GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 251 - 275 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Biosynthesis of EPA-derived SPMs
  • Cox-2
  • Cox2
  • Ptgs2
Rattus norvegicus (Norway rat)
Biosynthesis of DPAn-3 SPMs
  • Cox-2
  • Cox2
  • Ptgs2
Rattus norvegicus (Norway rat)
COX reactions
  • Cox-1
  • Cox1
  • Ptgs1
Rattus norvegicus (Norway rat)
Lectin pathway of complement activation
  • Colec10
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
Rattus norvegicus (Norway rat)
NCAM1 interactions
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • LOC100911572
  • Ncam
  • Ncam1
  • Siat8b
  • St8sia2
  • St8sia4
  • Stx
Rattus norvegicus (Norway rat)
Collagen degradation
  • Col13a1
  • Col15a1
  • Col18a1
  • Col19a1
  • Col25a1
  • Col26a1
  • Cts7l2
  • Ctsb
  • Ctsd
  • Ctsk
  • Ctsll3
  • Fur
  • Furin
  • LOC100365995
  • LOC100909752
  • LOC103690164
  • LOC687064
  • Mmel
  • Mmp-7
  • Mmp1
  • Mmp10
  • Mmp12
  • Mmp13
  • Mmp14
  • Mmp15
  • Mmp1a
  • Mmp2
  • Mmp20
  • Mmp3
  • Mmp7
  • Mmp8
  • Mmp9
  • Mtmmp
  • Pcsk3
  • Phykpl
  • Prss3
  • RGD1308751
  • Tmprss6
  • Try4
  • Try5
Rattus norvegicus (Norway rat)
Assembly of collagen fibrils and other multimeric structures
  • Col10a1
  • Col11a1
  • Col11a2
  • Col15a1
  • Col18a1
  • Col1a1
  • Col1a2
  • Col2a1
  • Col3a1
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • Col5a1
  • Col5a2
  • Col5a3
  • Col8a1
  • Col8a2
  • Cts7l2
  • Ctsb
  • Ctsl
  • Ctsl1
  • Ctsll3
  • Ctss
  • LOC100909752
  • LOC100911572
  • Mmp-7
  • Mmp13
  • Mmp20
  • Mmp3
  • Mmp7
  • Mmp9
  • RGD1308751
Rattus norvegicus (Norway rat)
Collagen chain trimerization
  • Col10a1
  • Col11a1
  • Col11a2
  • Col13a1
  • Col14a1
  • Col15a1
  • Col16a1
  • Col17a1
  • Col18a1
  • Col19a1
  • Col1a1
  • Col1a2
  • Col20a1
  • Col22a1
  • Col23a1
  • Col25a1
  • Col26a1
  • Col28a1
  • Col2a1
  • Col3a1
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • Col4a6
  • Col5a1
  • Col5a2
  • Col5a3
  • Col7a1
  • Col8a1
  • Col8a2
  • LOC100909752
  • LOC100911572
  • LOC687064
  • RGD1564680
Rattus norvegicus (Norway rat)
Trafficking and processing of endosomal TLR
  • Cnpy3
  • Cts7l2
  • Ctsb
  • Ctsk
  • Ctsl
  • Ctsl1
  • Ctsll3
  • Ctss
  • Grp94
  • Hsp90b1
  • Hspc4
  • Lgmn
  • Prsc1
  • RGD1308751
  • Tlr7
  • Tlr8
  • Tlr9
  • Tra1
  • Unc93b1
Rattus norvegicus (Norway rat)
Class A/1 (Rhodopsin-like receptors)
  • Cmklr1
  • Cnr1
  • Cnr2
  • Dez
  • Ebi2
  • Gpbar1
  • Gpr109
  • Gpr109a
  • Gpr109b
  • Gpr132
  • Gpr18
  • Gpr183
  • Gpr35
  • Gpr39
  • Gpr4
  • Gpr55
  • Gpr65
  • Gpr68
  • Gpr80
  • Gpr91
  • Hcar2
  • Mt2
  • Mtnr1b
  • Niacr1
  • Oxgr1
  • P2y15
  • Ptafr
  • Pumag
  • Skr6
  • Sucnr1
  • Tgr5
Rattus norvegicus (Norway rat)
Sialic acid metabolism
  • Cmas
  • Ctsa
  • Glb1
  • Glcne
  • Gne
  • Hdhd4
  • Nanp
  • Nans
  • Neu1
  • Neu2
  • Neu3
  • Neu4
  • Npl
  • Siat1
  • Siat10
  • Siat4b
  • Siat4c
  • Siat5
  • Siat6
  • Siat7c
  • Siat8b
  • Siat8e
  • Siat9
  • Slc35a1
  • St3gal1
  • St3gal2
  • St3gal3
  • St3gal4
  • St3gal5
  • St3gal6
  • St6gal1
  • St6gal2
  • St6galnac1
  • St6galnac2
  • St6galnac3
  • St6galnac4
  • St6galnac5
  • St6galnac6
  • St8sia1
  • St8sia2
  • St8sia3
  • St8sia4
  • St8sia5
  • St8siav
  • Stx
  • siat7B
Rattus norvegicus (Norway rat)
Activation of Matrix Metalloproteinases
  • Cma1
  • Col18a1
  • Ctrb
  • Ctrb1
  • Ctsg
  • Ctsk
  • Ctsl
  • Ctsl1
  • ENSRNOG00000066972
  • ENSRNOG00000067174
  • ENSRNOG00000069479
  • ENSRNOG00000071144
  • Elane
  • Fur
  • Furin
  • Klk-1
  • Klk-10
  • Klk-12
  • Klk-2
  • Klk-7
  • Klk-8
  • Klk-9
  • Klk1
  • Klk10
  • Klk12
  • Klk1c4
  • Klk1c6
  • Klk2
  • Klk3
  • Klk6
  • Klk7
  • Klk8
  • Klk9
  • Klkb1
  • Klks3
  • LOC100365995
  • LOC102554637
  • LOC683849
  • Mcp6
  • Mcpt3
  • Mcpt6
  • Mmp-7
  • Mmp1
  • Mmp10
  • Mmp11
  • Mmp13
  • Mmp14
  • Mmp15
  • Mmp16
  • Mmp17
  • Mmp1a
  • Mmp2
  • Mmp24
  • Mmp25
  • Mmp3
  • Mmp7
  • Mmp8
  • Mmp9
  • Mt5mmp
  • Mtmmp
  • Ngfg
  • Pcsk3
  • Pk
  • Plg
  • Prss1
  • Prss2
  • Prss2l1
  • Prss3
  • Spock3
  • Timp-1
  • Timp-2
  • Timp1
  • Timp2
  • Ton
  • Tpsb2
  • Trp1
  • Try1
  • Try10
  • Try2
  • Try4
  • Try5
  • Tryp1
Rattus norvegicus (Norway rat)
Dectin-2 family
  • Clec4d
  • Clec4e
  • Clecsf8
  • Clecsf9
  • Fce1g
  • Fcer1g
  • Fyn
  • Lyn
  • Mcl
  • Mincle
  • Plcg2
  • Syk
Rattus norvegicus (Norway rat)
IL-6-type cytokine receptor ligand interactions
  • Clcf1
  • Cntf
  • Cntfr
  • Crlf1
  • Ctf1
  • Il11
  • Il11ra1
  • Il31
  • Il31ra
  • Il6st
  • Jak1
  • Jak2
  • Lif
  • Lifr
  • Osm
  • Osmr
  • Osmrb
  • Tyk2
Rattus norvegicus (Norway rat)
RAF-independent MAPK1/3 activation
  • Cl100
  • Dusp1
  • Dusp10
  • Dusp16
  • Dusp4
  • Dusp5
  • Dusp6
  • Dusp7
  • Dusp8
  • Dusp9
  • ENSRNOG00000069024
  • Erk1
  • Erk2
  • Mapk
  • Mapk1
  • Mapk3
  • Mkp1
  • Mkp2
  • Mkp3
  • Mkpx
  • Pea15
  • Prkm1
  • Prkm3
  • Ptpn16
Rattus norvegicus (Norway rat)
Voltage gated Potassium channels
  • Ckbeta2
  • Ckbeta3
  • Eag
  • Eag2
  • Elk1
  • Elk2
  • Elk3
  • Erg
  • Erg2
  • Erg3
  • Kcna1
  • Kcna10
  • Kcna2
  • Kcna3
  • Kcna4
  • Kcna5
  • Kcna6
  • Kcna7
  • Kcna9
  • Kcnab1
  • Kcnab2
  • Kcnab3
  • Kcnb1
  • Kcnb2
  • Kcnb3
  • Kcnc1
  • Kcnc2
  • Kcnc3
  • Kcnc4
  • Kcnd1
  • Kcnd2
  • Kcnd3
  • Kcnf1
  • Kcng1
  • Kcng2
  • Kcng3
  • Kcng4
  • Kcnh1
  • Kcnh2
  • Kcnh3
  • Kcnh4
  • Kcnh5
  • Kcnh6
  • Kcnh7
  • Kcnh8
  • Kcnq1
  • Kcnq5
  • Kcns1
  • Kcns2
  • Kcns3
  • Kcnv1
  • Kcnv2
  • Kvb1
  • Kvlqt1
Rattus norvegicus (Norway rat)
Condensation of Prometaphase Chromosomes
  • Ck2n
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Ncapd2
  • Ncapg
  • Ncaph
  • Smc2
  • Smc4
Rattus norvegicus (Norway rat)
WNT mediated activation of DVL
  • Ck1e-2
  • Ck2n
  • Csnk1e
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Dvl1
  • Dvl2
  • Dvl3
  • LOC100361515
  • Pip5k1b
Rattus norvegicus (Norway rat)
Regulation of IFNG signaling
  • Cish3
  • Ifng
  • Ifngr1
  • Ifngr2
  • Jak1
  • Jak2
  • Pias1
  • Ptpn2
  • Socs1
  • Socs3
  • Stat1
  • Stat4
  • Sumo1
Rattus norvegicus (Norway rat)
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
  • Cilp
  • Igf-1
  • Igf-2
  • Igf1
  • Igf1r
  • Igf2
Rattus norvegicus (Norway rat)
RIP-mediated NFkB activation via ZBP1
  • Chuk
  • Dhx9
  • Ikba
  • Ikbb
  • Ikbkb
  • Ikbkg
  • Ikkb
  • Myd88
  • Nemo
  • Nfkb2
  • Nfkbia
  • Nfkbib
  • Nkiras1
  • Nkiras2
  • Rela
Rattus norvegicus (Norway rat)
Reactions specific to the complex N-glycan synthesis pathway
  • Chst10
  • Fuca
  • Fuca1
  • Fut8
  • Gnt2
  • Man2a1
  • Man2a2
  • Mana2
  • Mgat2
Rattus norvegicus (Norway rat)
Muscarinic acetylcholine receptors
  • Chrm-1
  • Chrm-2
  • Chrm-3
  • Chrm-4
  • Chrm-5
  • Chrm1
  • Chrm2
  • Chrm3
  • Chrm4
  • Chrm5
Rattus norvegicus (Norway rat)
Endosomal Sorting Complex Required For Transport (ESCRT)
  • Chmp2a
  • Chmp2b
  • Chmp3
  • Chmp4b
  • Chmp4c
  • Chmp5
  • Chmp6
  • Chmp7
  • Eap20
  • Eap30
  • Eap45
  • Fam125a
  • Hgs
  • Hrs
  • Hrs2
  • LOC100360645
  • Mvb12a
  • Mvb12b
  • NEWGENE_1309258
  • Rps27a
  • Snf8
  • Stam
  • Stam2
  • Tsg101
  • Uba80
  • Ubap1
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vps24
  • Vps25
  • Vps28
  • Vps36
  • Vps37b
  • Vps37c
  • Vps37d
  • Vps4a
  • Vps4b
  • Vta1
  • vps4-A
Rattus norvegicus (Norway rat)
RAB geranylgeranylation
  • Chm
  • Chml
  • Ggta
  • Ggtb
  • Prl2
  • Ptp4a2
  • Rab1
  • Rab10
  • Rab11
  • Rab11a
  • Rab11b
  • Rab12
  • Rab13
  • Rab14
  • Rab15
  • Rab16
  • Rab17
  • Rab18
  • Rab19
  • Rab1A
  • Rab1b
  • Rab2
  • Rab20
  • Rab21
  • Rab22a
  • Rab23
  • Rab26
  • Rab27
  • Rab27a
  • Rab27b
  • Rab29
  • Rab2a
  • Rab2b
  • Rab30
  • Rab31
  • Rab33a
  • Rab33b
  • Rab34
  • Rab35
  • Rab36
  • Rab37
  • Rab38
  • Rab39a
  • Rab3a
  • Rab3b
  • Rab3c
  • Rab3d
  • Rab4
  • Rab40b
  • Rab40c
  • Rab43
  • Rab44
  • Rab4a
  • Rab4b
  • Rab5a
  • Rab5b
  • Rab5c
  • Rab6
  • Rab6a
  • Rab6b
  • Rab7
  • Rab7a
  • Rab7b
  • Rab7l1
  • Rab8
  • Rab8a
  • Rab8b
  • Rab9
  • Rab9a
  • Rab9b
  • Rabggta
  • Rabggtb
  • Rep1
Rattus norvegicus (Norway rat)

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