GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **751 - 775** of **1070** in total

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Pathway Name ▲	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
ROS and RNS production in phagocytes	ATPase H+ transporting V0 subunit B ATPase H+ transporting V0 subunit D1 ATPase H+ transporting V1 subunit E2 Cytochrome b-245 heavy chain Cytochrome b-245 light chain H(+)-transporting two-sector ATPase Natural resistance-associated macrophage protein 1 Neutrophil cytosol factor 2 Neutrophil cytosolic factor 1 Neutrophil cytosolic factor 4 Nitric oxide synthase 1 Nitric oxide synthase 3 Nitric oxide synthase, inducible Rac family small GTPase 2 V-type proton ATPase 116 kDa subunit a 1 V-type proton ATPase 16 kDa proteolipid subunit c V-type proton ATPase subunit B, brain isoform V-type proton ATPase subunit C 1 V-type proton ATPase subunit C 2 V-type proton ATPase subunit D V-type proton ATPase subunit E 1 V-type proton ATPase subunit F V-type proton ATPase subunit G V-type proton ATPase subunit G V-type proton ATPase subunit G V-type proton ATPase subunit H V-type proton ATPase subunit a V-type proton ATPase subunit a V-type proton ATPase subunit d 2 V-type proton ATPase subunit e 1 V-type proton ATPase subunit e 2 Vacuolar proton pump subunit B Voltage-gated hydrogen channel 1	A0A8I5ZND3 A0A8I5ZNF3 A0A8I5ZWI2 A0A8I6A1P8 A0A8I6B3N3 A0A8J8XD13 A7E3N2 D3ZIU8 D3ZJ78 D3ZTZ4 D3ZZS8 D4A133 D4A1H0 F1M707 F7FFW7 P25286 P29476 P50408 P62815 P63081 P70553 Q06518 Q5EB76 Q5FVI6 Q5FVL0 Q62600 Q62737 Q6AYE4 Q6P503 Q6PCU2 Q794C0 Q8R2H0 Q9ERL1	Aif1 Atp6b2 Atp6c Atp6l Atp6n1 Atp6s14 Atp6v0a1 Atp6v0a4 Atp6v0b Atp6v0c Atp6v0d1 Atp6v0d2 Atp6v0e Atp6v0e1 Atp6v0e2 Atp6v1a Atp6v1b1 Atp6v1b2 Atp6v1c1 Atp6v1c2 Atp6v1d Atp6v1e1 Atp6v1e2 Atp6v1f Atp6v1g1 Atp6v1g2 Atp6v1g3 Atp6v1h Atpl Bat1a Bcg Bnos Cdk2ap1-ps2 Cdk2ap1-ps3 Cdk2ap1-ps4 Cdk2ap1-ps5 Cdk2ap1-ps6 Cyba Cybb Dsr1 E230034O05Rik Hvcn1 LOC224733l-3 LOC224733l-4 LOC224733l-5 LOC224733l-6 LOC224733l-7 LOC224733l-8 Lst1 Ncf1 Ncf2 Ncf4 Nos1 Nos2 Nos3 Nramp1 RT1-CE12 RT1-CE3 RT1-CE5 RT1-CE6 RT1-CE8 RT1-CE9 Rac2 Sacm2l-ps3 Sacm2l-ps4 Sacm2l-ps5 Sacm2l-ps6 Sacm2l-ps7 Slc11a1 Tcirg1 Tnf Vat2 Vatf Vpp1	Rattus norvegicus (Norway rat)
RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs)	Core-binding factor subunit beta Forkhead box P3 Runt-related transcription factor 1	A0A8I6GMB2 D4Q8I2 Q63046	Aml1 Cbfa2 Cbfb Foxp3 Runx1	Rattus norvegicus (Norway rat)
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known	AT-rich interaction domain 1A AT-rich interaction domain 1B Actin-like 6A Actin-like protein 6B Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta Chromobox 2 Chromobox 4 Chromobox 6 Chromobox 8 Core-binding factor subunit beta E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING2 Polybromo 1 Polycomb group ring finger 5 Polyhomeotic homolog 1 Polyhomeotic homolog 2 Polyhomeotic homolog 3 RING1 and YY1 binding protein Runt-related transcription factor 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 Scm polycomb group protein like 2 Transcription activator BRG1 YY1 associated factor 2 histone acetyltransferase	A0A0G2JVD3 A0A0G2K2B0 A0A8I5Y785 A0A8I5ZMG5 A0A8I5ZMW9 A0A8I5ZQQ2 A0A8I6A5E1 A0A8I6ACN6 A0A8I6AHM8 A0A8I6AJE2 A0A8I6AMA8 A0A8I6ASY1 A0A8I6G641 A0A8I6GMB2 A0A8J8YH81 D3ZBS9 D3ZII7 D3ZRL8 D4A0M3 E9PTG1 F1M771 F7FH41 M0RE14 O54772 P19139 P67874 P86173 Q4KLY4 Q4KM87 Q56A18 Q63046 Q6MGB6 Q8K1P7	Actl6a Actl6b Aml1 Arid1a Arid1b Baf190a Baf57 Baf60b Brg1 Cbfa2 Cbfb Cbx2 Cbx4 Cbx6 Cbx8 Ck2n Csnk2a1 Csnk2a2 Csnk2b Ep300 LOC120102351 Pbrm1 Pcgf5 Phc1 Phc2 Phc3 Ring1 Ring1b Rnf1 Rnf2 Runx1 Rybp Scml2 Smarca2 Smarca4 Smarcb1 Smarcc1 Smarcc2 Smarcd1 Smarcd2 Smarcd3 Smarce1 Snf2b Snf2l4 Yaf2	Rattus norvegicus (Norway rat)
RUNX1 regulates estrogen receptor mediated transcription	Core-binding factor subunit beta Estrogen receptor Runt-related transcription factor 1	A0A8I6GMB2 P06211 Q63046	Aml1 Cbfa2 Cbfb Esr Esr1 Estr Nr3a1 Runx1	Rattus norvegicus (Norway rat)
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function	ASH2 like histone lysine methyltransferase complex subunit Core-binding factor subunit beta Erythroid transcription factor Histone H2A type 2-A Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H3.1 Histone H3.3 Histone H3 Histone H4 Histone acetyltransferase Histone deacetylase 1 Histone-lysine N-methyltransferase Protein arginine N-methyltransferase 1 RB binding protein 5, histone lysine methyltransferase complex subunit Runt-related transcription factor 1 SET domain containing 1A, histone lysine methyltransferase SET domain containing 1B, histone lysine methyltransferase SIN3 transcription regulator family member A SIN3 transcription regulator family member B WD repeat-containing protein 5 Zinc finger protein, multitype 1 [histone H3]-lysine(4) N-methyltransferase [histone H3]-lysine(4) N-methyltransferase histone acetyltransferase	A0A0G2JXI9 A0A0G2K1E3 A0A0G2K6T6 A0A8I5Y222 A0A8I5ZSA8 A0A8I5ZYY0 A0A8I6A2W1 A0A8I6A4Z1 A0A8I6A7P3 A0A8I6AFW8 A0A8I6ANV4 A0A8I6AWT3 A0A8I6G641 A0A8I6G659 A0A8I6G8L9 A0A8I6GMB2 A9UMV8 D3ZBP2 D3ZC01 D3ZJ08 D3ZTV7 D3ZVK7 D3ZXP3 D4A168 D4ACM0 F1M0L3 G3V9C7 M0RBQ5 P0CC09 P43429 P62804 P84245 Q00729 Q498M4 Q4QQW4 Q63009 Q63046 Q6LED0	Aml1 Ash2l Cbfa2 Cbfb ENSRNOG00000062927 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 Ep300 Gata1 H2ab3 H2ac10 H2ac18 H2ac4 H2afb3 H2afx H2aj H2ax H2az2 H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H3-3b H3.3b H3c13 H3f3b H4c16 H4c2 H4f16 H4ft Hdac1 Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist2h2aa3 Hist2h3c2 Hist4 Hist4h4 Hrmt1l2 Kat2b Kmt2a Kmt2b Kmt2c LOC100365043 LOC100910200 LOC120097726 LOC684797 Mll Mll1 Prmt1 Rbbp5 Runx1 Setd1a Setd1b Sin3a Sin3b Th2b Wdr5 Zfpm1	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in BCR signaling	Core-binding factor subunit beta Paired box 5 Runt-related transcription factor 1	A0A8I5ZL27 A0A8I6GMB2 Q63046	Aml1 Cbfa2 Cbfb Pax5 Runx1	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of HSCs	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 CDK-activating kinase assembly factor MAT1 Core-binding factor subunit beta Cyclin-H Cyclin-dependent kinase 7 (Fragment) E3 ubiquitin-protein ligase Endothelial transcription factor GATA-2 Erythroid transcription factor Histone-lysine N-methyltransferase LIM domain binding 1 LIM domain only protein 3 Polyubiquitin-B Polyubiquitin-C Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14 Proteasome 26S subunit, ATPase 6 Proteasome 26S subunit, non-ATPase 3 Proteasome 26S subunit, non-ATPase 7 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type Proteasome subunit beta type-10 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 Proteasome subunit beta Rhombotin-2 Runt-related transcription factor 1 TAL bHLH transcription factor 1, erythroid differentiation factor Transcription factor 12 Transcription factor E2-alpha Transcriptional coactivator YAP1 Tumor protein p73 Tyrosine-protein kinase Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JSL0 A0A0G2K1M1 A0A0G2K3R4 A0A0G2KAX0 A0A8I5ZM79 A0A8I5ZNE7 A0A8I5ZZU1 A0A8I6A5Y3 A0A8I6G409 A0A8I6GMB2 B0BN93 D4AA88 E9PT20 F1LMQ3 F1LMZ8 F1M0L3 F1M6I7 F7EX11 F7FGV7 G3V6W6 G3V8G2 O88761 P0CG51 P17220 P18420 P18421 P18422 P21670 P21677 P28064 P28073 P28075 P28077 P34064 P34067 P40112 P40307 P43429 P48004 P51514 P51952 P60901 P62193 P62198 P62982 Q2EJA0 Q4FZT9 Q4KM35 Q4V8E2 Q5XIC6 Q5XIU5 Q63046 Q63347 Q63429 Q63569 Q63570 Q63797 Q63798 Q924Y4 Q99MB5 Q9JHW0 Q9R1A0 Q9WTV5 Q9Z2X3	Abl1 Aml1 Cak Cak1 Cbfa2 Cbfb Ccnh Cdk7 Gata1 Gata2 Itch Kmt2a LOC100360645 LOC100360846 LOC100365869 Ldb1 Lmo2 Lmo3 Lmp10 Lmp2 Mecl1 Mll Mll1 Mnat1 Mo15 Mss1 Pan Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma8 Psmb1 Psmb10 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb6l Psmb6l1 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme4 Psmf1 Ptf1c Ring12 Rps27a Runx1 Sug1 Tal1 Tbp1 Tbp7 Tcf12 Tcf3 Tcfe2a Tp73 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Yap Yap1 Yap65	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of keratinocytes	Cathepsin K Procathepsin L Serpin family B member 13 Similar to Cathepsin L precursor (Major excreted protein) (MEP)	D3ZKA0 D3ZKC3 O35186 P07154	Cts7l2 Ctsk Ctsl Ctsl1 Ctsll3 RGD1308751 Serpinb13	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in differentiation of myeloid cells	Core-binding factor subunit beta Histone lysine acetyltransferase CREBBP Runt-related transcription factor 1	A0A8I6GMB2 Q63046 Q6JHU9	Aml1 Cbfa2 Cbfb Cbp Crebbp Runx1	Rattus norvegicus (Norway rat)
RUNX1 regulates transcription of genes involved in interleukin signaling	Core-binding factor subunit beta E74 like ETS transcription factor 1 Runt-related transcription factor 1	A0A8I6GMB2 G3V9V2 Q63046	Aml1 Cbfa2 Cbfb Elf1 Runx1	Rattus norvegicus (Norway rat)
RUNX3 regulates CDKN1A transcription	Cellular tumor antigen p53 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Runt-related transcription factor Transforming growth factor beta-1 proprotein Zinc finger homeobox 3	A0A0G2K7T0 F1M4Q6 O70437 P10361 P17246 P84025	Madh3 Madh4 P53 Runx3 Smad3 Smad4 Tgfb1 Tp53 Zfhx3	Rattus norvegicus (Norway rat)
RUNX3 regulates NOTCH signaling	Histone acetyltransferase Histone acetyltransferase Histone lysine acetyltransferase CREBBP Mastermind-like transcriptional coactivator 1 Mastermind-like transcriptional coactivator 2 Mastermind-like transcriptional coactivator 3 Recombination signal binding protein for immunoglobulin kappa J region Runt-related transcription factor SNW domain-containing protein 1 histone acetyltransferase	A0A0G2K7T0 A0A8I5Y222 A0A8I5ZP60 A0A8I5ZUF4 A0A8I6ABZ3 A0A8I6G641 D4A930 D4ACX5 F1M3B2 Q6JHU9	Cbp Crebbp Ep300 Kat2a Kat2b Maml1 Maml2 Maml3 Rbpj Runx3 Snw1	Rattus norvegicus (Norway rat)
RUNX3 regulates WNT signaling	Catenin beta-1 Lymphoid enhancer-binding factor 1 Runt-related transcription factor Transcription factor 7 like 1 Transcription factor 7 like 2 Transcription factor 7	A0A0G2K7T0 A0A8I5ZLY3 A0A8I5ZT78 A0A8I6A9A2 Q9QXN1 Q9WU82	Catnb Ctnnb1 Lef1 Runx3 Tcf7 Tcf7l1 Tcf7l2	Rattus norvegicus (Norway rat)
RUNX3 regulates YAP1-mediated transcription	Runt-related transcription factor TEA domain transcription factor 1 TEA domain transcription factor 2 Transcriptional coactivator YAP1 Transcriptional enhancer factor TEF-3 Transcriptional enhancer factor TEF-5	A0A0G2K2S9 A0A0G2K7T0 A0A8I5ZMT2 A0A8I6AIX9 A0A8I6GMF8 Q2EJA0	Runx3 Tead1 Tead2 Tead3 Tead4 Yap Yap1 Yap65	Rattus norvegicus (Norway rat)
RUNX3 regulates p14-ARF	Core-binding factor subunit beta G1/S-specific cyclin-D1 Histone deacetylase 4 Runt-related transcription factor Transforming growth factor beta-1 proprotein histone acetyltransferase	A0A0G2K7T0 A0A8I6G641 A0A8I6GMB2 P17246 P39948 Q99P99	Cbfb Ccnd1 Ep300 Hdac4 Runx3 Tgfb1	Rattus norvegicus (Norway rat)
Rap1 signalling	14-3-3 protein beta/alpha 14-3-3 protein zeta/delta RAF proto-oncogene serine/threonine-protein kinase RAP1 GTPase activating protein 2 RAS guanyl-releasing protein 1 RAS guanyl-releasing protein 2 Rap guanine nucleotide exchange factor 3 Rap guanine nucleotide exchange factor 4 (Fragment) Rap1 GTPase-activating protein Ras-related protein Rap-1A Ras-related protein Rap-1b Signal-induced proliferation-associated 1 cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cGMP-dependent protein kinase	A0A8I6A9E8 A0A8I6AQM4 E9PSX8 F1LV89 P0C643 P11345 P27791 P35213 P62836 P63102 P68182 Q62636 Q9R1K8 Q9Z1C7 Q9Z1C8	AABR07006724.1 Cgef2 Epac Epac1 Epac2 Krev1 Msfs1 Pkacb Prkaca Prkacb Prkg1 Raf Raf1 Rap1a Rap1b Rap1gap Rap1gap2 Rapgef3 Rapgef4 Rasgrp Rasgrp1 Rasgrp2 Sipa1 Ywhab Ywhaz	Rattus norvegicus (Norway rat)
Reactions specific to the complex N-glycan synthesis pathway	Alpha-(1,6)-fucosyltransferase Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Alpha-mannosidase 2 Alpha-mannosidase Carbohydrate sulfotransferase 10 Tissue alpha-L-fucosidase	A0A0G2JWG1 O54702 P17164 P28494 Q09326 Q6EV76	Chst10 Fuca Fuca1 Fut8 Gnt2 Man2a1 Man2a2 Mana2 Mgat2	Rattus norvegicus (Norway rat)	G70323CJ G82576YO
Reactions specific to the hybrid N-glycan synthesis pathway	Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase	Q02527	Gnt3 Mgat3	Rattus norvegicus (Norway rat)
Receptor Mediated Mitophagy	Autophagy protein 5 Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta FUN14 domain-containing protein 1 Microtubule-associated proteins 1A/1B light chain 3A Microtubule-associated proteins 1A/1B light chain 3B Proto-oncogene tyrosine-protein kinase Src Serine/threonine-protein kinase Serine/threonine-protein phosphatase PGAM5, mitochondrial Ubiquitin-like protein ATG12	D3ZMG0 F7FH41 P19139 P67874 Q2TBJ5 Q3MQ06 Q562B5 Q5BJS4 Q62625 Q6XVN8 Q9WUD9	Apg12l Atg12 Atg5 Ck2n Csnk2a1 Csnk2a2 Csnk2b Fundc1 Map1alc3 Map1lc3 Map1lc3a Map1lc3b Pgam5 Src Ulk1	Rattus norvegicus (Norway rat)
Receptor-type tyrosine-protein phosphatases	Interleukin 1 receptor accessory protein-like 2 Interleukin-1 receptor accessory protein-like 1 Interleukin-1 receptor accessory protein Leucine-rich repeat-containing protein 4B Liprin-alpha-3 Liprin-alpha-4 (Fragment) NT-3 growth factor receptor PPFIA binding protein 1 PPFIA binding protein 2 PTPRF interacting protein alpha 1 PTPRF interacting protein alpha 2 Receptor-type tyrosine-protein phosphatase F Receptor-type tyrosine-protein phosphatase S SLIT and NTRK-like family, member 1 SLIT and NTRK-like family, member 2 SLIT and NTRK-like family, member 3 SLIT and NTRK-like family, member 4 SLIT and NTRK-like family, member 5 SLIT and NTRK-like family, member 6 protein-tyrosine-phosphatase	A0A1B0GWS0 A0A1W2Q6G2 A0A8I5ZVX1 A0A8I6A6R5 A0A8I6AET5 A0A8I6AK94 A0A8I6ANB2 D3Z8D8 D3ZK41 D3ZP44 D4A062 M0R9U3 P0CC10 P59824 Q03351 Q63621 Q64604 Q64605 Q91Z79 Q91Z80	Il1rap Il1rapl1 Il1rapl2 Lar Lrig4 Lrrc4b Ntrk3 Ppfia1 Ppfia2 Ppfia3 Ppfia4 Ppfibp1 Ppfibp2 Ptprd Ptprf Ptprs Slitrk1 Slitrk2 Slitrk3 Slitrk4 Slitrk5 Slitrk6 Trkc	Rattus norvegicus (Norway rat)
Recognition and association of DNA glycosylase with site containing an affected purine	Adrenocortical dysplasia protein homolog DNA-(apurinic or apyrimidinic site) lyase Histone H2A type 2-A Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H4 N-glycosylase/DNA lyase Protection of telomeres protein 1 Telomeric repeat-binding factor 2-interacting protein 1 Telomeric repeat-binding factor	A0A0G2JX31 A0A0G2JXI9 A0A8I5ZSA8 A0A8I5ZYY0 A0A8I6A2W1 A0A8I6A7P3 A0A8I6AFW8 A0A8I6AWT3 A0A8I6G659 A9UMV8 D3ZJF7 D3ZKJ8 D3ZVK7 D3ZXP3 D4ACM0 G3V9C7 M0RBQ5 O70249 P0CC09 P62804 Q00729 Q4FZR5 Q5EAN7	Acd ENSRNOG00000062927 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 H2ab3 H2ac10 H2ac18 H2ac4 H2afb3 H2afx H2aj H2ax H2az2 H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H4c16 H4c2 H4f16 H4ft Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist2h2aa3 Hist4 Hist4h4 LOC100365043 LOC100910200 LOC120097726 LOC684797 Mmh Neil3 Ogg1 Ogh1 Pot1 Rap1 Terf2 Terf2ip Th2b	Rattus norvegicus (Norway rat)
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks	Amyloid beta precursor protein binding family B member 1 BRCA1-A complex subunit Abraxas 1 BRCA1-A complex subunit RAP80 BRCA1-associated RING domain protein 1 BRISC and BRCA1-A complex member 1 BRISC and BRCA1-A complex member 2 Breast cancer type 1 susceptibility protein homolog Bromodomain adjacent to zinc finger domain, 1B Cellular tumor antigen p53 DNA repair protein RAD50 Double-strand break repair protein MRE11 E3 ubiquitin-protein ligase RNF168 E3 ubiquitin-protein ligase RNF8 Eyes absent homolog Eyes absent homolog Eyes absent homolog Eyes absent homolog HECT-type E3 ubiquitin transferase Histone H2A Histone H2B type 1-A Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H2B Histone H4 Histone acetyltransferase KAT5 Lys-63-specific deubiquitinase BRCC36 Mediator of DNA damage checkpoint protein 1 Mitogen-activated protein kinase 8 Nibrin Nuclear receptor binding SET domain protein 2 Polyubiquitin-B Polyubiquitin-C Protein inhibitor of activated STAT, 4 SUMO-conjugating enzyme UBC9 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 Serine-protein kinase ATM Serine/threonine-protein phosphatase 5 Small ubiquitin-related modifier 1 Tumor protein p53 binding protein 1 Tyrosine-protein kinase UBX domain-containing protein 1 Ubiquitin B-like Ubiquitin carboxyl-terminal hydrolase BAP1 Ubiquitin-conjugating enzyme E2 variant 2 Ubiquitin-ribosomal protein eS31 fusion protein [histone H3]-trimethyl-L-lysine(9) demethylase [histone H3]-trimethyl-L-lysine(9) demethylase	A0A0G2JUC9 A0A0G2JXI9 A0A0G2JZ01 A0A0G2K5I7 A0A8I5ZQQ5 A0A8I5ZSA8 A0A8I6A2W1 A0A8I6A5Y3 A0A8I6A7P3 A0A8I6AFW8 A0A8I6ALC2 B2RYM5 B2RYR0 B5DFF9 D3ZHS6 D3ZVI5 D3ZXP3 D4A9J4 D4ACL8 E9PT20 E9PTJ3 F1LX86 F1M842 G3V9C7 M0RB75 M0RBQ5 O54952 P0CG51 P10361 P46933 P49185 P53042 P62804 P62982 P63281 Q00729 Q499N6 Q4KLN8 Q5I0F1 Q5I0H3 Q5PQK4 Q5U2M8 Q5XIJ6 Q63429 Q6P7Q1 Q7M767 Q99MK2 Q9JIL8 Q9JIL9 Q9JIM0 Q9QZH2	ABRAXAS1 Abl1 Abra1 Apbb1 Atm Babam1 Babam2 Bap1 Bard1 Baz1b Brca1 Brcc3 Brcc36 Bre Ccdc98 ENSRNOG00000064540 ENSRNOG00000066901 ENSRNOG00000068034 Eya1 Eya2 Eya3 Eya4 Fam175a Fe65 H2afx H2ax H2bc1 H2bc12l1 H2bc6 H2bcl1 H2bcl2 H2bu1 H4c16 H4c2 H4f16 H4ft Herc2 Hist1h2ba Hist1h2bc Hist1h2bg Hist1h2bo Hist1h2bq Hist1h4b Hist1h4m Hist4 Hist4h4 Htatip Jnk1 Kat5 Kdm4a Kdm4b LOC100360645 LOC100365043 LOC100910200 LOC684797 Mapk8 Mdc1 Merit40 Mms2 Mre11 Mre11a Nba1 Nbn Nbs1 Nsd2 P53 Pias4 Ppp5c Prkm8 Rad50 Rap80 Rir Rnf168 Rnf8 Rps27a Saks1 Smarca5 Sumo1 Th2b Tip60 Tip60b Tp53 Tp53bp1 Uba80 Ubb Ubbl1 Ubc Ubce9 Ubcep1 Ubcl1 Ube2i Ube2v2 Ubxn1 Uev2 Uimc1 Whsc1	Rattus norvegicus (Norway rat)
Recruitment of NuMA to mitotic centrosomes	14-3-3 protein epsilon 14-3-3 protein gamma A-kinase anchoring protein 9 ALMS1, centrosome and basal body associated protein Alpha-centractin CDK5 regulatory subunit-associated protein 2 Casein kinase I isoform delta Centrin 2 Centriolar coiled-coil protein 110 Centromere protein J Centrosomal protein 131 Centrosomal protein 135 Centrosomal protein 152 Centrosomal protein 164 Centrosomal protein 192 Centrosomal protein 250 Centrosomal protein 290 Centrosomal protein 43 Centrosomal protein 72 Centrosomal protein 78 Centrosomal protein of 41 kDa Centrosomal protein of 57 kDa Centrosomal protein of 63 kDa Centrosomal protein of 70 kDa Centrosomal protein of 76 kDa Cyclin-dependent kinase 1 Cytoplasmic dynein 1 heavy chain 1 Cytoplasmic dynein 1 intermediate chain 2 Cytoplasmic linker associated protein 1 Cytoskeleton associated protein 5 Dynactin 3-like 1 Dynactin subunit 1 Dynactin subunit 2 Dynein light chain 1, cytoplasmic Family with sequence similarity 29, member A Gamma-tubulin complex component Gamma-tubulin complex component HAUS augmin-like complex subunit 1 HAUS augmin-like complex subunit 8 HAUS augmin-like complex, subunit 4 HAUS augmin-like complex, subunit 5 HAUS augmin-like complex, subunit 7 Heat shock protein HSP 90-alpha Microtubule-associated protein RP/EB family member 1 Mitotic spindle organizing protein 1 Mitotic spindle organizing protein 2B NEDD1 gamma-tubulin ring complex targeting factor Ninein-like Nuclear distribution protein nudE homolog 1 Nuclear mitotic apparatus protein 1 Nucleoside diphosphate kinase homolog 7 Ofd1 centriole and centriolar satellite protein Outer dense fiber protein 2 Pericentrin Pericentriolar material 1 Platelet-activating factor acetylhydrolase IB subunit alpha Protein phosphatase 2 scaffold subunit A alpha SFI1 centrin binding protein SHH signaling and ciliogenesis regulator SDCCAG8 SS nuclear autoantigen 1 Serine/threonine-protein kinase PLK1 Serine/threonine-protein kinase PLK4 Tubulin alpha-1A chain Tubulin alpha-4A chain Tubulin beta-4B chain Tubulin beta-5 chain Tubulin gamma chain Tubulin gamma-1 chain Tubulin, gamma complex associated protein 3 Tubulin, gamma complex associated protein 6 cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase type II-beta regulatory subunit non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A0G2JYQ1 A0A0G2K4Y6 A0A0G2K548 A0A0G2K929 A0A8I5ZRX6 A0A8I5ZSK7 A0A8I5ZUW5 A0A8I5ZVW0 A0A8I5ZZ71 A0A8I6A1X1 A0A8I6A567 A0A8I6A773 A0A8I6A8A1 A0A8I6AA62 A0A8I6ACI2 A0A8I6AEZ5 A0A8I6AHQ6 A0A8I6AIV4 A0A8I6ALB1 A0A8I6GK03 A0A8I6GLP6 B2GUY1 B4F7A7 D3ZAH3 D3ZI35 D3ZMY8 D3ZTG6 D3ZVQ1 D4A194 D4A2A9 D4A3J9 D4A709 D4AB06 D4AEL8 F1LP29 F1LW91 F1M7J7 G3V931 G3V9W0 M0R9A9 P12369 P27791 P28023 P38650 P39951 P61983 P62260 P63004 P63170 P68370 P69897 P82995 P83888 P85515 Q06486 Q4KLY0 Q4KM37 Q4V7C1 Q5BK57 Q5PQQ9 Q5XI34 Q5XIF6 Q62673 Q62871 Q66HR2 Q6AYC0 Q6AYH5 Q6AYX5 Q6P9T8 Q99PS2 Q9ES39 Q9JLH5 Q9QXL7 Q9R0A8	AABR07000222.1 Actr1a Akap9 Alms1 Azi1 Ccdc5 Ccp110 Cdc2 Cdc2a Cdk1 Cdk5rap2 Cdkn1 Cenpj Cep131 Cep135 Cep152 Cep164 Cep192 Cep250 Cep290 Cep41 Cep43 Cep57 Cep63 Cep70 Cep72 Cep76 Cep78 Cetn2 Ck1e-2 Ckap5 Clasp1 Csnk1d Csnk1e Ctrn1 Dctn1 Dctn2 Dctn3l1 Dhc1 Dnch1 Dnchc1 Dnci2 Dncic2 Dncl1 Dnclc1 Dnec1 Dyhc Dync1h1 Dync1i2 Dynll1 Fgfr1op Haus1 Haus4 Haus5 Haus6 Haus7 Haus8 Hckid Hice1 Hsp86 Hsp90aa1 Hspca LOC309692 Lis-1 Lis1 Map1c Mapre1 Mzt1 Mzt2b Nde1 Nedd1 Nek2l1 Ninl Nme7 Nude Nude1 Numa1 Ny-sar-48 Odf2 Odf84 Ofd1 Pafah1b1 Pafaha Pcm1 Pcnt Pin Plk Plk1 Plk4 Ppp2r1a Prkaca Prkar2b Sak Sdccag8 Sfi1 Ssna1 Tsga14 Tuba1 Tuba1a Tuba4 Tuba4a Tubb2c Tubb4b Tubb5 Tubg Tubg1 Tubg2 Tubgcp3 Tubgcp4 Tubgcp5 Tubgcp6 Ywhae Ywhag	Rattus norvegicus (Norway rat)
Recruitment of mitotic centrosome proteins and complexes	14-3-3 protein epsilon 14-3-3 protein gamma A-kinase anchoring protein 9 ALMS1, centrosome and basal body associated protein Alpha-centractin CDK5 regulatory subunit-associated protein 2 Casein kinase I isoform delta Centrin 2 Centriolar coiled-coil protein 110 Centromere protein J Centrosomal protein 131 Centrosomal protein 135 Centrosomal protein 152 Centrosomal protein 164 Centrosomal protein 192 Centrosomal protein 250 Centrosomal protein 290 Centrosomal protein 43 Centrosomal protein 72 Centrosomal protein 78 Centrosomal protein of 41 kDa Centrosomal protein of 57 kDa Centrosomal protein of 63 kDa Centrosomal protein of 70 kDa Centrosomal protein of 76 kDa Cyclin-dependent kinase 11B Cyclin-dependent kinase 1 Cytoplasmic dynein 1 heavy chain 1 Cytoplasmic dynein 1 intermediate chain 2 Cytoplasmic linker associated protein 1 Cytoskeleton associated protein 5 Dynactin 3-like 1 Dynactin subunit 1 Dynactin subunit 2 Dynein light chain 1, cytoplasmic Family with sequence similarity 29, member A Gamma-tubulin complex component Gamma-tubulin complex component HAUS augmin-like complex subunit 1 HAUS augmin-like complex subunit 8 HAUS augmin-like complex, subunit 4 HAUS augmin-like complex, subunit 5 HAUS augmin-like complex, subunit 7 Heat shock protein HSP 90-alpha Microtubule-associated protein RP/EB family member 1 Mitotic spindle organizing protein 1 Mitotic spindle organizing protein 2B NEDD1 gamma-tubulin ring complex targeting factor Ninein-like Nuclear distribution protein nudE homolog 1 Nucleoside diphosphate kinase homolog 7 Ofd1 centriole and centriolar satellite protein Outer dense fiber protein 2 Pericentrin Pericentriolar material 1 Platelet-activating factor acetylhydrolase IB subunit alpha Protein phosphatase 2 scaffold subunit A alpha SFI1 centrin binding protein SHH signaling and ciliogenesis regulator SDCCAG8 SS nuclear autoantigen 1 Serine/threonine-protein kinase PLK1 Serine/threonine-protein kinase PLK4 Tubulin alpha-1A chain Tubulin alpha-4A chain Tubulin beta-4B chain Tubulin beta-5 chain Tubulin gamma chain Tubulin gamma-1 chain Tubulin, gamma complex associated protein 3 Tubulin, gamma complex associated protein 6 cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase type II-beta regulatory subunit non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase	A0A0G2JYQ1 A0A0G2K4Y6 A0A0G2K548 A0A0G2K929 A0A8I5ZRX6 A0A8I5ZSK7 A0A8I5ZUW5 A0A8I5ZVW0 A0A8I5ZZ71 A0A8I6A1X1 A0A8I6A567 A0A8I6A773 A0A8I6A8A1 A0A8I6AA62 A0A8I6ACI2 A0A8I6AEZ5 A0A8I6AHQ6 A0A8I6AIV4 A0A8I6ALB1 A0A8I6GK03 A0A8I6GLP6 B2GUY1 B4F7A7 D3ZAH3 D3ZI35 D3ZMY8 D3ZTG6 D3ZVQ1 D4A194 D4A2A9 D4A3J9 D4A709 D4AB06 D4AEL8 F1LP29 F1M7J7 G3V931 G3V9W0 M0R9A9 P12369 P27791 P28023 P38650 P39951 P46892 P61983 P62260 P63004 P63170 P68370 P69897 P82995 P83888 P85515 Q06486 Q4KLY0 Q4KM37 Q4V7C1 Q5BK57 Q5PQQ9 Q5XI34 Q5XIF6 Q62673 Q62871 Q66HR2 Q6AYC0 Q6AYH5 Q6AYX5 Q6P9T8 Q99PS2 Q9ES39 Q9JLH5 Q9QXL7 Q9R0A8	AABR07000222.1 Actr1a Akap9 Alms1 Azi1 Ccdc5 Ccp110 Cdc2 Cdc2a Cdc2l1 Cdk1 Cdk11 Cdk11b Cdk5rap2 Cdkn1 Cenpj Cep131 Cep135 Cep152 Cep164 Cep192 Cep250 Cep290 Cep41 Cep43 Cep57 Cep63 Cep70 Cep72 Cep76 Cep78 Cetn2 Ck1e-2 Ckap5 Clasp1 Csnk1d Csnk1e Ctrn1 Dctn1 Dctn2 Dctn3l1 Dhc1 Dnch1 Dnchc1 Dnci2 Dncic2 Dncl1 Dnclc1 Dnec1 Dyhc Dync1h1 Dync1i2 Dynll1 Fgfr1op Haus1 Haus4 Haus5 Haus6 Haus7 Haus8 Hckid Hice1 Hsp86 Hsp90aa1 Hspca LOC309692 Lis-1 Lis1 Map1c Mapre1 Mzt1 Mzt2b Nde1 Nedd1 Nek2l1 Ninl Nme7 Nude Nude1 Ny-sar-48 Odf2 Odf84 Ofd1 Pafah1b1 Pafaha Pcm1 Pcnt Pin Plk Plk1 Plk4 Ppp2r1a Prkaca Prkar2b Sak Sdccag8 Sfi1 Ssna1 Tsga14 Tuba1 Tuba1a Tuba4 Tuba4a Tubb2c Tubb4b Tubb5 Tubg Tubg1 Tubg2 Tubgcp3 Tubgcp4 Tubgcp5 Tubgcp6 Ywhae Ywhag	Rattus norvegicus (Norway rat)
Recycling of bile acids and salts	ATP-binding cassette sub-family C member 3 Albumin Bile acid receptor Bile acid-CoA Bile salt export pump Gastrotropin Hepatic sodium/bile acid cotransporter Ileal sodium/bile acid cotransporter Long-chain fatty acid transport protein 5 Nuclear receptor coactivator 2 Nuclear receptor coactivator Retinoic acid receptor RXR-alpha Solute carrier family 51 subunit alpha Solute carrier family 51 subunit beta Solute carrier organic anion transporter family member 1A4 Solute carrier organic anion transporter family member 1B2 StAR-related lipid transfer domain containing 5	A0A8I6APA0 D3ZN38 D3ZYJ2 D4AC81 O35913 O70127 O88563 P02770 P26435 P80020 Q05343 Q62633 Q62735 Q63276 Q9ES38 Q9QZX8 Q9WUI9	Abcb11 Abcc3 Acsb Alb Baat Bar Bsep Cmoat2 Fabp6 Fatp5 Fxr Ilbp Illbp Mlp2 Mrp3 Ncoa1 Ncoa2 Nr1h4 Nr2b1 Ntcp Ntcp2 Oatp1a4 Oatp1b2 Oatp2 Rip14 Rxra Slc10a1 Slc10a2 Slc21a10 Slc21a5 Slc27a5 Slc51a Slc51b Slco1a4 Slco1b2 Spgp Stard5 Tif2 Vlacsr	Rattus norvegicus (Norway rat)

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