44a3
  • Slc44a4
  • Slc44a5
  • Slc47a1
  • Slc5a7
  • Soat
  • TPPT1
  • UT11
  • UT3
  • Ut2
Rattus norvegicus (Norway rat)
Na+/Cl- dependent neurotransmitter transporters
  • B0at1
  • B0at3
  • Cgat
  • Gabt1
  • Gabt2
  • Gabt3
  • Gat-1
  • Gat-2
  • Gat-3
  • Gat-b
  • Gat1
  • Glyt2
  • Ntt73
  • Oct1
  • Oct2
  • Prot
  • Sit1
  • Slc18a1
  • Slc18a2
  • Slc22a1
  • Slc22a2
  • Slc6a1
  • Slc6a11
  • Slc6a12
  • Slc6a13
  • Slc6a14
  • Slc6a15
  • Slc6a18
  • Slc6a19
  • Slc6a2
  • Slc6a20
  • Slc6a3
  • Slc6a5
  • Slc6a6
  • Slc6a7
  • Slc6a9
  • Svat
  • Vmat1
  • Vmat2
  • Xtrp2
  • Xtrp3
Rattus norvegicus (Norway rat)
Switching of origins to a post-replicative state
  • Cdt1
  • Gmnn
Rattus norvegicus (Norway rat)
Signaling by SCF-KIT
  • Ash
  • Chek1
  • Chk1
  • Cma1
  • Fer
  • Fert2
  • Fes
  • Flk
  • Fyn
  • Gab2
  • Grap
  • Grap2
  • Grb10
  • Grb2
  • Grb7
  • Hras
  • Hras1
  • Jak2
  • KIT
  • Kit
  • Kitl
  • Kitlg
  • Kras
  • Kras2
  • Lck
  • Lyn
  • Mcpt3
  • Mgf
  • Mmp9
  • Nras
  • Pik3ca
  • Pik3r1
  • Pik3r2
  • Pik3r3
  • Pkca
  • Prkca
  • Ptpn11
  • Ptpru
  • Rac
  • Rac1
  • Sos1
  • Src
  • Stat1
  • Stat3
  • Stat4
  • Stat5a
  • Stat5b
  • Tec
  • Vav
  • Vav1
  • Yes1
Rattus norvegicus (Norway rat)
TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)
  • Arha
  • Arha2
  • Cgn
  • F11r
  • Jam1
  • LOC100360645
  • Par-6a
  • Par3
  • Par6a
  • Pard3
  • Pard6a
  • Pkcz
  • Prkcz
  • Rhoa
  • Rps27a
  • Smurf1
  • Tgfb1
  • Tgfbr1
  • Tgfbr2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024