GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **1001 - 1025** of **1070** in total

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Pathway Name	Protein Name ▲	UniProt ID	Gene Symbol	Organism
Intestinal lipid absorption	NPC1-like intracellular cholesterol transporter 1	Q6T3U3	Npc1l1	Rattus norvegicus (Norway rat)
Activated NTRK3 signals through PI3K	NT-3 growth factor receptor Neurotrophin-3 Proto-oncogene tyrosine-protein kinase Src	P18280 Q03351 Q9WUD9	Ntf-3 Ntf3 Ntrk3 Src Trkc	Rattus norvegicus (Norway rat)
NTF3 activates NTRK3 signaling	NT-3 growth factor receptor Neurotrophin-3	P18280 Q03351	Ntf-3 Ntf3 Ntrk3 Trkc	Rattus norvegicus (Norway rat)
Sodium-coupled sulphate, di- and tri-carboxylate transporters	Na(+)/citrate cotransporter Na(+)/dicarboxylate cotransporter 3 Sodium sulfate cotransporter-2 Solute carrier family 13 member 1 Solute carrier family 13 member 2	P70545 Q07782 Q5EC47 Q8CJ44 Q9Z0Z5	Nact Nadc1 Nadc3 Nas1 Nasi1 Sdct1 Sdct2 Slc13a1 Slc13a2 Slc13a3 Slc13a4 Slc13a5	Rattus norvegicus (Norway rat)
Peptide hormone biosynthesis	Neuroendocrine convertase 1 Pro-opiomelanocortin	P01194 P28840	Bdp Nec-1 Nec1 Pcsk1 Pomc Pomc2	Rattus norvegicus (Norway rat)
Pre-NOTCH Processing in Golgi	Neurogenic locus notch homolog protein 3 Transmembrane emp24 domain-containing protein 2	Q63524 Q9R172	Notch3 Rnp24 Tmed2	Rattus norvegicus (Norway rat)
Tachykinin receptors bind tachykinins	Neuromedin-K receptor Protachykinin-1 Substance-K receptor Substance-P receptor Tachykinin-3	P06767 P08435 P14600 P16177 P16610	Nka Nkna Nknb Tac1 Tac1r Tac2 Tac2r Tac3 Tac3r Tacr1 Tacr2 Tacr3	Rattus norvegicus (Norway rat)
Neurophilin interactions with VEGF and VEGFR	Neuropilin-1 Neuropilin-2 Vascular endothelial growth factor receptor 1 Vascular endothelial growth factor receptor 2	O08775 O35276 P53767 Q9QWJ9	Flk1 Flt-1 Flt1 Kdr Nrp1 Nrp2 Vegfr1	Rattus norvegicus (Norway rat)
TNFR1-mediated ceramide production	Neutral sphingomyelinase activation associated factor Small ribosomal subunit protein RACK1 Sphingomyelin phosphodiesterase 2 Sphingomyelin phosphodiesterase 3 Tumor necrosis factor receptor superfamily member 1A Tumor necrosis factor	F1M974 O35049 P16599 P22934 P63245 Q9ET64	Cca1 Gnb2l1 Nsmaf Rack1 Smpd2 Smpd3 Tnf Tnfa Tnfr-1 Tnfr1 Tnfrsf1a Tnfsf2	Rattus norvegicus (Norway rat)
Nitric oxide stimulates guanylate cyclase	Nitric oxide synthase 1 Nitric oxide synthase 3 Nitric oxide synthase, inducible	P29476 Q06518 Q62600	Bnos Nos1 Nos2 Nos3	Rattus norvegicus (Norway rat)
NOSIP mediated eNOS trafficking	Nitric oxide synthase 3 Nitric oxide synthase-interacting protein	A0A8I5ZL30 Q62600	Nos3 Nosip	Rattus norvegicus (Norway rat)
LXRs regulate gene expression to control bile acid homeostasis	Nuclear receptor co-repressor 2 Nuclear receptor coactivator Oxysterols receptor LXR-alpha Oxysterols receptor LXR-beta Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta (Fragment)	A0A0G2JU91 A0A8I6APA0 P49743 Q05343 Q62685 Q62755	Lxra Lxrb Ncoa1 Ncor2 Nr1h2 Nr1h3 Nr2b1 Nr2b2 Rcor-1 Rxra Rxrb	Rattus norvegicus (Norway rat)
Organic anion transport	Organic anion transporter 3 Solute carrier family 22 member 12 Solute carrier family 22 member 6 Solute carrier family 22 member 7	O35956 Q3ZAV1 Q5RLM2 Q9R1U7	Nlt Oat1 Oat2 Oat3 Slc22a12 Slc22a6 Slc22a7 Slc22a8 Urat1	Rattus norvegicus (Norway rat)
Organic cation transport	Organic cation/carnitine transporter 2 Runt-related transcription factor 1 Solute carrier family 22 member 16 Solute carrier family 22 member 18 Solute carrier family 22 member 1 Solute carrier family 22 member 2 Solute carrier family 22 member 3 Solute carrier family 22 member 4 Solute carrier family 22, member 15	A0A8I5ZMN2 D4A271 O70594 O88446 Q63046 Q63089 Q6AY78 Q9R0W2 Q9R141	Aml1 Cbfa2 Oct1 Oct2 Oct3 Octn1 Octn2 Orctl2 Runx1 Slc22a1 Slc22a15 Slc22a16 Slc22a18 Slc22a2 Slc22a3 Slc22a4 Slc22a5 Tssc5	Rattus norvegicus (Norway rat)
Metabolism of polyamines	Ornithine decarboxylase S-adenosylmethionine decarboxylase proenzyme Spermidine synthase Spermine synthase, pseudogene 2	A0A8I6AVR1 M0RCX8 P09057 P17708	Amd1 Odc Odc1 Sms Sms-ps2 Srm	Rattus norvegicus (Norway rat)
Vasopressin-like receptors	Oxytocin receptor Oxytocin-neurophysin 1 Vasopressin V1a receptor Vasopressin V2 receptor Vasopressin-neurophysin 2-copeptin	P01179 P01186 P30560 P70536 Q00788	Avp Avpr1a Avpr2 Ot Otr Oxt Oxtr	Rattus norvegicus (Norway rat)
Platelet homeostasis	P2X purinoceptor 1 P2X purinoceptor 2 P2X purinoceptor 3 P2X purinoceptor 4 P2X purinoceptor 5 P2X purinoceptor 6 P2X purinoceptor 7 Platelet-activating factor acetylhydrolase 2, cytoplasmic	P47824 P49653 P49654 P51577 P51578 P51579 P83006 Q64663	P2rx1 P2rx2 P2rx3 P2rx4 P2rx5 P2rx6 P2rx7 P2rxl1 Pafah2	Rattus norvegicus (Norway rat)
Glucuronidation	Palmitoyl-protein thioesterase ABHD10, mitochondrial UDP-glucuronosyltransferase 1-2 UDP-glucuronosyltransferase 1-6 UDP-glucuronosyltransferase 1A1 UDP-glucuronosyltransferase 1A3 UDP-glucuronosyltransferase 1A5 UDP-glucuronosyltransferase 1A7 UDP-glucuronosyltransferase 1A8 UDP-glucuronosyltransferase 2A1 UDP-glucuronosyltransferase 2B15 UDP-glucuronosyltransferase 2B17 UDP-glucuronosyltransferase 2B1 UDP-glucuronosyltransferase 2B2 UDP-glucuronosyltransferase 2B37 UDP-glucuronosyltransferase 2B7 UDP-glucuronosyltransferase glucuronosyltransferase	A0A0G2K4R2 F1LTB8 P08430 P08541 P08542 P09875 P19488 P20720 P36510 P36511 Q5I0K5 Q62789 Q64550 Q64633 Q64634 Q64637 Q64638	Abhd10 RGD1559459 Udpgtr2 Ugt1 Ugt1a1 Ugt1a2 Ugt1a3 Ugt1a5 Ugt1a6 Ugt1a7 Ugt1a7c Ugt1a8 Ugt2a-1 Ugt2a1 Ugt2b Ugt2b1 Ugt2b12 Ugt2b15 Ugt2b17 Ugt2b2 Ugt2b3 Ugt2b34l1 Ugt2b36 Ugt2b37 Ugt2b4 Ugt2b5 Ugt2b6 Ugt2b7 Ugt2b8 Ugt3a1 Ugt3a2	Rattus norvegicus (Norway rat)
Synthesis of PS	Phosphatidylserine synthase 1 Phosphatidylserine synthase 2	B2GV22 Q5PQL5	Ptdss1 Ptdss2	Rattus norvegicus (Norway rat)
VEGF binds to VEGFR leading to receptor dimerization	Placenta growth factor Vascular endothelial growth factor A Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D Vascular endothelial growth factor receptor 1 Vascular endothelial growth factor receptor 2 Vascular endothelial growth factor receptor 3	O08775 O35251 O35485 O35757 P16612 P53767 Q63434 Q91ZT1	Figf Flk1 Flt-1 Flt-4 Flt1 Flt4 Kdr Pgf Plgf Vegf Vegfa Vegfb Vegfc Vegfd Vegfr1 Vegfr3 Vrf	Rattus norvegicus (Norway rat)
VEGF ligand-receptor interactions	Placenta growth factor Vascular endothelial growth factor A Vascular endothelial growth factor B Vascular endothelial growth factor C Vascular endothelial growth factor D	O35251 O35485 O35757 P16612 Q63434	Figf Pgf Plgf Vegf Vegfa Vegfb Vegfc Vegfd Vrf	Rattus norvegicus (Norway rat)
Sema4D induced cell migration and growth-cone collapse	Plexin B1 Receptor tyrosine-protein kinase erbB-2 Rho family GTPase 1 Rho guanine nucleotide exchange factor 11 Rho guanine nucleotide exchange factor 12 Rho-associated protein kinase 1 Rho-associated protein kinase 2 Rho-related GTP-binding protein RhoB Semaphorin 4D Transforming protein RhoA	A0A0G2K860 A0A8I6G5Q1 D3ZDX5 P06494 P61589 P62747 Q5FVG9 Q62868 Q63644 Q9ES67	Arha Arha2 Arhb Arhgef11 Arhgef12 Erbb2 Neu Plxnb1 Rhoa Rhob Rnd1 Rock1 Rock2 Sema4d	Rattus norvegicus (Norway rat)
Biosynthesis of electrophilic ω-3 PUFA oxo-derivatives	Polyunsaturated fatty acid 5-lipoxygenase Prostaglandin G/H synthase 2	P12527 P35355	Alox5 Cox-2 Cox2 Ptgs2	Rattus norvegicus (Norway rat)
Biosynthesis of DHA-derived SPMs	Polyunsaturated fatty acid lipoxygenase ALOX12 Polyunsaturated fatty acid lipoxygenase ALOX15 Prostaglandin G/H synthase 2	F1LQ70 P35355 Q02759	Alox12 Alox12l Alox15 Cox-2 Cox2 Ptgs2	Rattus norvegicus (Norway rat)
Tandem of pore domain in a weak inwardly rectifying K+ channels (TWIK)	Potassium channel subfamily K member 1 Potassium channel subfamily K member Potassium channel subfamily K member	D4A806 G3V8R8 Q9Z2T2	Kcnk1 Kcnk6 Kcnk7	Rattus norvegicus (Norway rat)

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