GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 251 - 275 of 1070 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
Beta oxidation of butanoyl-CoA to acetyl-CoA
  • Acads
  • Echs1
  • Had
  • Hadh
  • Hadhsc
  • Schad
Rattus norvegicus (Norway rat)
Beta oxidation of hexanoyl-CoA to butanoyl-CoA
  • Acads
  • Echs1
  • Had
  • Hadh
  • Hadha
  • Hadhb
  • Hadhsc
  • Schad
Rattus norvegicus (Norway rat)
Beta oxidation of octanoyl-CoA to hexanoyl-CoA
  • Acadm
  • Echs1
  • Had
  • Hadh
  • Hadha
  • Hadhb
  • Hadhsc
  • Schad
Rattus norvegicus (Norway rat)
Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA
  • Acadl
  • Echs1
  • Had
  • Hadh
  • Hadha
  • Hadhb
  • Hadhsc
  • Schad
Rattus norvegicus (Norway rat)
Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA
  • Acadm
  • Echs1
  • Had
  • Hadh
  • Hadha
  • Hadhb
  • Hadhsc
  • Mecr
  • Nrbf1
  • Schad
Rattus norvegicus (Norway rat)
Cellular response to hypoxia
  • Epas1
  • Hif1a
  • Hif1an
  • Hif2a
Rattus norvegicus (Norway rat)
Interleukin-4 and Interleukin-13 signaling
  • Grp94
  • Hsp90b1
  • Hspc4
  • Il-13
  • Il-4
  • Il13
  • Il13ra1
  • Il13ra1-ps1
  • Il13ra2
  • Il4
  • Il4r
  • Il4ra
  • Jak1
  • Jak2
  • Jak3
  • LOC100360218
  • Socs1
  • Socs5
  • Stat1
  • Stat3
  • Stat4
  • Stat6
  • Tra1
  • Tyk2
Rattus norvegicus (Norway rat)
Insulin processing
  • Ero1b
  • Exo70
  • Exo84
  • Exoc1
  • Exoc2
  • Exoc3
  • Exoc4
  • Exoc5
  • Exoc6
  • Exoc7
  • Exoc8
  • Ins-1
  • Ins1
  • P4hb
  • Pdia1
  • Sec10l1
  • Sec15
  • Sec15a
  • Sec15l1
  • Sec5
  • Sec5l1
  • Sec6
  • Sec6l1
  • Sec8
  • Sec8l1
  • Slc30a5
  • Slc30a8
  • Znt8
Rattus norvegicus (Norway rat)
Peptide chain elongation
  • Eef2
Rattus norvegicus (Norway rat)
Eukaryotic Translation Elongation
  • Eef1a
  • Eef1a1
  • Eef1b2
  • Eef1d
  • Eef1g
Rattus norvegicus (Norway rat)
Elastic fibre formation
  • Dance
  • Eln
  • Fbln5
  • Fbn1
  • Fur
  • Furin
  • Itga5
  • Itgav
  • Itgb1
  • Itgb3
  • Itgb6
  • Lox
  • Loxl1
  • Loxl2
  • Loxl3
  • Loxl4
  • Mfap2
  • Mfap5
  • Pcsk3
Rattus norvegicus (Norway rat)
Vitamin B2 (riboflavin) metabolism
  • AABR07053065.1
  • Acp5
  • Enpp1
  • Flad1
  • Gpr172a
  • Gpr172b
  • Npps
  • Pc1
  • Pdnp1
  • Rfk
  • Rft1
  • Rft2
  • Slc52a2
  • Slc52a3
Rattus norvegicus (Norway rat)
Phosphate bond hydrolysis by NTPDase proteins
  • Cd39
  • Cd39l1
  • Cd39l2
  • Entpd1
  • Entpd2
  • Entpd3
  • Entpd4
  • Entpd5
  • Entpd6
  • Entpd7
  • Entpd8
Rattus norvegicus (Norway rat)
Toll Like Receptor 9 (TLR9) Cascade
  • Eea1
  • Pik3c3
  • Pik3r4
  • Rbsn
  • Tlr9
  • Vps34
  • Zfyve20
Rattus norvegicus (Norway rat)
EPH-Ephrin signaling
  • Efna1
  • Efna2
  • Efna3
  • Efna4
  • Efna5
  • Efnb1
  • Efnb3
  • Ehk-1
  • Ehk-2
  • Ehk-3
  • Ehk2
  • Ehk3
  • Ekh1
  • Elk
  • Epgl1
  • Epha1
  • Epha10
  • Epha2
  • Epha3
  • Epha4
  • Epha5
  • Epha6
  • Epha7
  • Ephb1
  • Ephb2
  • Ephb3
  • Ephb4
  • Ephb6
  • Eplg2
  • Eplg7
  • Epth2
  • LOC686310
  • Lerk1
  • Lerk2
  • Lerk7
  • Rek4
  • Rek7
  • Tyro4
Rattus norvegicus (Norway rat)
TNFs bind their physiological receptors
  • Cd30
  • Eda
  • Eda2r
  • Edar
  • Edaradd
  • Lta
  • Opg
  • Opgl
  • Ox40
  • Ox40l
  • Rankl
  • Tl1
  • Tnfb
  • Tnfr-1
  • Tnfr1
  • Tnfr2
  • Tnfrsf11b
  • Tnfrsf13b
  • Tnfrsf14
  • Tnfrsf17
  • Tnfrsf18
  • Tnfrsf1a
  • Tnfrsf1b
  • Tnfrsf25
  • Tnfrsf4
  • Tnfrsf8
  • Tnfrsf9
  • Tnfsf1
  • Tnfsf11
  • Tnfsf13
  • Tnfsf13b
  • Tnfsf15
  • Tnfsf18
  • Tnfsf4
  • Tnfsf8
  • Tnfsf9
  • Tnlg3a
  • Tnlg5a
  • Trance
  • Txgp1
  • Txgp1l
  • Vegi
Rattus norvegicus (Norway rat)
Downregulation of SMAD2/3:SMAD4 transcriptional activity
  • Adprt
  • Atp1b4
  • Erk1
  • Erk2
  • Hdac1
  • LOC100360645
  • Madh2
  • Madh3
  • Madh4
  • Mapk
  • Mapk1
  • Mapk3
  • Ncor2
  • Nedd4l
  • Parp1
  • Pp2c1
  • Ppm1a
  • Pppm1a
  • Prkm1
  • Prkm3
  • Rps27a
  • Ski
  • Skil
  • Smad2
  • Smad3
  • Smad4
  • Smurf2
  • Snw1
  • Tgif1
  • Trim33
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ube2d1
  • Ube2d3
Rattus norvegicus (Norway rat)
Downregulation of ERBB2:ERBB3 signaling
  • Akt1
  • Akt2
  • Akt3
  • Erbb2
  • Erbb3
  • LOC100360645
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Ntak
  • Rnf41
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Usp8
Rattus norvegicus (Norway rat)
Interleukin-6 signaling
  • Cbl
  • Cish3
  • Il-6
  • Il6
  • Il6r
  • Il6ra
  • Il6st
  • Jak1
  • Jak2
  • Ptpn11
  • Socs3
  • Stat1
  • Stat3
  • Stat4
  • Tyk2
Rattus norvegicus (Norway rat)
Spry regulation of FGF signaling
  • Ash
  • Braf
  • Cbl
  • Erk1
  • Erk2
  • Grb2
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Mknk1
  • Mnk1
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Spry2
  • Src
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Regulation of KIT signaling
  • Aps
  • Ash
  • Cbl
  • Fyn
  • Grb2
  • KIT
  • Kit
  • Kitl
  • Kitlg
  • Lck
  • Lyn
  • Mgf
  • Pkca
  • Prkca
  • Ptph6
  • Ptpn6
  • Sh2b2
  • Sos1
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
TGF-beta receptor signaling activates SMADs
  • Cbl
  • Fkbp1
  • Fkbp1a
  • Fur
  • Furin
  • Itga8
  • Itgav
  • Itgb1
  • Itgb3
  • Itgb5
  • Itgb6
  • Itgb8
  • Ltbp1
  • Ltbp2
  • Ltbp3
  • Ltbp4
  • Madh2
  • Madh3
  • Madh4
  • Nedd8
  • Pcsk3
  • Smad2
  • Smad3
  • Smad4
  • Tgf-b3
  • Tgfb1
  • Tgfb2
  • Tgfb3
  • Tgfbr1
  • Tgfbr2
  • Tgfbr3
  • Ube2m
  • Zfyve9
Rattus norvegicus (Norway rat)
Negative regulation of FGFR4 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF15
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-9
  • Fgf1
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf19
  • Fgf2
  • Fgf20
  • Fgf23
  • Fgf4
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf8a
  • Fgf9
  • Fgfa
  • Fgfr4
  • Frs2
  • Grb2
  • Klb
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Negative regulation of FGFR3 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf2
  • Fgf20
  • Fgf23
  • Fgf4
  • Fgf5
  • Fgf7a
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr3
  • Frs2
  • Grb2
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Negative regulation of FGFR1 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf17
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr1
  • Flg
  • Frs2
  • Grb2
  • Kl
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024