GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 901 - 925 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▲ GlyTouCan ID
Beta-oxidation of pristanoyl-CoA
  • Acot8
  • Acox2
  • Acox3
  • Acoxl
  • Amacr
  • Cot
  • Crat
  • Crot
  • Edh17b4
  • Hsd17b4
  • Prcox
  • Pte1
  • Scp-2
  • Scp2
  • Thcox
Rattus norvegicus (Norway rat)
Cellular response to mitochondrial stress
  • Bcap37
  • Dele
  • Dele1
  • Eif2a
  • Eif2ak1
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Hri
  • Oma1
  • Phb2
  • Stoml2
  • Yme1l1
Rattus norvegicus (Norway rat)
Endosomal Sorting Complex Required For Transport (ESCRT)
  • Chmp2a
  • Chmp2b
  • Chmp3
  • Chmp4b
  • Chmp4c
  • Chmp5
  • Chmp6
  • Chmp7
  • Eap20
  • Eap30
  • Eap45
  • Fam125a
  • Hgs
  • Hrs
  • Hrs2
  • LOC100360645
  • Mvb12a
  • Mvb12b
  • NEWGENE_1309258
  • Rps27a
  • Snf8
  • Stam
  • Stam2
  • Tsg101
  • Uba80
  • Ubap1
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vps24
  • Vps25
  • Vps28
  • Vps36
  • Vps37b
  • Vps37c
  • Vps37d
  • Vps4a
  • Vps4b
  • Vta1
  • vps4-A
Rattus norvegicus (Norway rat)
NTRK2 activates RAC1
  • Bdnf
  • Dock3
  • Fyn
  • Ntrk2
  • Rac
  • Rac1
  • Trkb
Rattus norvegicus (Norway rat)
ERBB2 Regulates Cell Motility
  • Arha
  • Arha2
  • Btc
  • Diap1
  • Diaph1
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Memo1
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Rhoa
Rattus norvegicus (Norway rat)
Alternative complement activation
  • C3
Rattus norvegicus (Norway rat)
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex
  • Ccnb1
  • Cdc2
  • Cdc25c
  • Cdc2a
  • Cdk1
  • Cdkn1
  • Msfs1
  • Sfn
  • Wee1
  • Ywhab
  • Ywhae
  • Ywhag
  • Ywhah
  • Ywhaq
  • Ywhaz
Rattus norvegicus (Norway rat)
Axonal growth stimulation
  • Arha
  • Arha2
  • Arhgdia
  • Ngf
  • Ngfb
  • Ngfr
  • Rhoa
  • Tnfrsf16
Rattus norvegicus (Norway rat)
A tetrasaccharide linker sequence is required for GAG synthesis
  • Agrin
  • Agrn
  • B3galt6
  • B3gat1
  • B3gat2
  • B4galt7
  • Bcan
  • Behab
  • Bgn
  • Caleb
  • Cspg2
  • Cspg3
  • Cspg4
  • Cspg5
  • Dcn
  • Glcats
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Hspg1
  • Ncan
  • Ng2
  • Ngc
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Synd1
  • Synd2
  • Synd3
  • Synd4
  • Vcan
  • Xylt1
  • Xylt2
Rattus norvegicus (Norway rat)
GABA B receptor activation
  • Gabbr1
  • Gabbr2
  • Gpr51
Rattus norvegicus (Norway rat)
MAPK6/MAPK4 signaling
  • Aib1
  • Borg1
  • Ccnd3
  • Cdc10
  • Cdc14a
  • Cdc14b
  • Cdc2
  • Cdc2a
  • Cdc42
  • Cdc42ep2
  • Cdk1
  • Cdkn1
  • Cep2
  • Crm1
  • Dnajb1
  • Duo
  • Erk3
  • Etv4
  • Foxo1
  • Foxo1a
  • Foxo3
  • Hapip
  • Hsp27
  • Hspb1
  • Kalrn
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mapk4
  • Mapk6
  • Mapkapk5
  • Mecl1
  • Mss1
  • Ncoa3
  • Pak1
  • Pak2
  • Pak3
  • Pkacb
  • Prkaca
  • Prkacb
  • Prkm4
  • Prkm6
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rac
  • Rac1
  • Ring12
  • Rps27a
  • Sept7
  • Septin7
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Xpo1
Rattus norvegicus (Norway rat)
Synthesis of glycosylphosphatidylinositol (GPI)
  • Dpm2
  • Piga
  • Pigb
  • Pigc
  • Pigf
  • Pigg
  • Pigh
  • Pigl
  • Pigm
  • Pign
  • Pigp
  • Pigq
  • Pigv
  • Pigw
  • Pigx
Rattus norvegicus (Norway rat)
Biotin transport and metabolism
  • Acac
  • Acaca
  • Acacb
  • Btd
  • Hlcs
  • Mcca
  • Mccc1
  • Mccc2
  • Pc
  • Pcca
  • Pccb
  • Pdzd11
  • Slc5a6
  • Smvt
Rattus norvegicus (Norway rat)
Miscellaneous transport and binding events
  • Add1
  • Add2
  • Add3
  • Ank
  • Ankh
  • Azgp1
  • Ctns
  • Dmtn
  • Iag2
  • Lrrc5
  • Lrrc8
  • Lrrc8a
  • Lrrc8b
  • Lrrc8c
  • Lrrc8d
  • Lrrc8e
  • Magt1
  • Mrs2
  • Mrs2l
  • Nipa1
  • Nipa2
  • Nipal1
  • Nipal2
  • Nipal3
  • Nipal4
  • Pip
  • Pqlc2
  • Rpt
  • Slc66a1
  • Tusc3
Rattus norvegicus (Norway rat)
Acyl chain remodelling of PS
  • Cpla2
  • Grcc3f
  • H-rev107
  • Hrasls3
  • Hrev107
  • Lpcat3
  • Lpcat4
  • Mboat1
  • Mboat5
  • Oact5
  • Osbpl10
  • Osbpl5
  • Osbpl8
  • Pla1a
  • Pla2g10
  • Pla2g12a
  • Pla2g16
  • Pla2g1b
  • Pla2g2a
  • Pla2g2d
  • Pla2g2f
  • Pla2g4
  • Pla2g4a
  • Pla2g4b
  • Pla2g4d
  • Pla2g4e
  • Pla2g4f
  • Pla2g5
  • Pla2r1
  • Plaat3
  • Pspla1
  • Rlp-3
Rattus norvegicus (Norway rat)
Cyclin E associated events during G1/S transition
  • Akt1
  • Akt2
  • Akt3
  • Cables1
  • Cak
  • Cak1
  • Ccne
  • Ccne1
  • Ccne2
  • Ccnh
  • Cdc25a
  • Cdk2
  • Cdk7
  • Cdkn1a
  • Cdkn1b
  • Cdkn2
  • Mnat1
  • Mo15
  • Rb-1
  • Rb1
  • Wee1
  • p27Kip1
Rattus norvegicus (Norway rat)
Interferon gamma signaling
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Cish3
  • Erk1
  • Erk2
  • Ifng
  • Ifngr1
  • Ifngr2
  • Jak1
  • Jak2
  • Mapk
  • Mapk1
  • Mapk3
  • Pkcd
  • Prkcd
  • Prkm1
  • Prkm3
  • Ptph6
  • Ptpn6
  • Socs1
  • Socs3
  • Stat1
  • Stat4
  • Yb1
  • Ybx1
Rattus norvegicus (Norway rat)
ADP signalling through P2Y purinoceptor 12
  • Gnai-1
  • Gnai-2
  • Gnai-3
  • Gnai1
  • Gnai2
  • Gnai3
  • Gnat-3
  • Gnat3
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • P2ry12
  • P2y12
Rattus norvegicus (Norway rat)
Deadenylation of mRNA
  • Ddx48
  • Eif4a1
  • Eif4a2
  • Eif4a3
  • Eif4e
  • Eif4g1
  • PAN3
  • Pabp1
  • Pabpc1
  • Paip1
  • Pan2
  • Pan3
  • Usp52
Rattus norvegicus (Norway rat)
Metabolism of folate and pterines
  • Aldh1l1
  • Aldh1l2
  • Dhfr
  • Folr2
  • Fpgs
  • Fthfd
  • Hcp1
  • Mthfd
  • Mthfd1
  • Mthfd1l
  • Mthfd2
  • Mthfd2l
  • Mthfr
  • Mthfs
  • Pcft
  • Shmt1
  • Shmt2
  • Slc19a1
  • Slc25a32
  • Slc46a1
Rattus norvegicus (Norway rat)
Formation of ATP by chemiosmotic coupling
  • Atp5a1
  • Atp5b
  • Atp5c
  • Atp5c1
  • Atp5d
  • Atp5e
  • Atp5f
  • Atp5f1
  • Atp5f1a
  • Atp5f1b
  • Atp5f1c
  • Atp5f1d
  • Atp5f1e
  • Atp5g1
  • Atp5g2
  • Atp5g3
  • Atp5h
  • Atp5i
  • Atp5j
  • Atp5j2
  • Atp5jd
  • Atp5l
  • Atp5mc1
  • Atp5mc2
  • Atp5mc3
  • Atp5me
  • Atp5mf
  • Atp5mg
  • Atp5o
  • Atp5pb
  • Atp5pd
  • Atp5pf
  • Atp5po
  • Atp5s
  • Atp6
  • Atp8
  • Atpase6
  • Atpase8
  • Dmac2l
  • Mt-atp6
  • Mt-atp8
  • Mtatp6
  • Mtatp8
Rattus norvegicus (Norway rat)
NRIF signals cell death from the nucleus
  • Aph1a
  • Cenpr
  • Itgb3bp
  • LOC100360645
  • Ncstn
  • Ngf
  • Ngfb
  • Ngfr
  • Nrif3
  • Ps2
  • Psen1
  • Psen2
  • Psenen
  • Psnl1
  • Psnl2
  • Rps27a
  • Sqstm1
  • Tnfrsf16
  • Traf6
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Zip
Rattus norvegicus (Norway rat)
Triglyceride catabolism
  • Blbp
  • FABP12
  • Fabp1
  • Fabp2
  • Fabp3
  • Fabp4
  • Fabp5
  • Fabp6
  • Fabp7
  • Fabp9
  • Fabpi
  • Gpd2
  • Ilbp
  • Illbp
  • Perf15
  • Pnpla4
  • Pnpla5
  • RGD1562200
Rattus norvegicus (Norway rat)
Reelin signalling pathway
  • Dab1
  • Fyn
  • Reln
  • Ruk
  • Seta
  • Sh3kbp1
  • Vldlr
Rattus norvegicus (Norway rat)
G alpha (z) signalling events
  • Adcy1
  • Adcy2
  • Adcy3
  • Adcy4
  • Adcy5
  • Adcy6
  • Adcy7
  • Adcy8
  • Adcy9
  • Adra2a
  • Adra2b
  • Adra2c
  • Gnaz
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Rgs16
  • Rgs17
  • Rgs20
  • Rgsr
Rattus norvegicus (Norway rat)

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Supported by JST NBDC Grant Number JPMJND2204

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