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Alliance of Genome Resources

Alliance of Genome Resources is a gene dataset, which contains curated genome information essential for the understanding of the genetics and genomic basis of human biology, health and disease. All data is retrieved from six major model organism databases and the Gene Ontology including FlyBase, Mouse Genome Database (MGI), Rat Genome Database (RGD), Saccharomyces Genome Database (SGD), WormBase, Zebrafish Information Network (ZFIN), and the GO Consortium. In GlyCosmos, only glycan-related disease information has been extracted from Alliance of Genome Resources.

Source	Last Updated
Alliance of Genome Resources	January 28, 2025

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Disease ID	Disease Name	Alliance of Genome Resources ID	Species	Gene ID	Gene Symbol	Evidence	References ▲
DOID:1596	depressive disorder	RGD:3714	Rattus norvegicus (Norway rat)	25553	Slc6a4	mutant phenotype evidence used in manual assertion	PMID:18295409
DOID:4606	bile duct cancer	HGNC:613	Homo sapiens (human)	348	APOE	inference by association of genotype from phenotype used in manual assertion	PMID:18296645
DOID:10211	cholelithiasis	HGNC:613	Homo sapiens (human)	348	APOE	inference by association of genotype from phenotype used in manual assertion	PMID:18296645
DOID:4606	bile duct cancer	HGNC:603	Homo sapiens (human)	338	APOB	inference by association of genotype from phenotype used in manual assertion	PMID:18296645
DOID:3121	gallbladder cancer	HGNC:613	Homo sapiens (human)	348	APOE	inference by association of genotype from phenotype used in manual assertion	PMID:18296645
DOID:4989	pancreatitis	RGD:3645	Rattus norvegicus (Norway rat)	24770	Ccl2	mutant phenotype evidence used in manual assertion	PMID:18297440
DOID:4362	cervical cancer	HGNC:1725	Homo sapiens (human)	993	CDC25A	direct assay evidence used in manual assertion	PMID:18299147
DOID:5419	schizophrenia	HGNC:5234	Homo sapiens (human)	3305	HSPA1L	inference by association of genotype from phenotype used in manual assertion	PMID:18299791
DOID:5419	schizophrenia	HGNC:5232	Homo sapiens (human)	3303	HSPA1A	inference by association of genotype from phenotype used in manual assertion	PMID:18299791
DOID:5419	schizophrenia	HGNC:5233	Homo sapiens (human)	3304	HSPA1B	inference by association of genotype from phenotype used in manual assertion	PMID:18299791
DOID:2316	brain ischemia	HGNC:533	Homo sapiens (human)	301	ANXA1	direct assay evidence used in manual assertion	PMID:1830327
DOID:90	degenerative disc disease	HGNC:14872	Homo sapiens (human)	54829	ASPN	inference by association of genotype from phenotype used in manual assertion	PMID:18304494
DOID:11204	allergic conjunctivitis	HGNC:5318	Homo sapiens (human)	3371	TNC	inference by association of genotype from phenotype used in manual assertion	PMID:18305139
DOID:0081101	nonautoimmune hyperthyroidism	HGNC:12373	Homo sapiens (human)	7253	TSHR	inference by association of genotype from phenotype used in manual assertion	PMID:18306976 RGD:7240710
DOID:850	lung disease	RGD:2048	Rattus norvegicus (Norway rat)	29290	Adora1	direct assay evidence used in manual assertion	PMID:18307414
DOID:332	amyotrophic lateral sclerosis	HGNC:11571	Homo sapiens (human)	23435	TARDBP	inference by association of genotype from phenotype used in manual assertion	PMID:18309045 PMID:18372902 PMID:21651514
DOID:1793	pancreatic cancer	HGNC:3012	Homo sapiens (human)	1806	DPYD	mutant phenotype evidence used in manual assertion	PMID:18309485
DOID:3083	chronic obstructive pulmonary disease	HGNC:10803	Homo sapiens (human)	6441	SFTPD	direct assay evidence used in manual assertion	PMID:18310480
DOID:11335	sarcoidosis	HGNC:1606	Homo sapiens (human)	1234	CCR5	inference by association of genotype from phenotype used in manual assertion	PMID:18311470
DOID:1019	osteomyelitis	HGNC:4944	Homo sapiens (human)	3119	HLA-DQB1	inference by association of genotype from phenotype used in manual assertion	PMID:18312480
DOID:2841	asthma	HGNC:15633	Homo sapiens (human)	54106	TLR9	inference by association of genotype from phenotype used in manual assertion	PMID:18312481
DOID:0050570	congenital disorder of glycosylation type I	SGD:S000000116	Saccharomyces cerevisiae S288C	852261	RFT1	genetic interaction evidence used in manual assertion	PMID:18313027
DOID:0050570	congenital disorder of glycosylation type I	SGD:S000000116	Saccharomyces cerevisiae S288C	852261	RFT1	sequence similarity evidence used in manual assertion	PMID:18313027
DOID:10763	hypertension	HGNC:9236	Homo sapiens (human)	5468	PPARG	mutant phenotype evidence used in manual assertion	PMID:18316027
DOID:9352	type 2 diabetes mellitus	HGNC:349	Homo sapiens (human)	197	AHSG	inference by association of genotype from phenotype used in manual assertion	PMID:18316360

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