GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **276 - 300** of **1070** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol	Organism ▲	GlyTouCan ID
RHOBTB2 GTPase cycle	Actin, cytoplasmic 2 Alpha-actinin-1 Cullin-3 Heat shock protein HSP 90-alpha Heat shock protein HSP 90-beta Heterogeneous nuclear ribonucleoprotein C Hsp90 co-chaperone Cdc37 Musashi RNA-binding protein 2 Pleckstrin homology domain interacting protein RNA-binding motif protein, X chromosome Rho-related BTB domain containing 2 Serine and arginine repetitive matrix 1 Serine/threonine kinase 38 Spliceosome RNA helicase Ddx39b T-complex protein 1 subunit beta T-complex protein 1 subunit eta T-complex protein 1 subunit zeta Thioredoxin-like protein 1 Transformer-2 protein homolog beta Tropomodulin 3 Twinfilin-1 Unconventional myosin-VI	A0A8I5ZV38 A0A8I6ACM8 A0A8I6AQW7 A0A8I6AR12 B5DF89 F1M3B3 F7ELS2 F7F0R0 G3V9Q4 G3V9R8 P34058 P62997 P63259 P82995 Q4V898 Q5BJV7 Q5RJR2 Q5XIM9 Q63413 Q63692 Q920J4 Q9Z1P2	Actg Actg1 Actn1 Bat1 Bat1a Cct2 Cct6a Cct7 Cctb Cdc37 Cul3 Ddx39b Hnrnpc Hnrpc Hsp84 Hsp86 Hsp90aa1 Hsp90ab1 Hspc3 Hspca Hspcb Msi2 Myo6 Phip Ptk9 Rbmx Rbmxrt Rhobtb2 Sfrs10 Srrm1 Stk38 Tmod3 Tra2b Trp Twf1 Txnl1 Uap56	Rattus norvegicus (Norway rat)
Synthesis of 15-eicosatetraenoic acid derivatives	Glutathione peroxidase 1 Glutathione peroxidase 2 Phospholipid hydroperoxide glutathione peroxidase Polyunsaturated fatty acid lipoxygenase ALOX15 Polyunsaturated fatty acid lipoxygenase ALOX15B Prostaglandin G/H synthase 2	P04041 P35355 P36970 P83645 Q02759 Q8K4F2	Alox12l Alox15 Alox15b Cox-2 Cox2 Gpx1 Gpx2 Gpx4 Ptgs2	Rattus norvegicus (Norway rat)
Signal regulatory protein family interactions	FYN-binding protein 1 Growth factor receptor-bound protein 2 Ig-like domain-containing protein Leukocyte surface antigen CD47 Protein-tyrosine kinase 2-beta Signal-regulatory protein alpha like 1 Signal-regulatory protein beta 2 Src kinase-associated phosphoprotein 2 TYRO protein tyrosine kinase-binding protein Tyrosine-protein phosphatase non-receptor type substrate 1-like Tyrosine-protein phosphatase non-receptor type substrate 1-like Tyrosine-protein phosphatase non-receptor type substrate 1	A0A0G2K068 A0A8I6GMF6 D3ZIE4 F1LW33 F1LY66 M0RAK5 P62994 P70600 P97710 P97829 Q6X9T7 Q920G0	AABR07008876.1 Ash Bit Cd47 Dap12 Fak2 Fyb Fyb1 Grb2 LOC100909964 Mfr Ptk2b Ptpns1 Pyk2 Scap2 Shps1 Sirp Sirpa Sirpal1 Sirpb2 Sirpd Skap2 Skap55r Tyrobp	Rattus norvegicus (Norway rat)
Glycerophospholipid catabolism	Glycerophosphocholine cholinephosphodiesterase ENPP6 Glycerophosphodiester phosphodiesterase 1 Patatin-like phospholipase domain containing 6	B0BND0 M0R715 Q9JL55	Enpp6 Gde1 Mir16 Pnpla6	Rattus norvegicus (Norway rat)
EPH-Ephrin signaling	EPH receptor A10 Ephrin A2 Ephrin A3 Ephrin A4 Ephrin B3 Ephrin type-A receptor 3 Ephrin type-A receptor 5 Ephrin type-A receptor 6 Ephrin type-A receptor 7 Ephrin type-B receptor 1 Ephrin type-B receptor 3 Ephrin type-B receptor 6 Ephrin-A1 Ephrin-A5 Ephrin-B1 receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase receptor protein-tyrosine kinase	A0A0G2JV56 D3ZBN3 D3ZDH4 D3ZEN1 D3ZH39 D3ZZK3 F1LX55 F1MA19 F1MAJ0 G3V7D4 M0RDA4 O08680 P09759 P0C0K7 P52796 P54757 P54758 P54759 P97553 P97605	Efna1 Efna2 Efna3 Efna4 Efna5 Efnb1 Efnb3 Ehk-1 Ehk-2 Ehk-3 Ehk2 Ehk3 Ekh1 Elk Epgl1 Epha1 Epha10 Epha2 Epha3 Epha4 Epha5 Epha6 Epha7 Ephb1 Ephb2 Ephb3 Ephb4 Ephb6 Eplg2 Eplg7 Epth2 LOC686310 Lerk1 Lerk2 Lerk7 Rek4 Rek7 Tyro4	Rattus norvegicus (Norway rat)
Transfer of LPS from LBP carrier to CD14	Lipopolysaccharide-binding protein Monocyte differentiation antigen CD14	Q63313 Q63691	Cd14 Lbp	Rattus norvegicus (Norway rat)
RAC2 GTPase cycle	ARF GTPase-activating protein GIT1 ARF GTPase-activating protein GIT2 Abl interactor 1 Abl-interactor 2 Active breakpoint cluster region-related protein Ankyrin repeat and LEM domain-containing protein 2 Armadillo repeat-containing X-linked protein 3 BAR/IMD domain-containing adapter protein 2-like 1 BRICK1 subunit of SCAR/WAVE actin nucleating complex Breakpoint cluster region protein CDC42 effector protein 4 Caveolin-1 Cdc42 effector protein 1 Cell division control protein 42 homolog Cell surface glycoprotein MUC18 Cytochrome b-245 heavy chain Cytochrome b-245 light chain Cytoplasmic FMR1-interacting protein DEF6 guanine nucleotide exchange factor DEP domain containing 1B Dedicator of cyto-kinesis 3 Dedicator of cytokinesis 10 Dedicator of cytokinesis 2 Dedicator of cytokinesis 4 Delta(14)-sterol reductase LBR Desmoglein 2 Emerin Extended synaptotagmin-1 Granule associated Rac and RHOG effector 1 IQ motif containing GTPase activating protein 1 Integrin beta-1 MAGUK p55 subfamily member 7 MCF.2 cell line derived transforming sequence Membrane-associated progesterone receptor component 2 Metaxin-1 NCK associated protein 1 like NHS actin remodeling regulator Nck-associated protein 1 Neutrophil cytosol factor 2 Neutrophil cytosolic factor 1 Neutrophil cytosolic factor 4 Oligophrenin-1 Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol 3-kinase regulatory subunit gamma Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform Phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 Phospholipase D2 Protein ERGIC-53 Protein diaphanous homolog 3 Proto-oncogene vav RNA binding motif protein 39 Rac GTPase-activating protein 1 Rac family small GTPase 2 Ragulator complex protein LAMTOR1 Ras-related protein Rab-7a Rho GDP-dissociation inhibitor 1 Rho GTPase activating protein 1 Rho GTPase activating protein 21 Rho GTPase activating protein 32 Rho GTPase activating protein 42 Rho GTPase-activating protein 17 Rho GTPase-activating protein 26 Rho GTPase-activating protein 35 Rho GTPase-activating protein SYDE1 SLIT and NTRK-like family, member 5 Serine/threonine-protein kinase PAK 1 Serine/threonine-protein kinase PAK 2 Serine/threonine-protein kinase TAO3 Sorting and assembly machinery component 50 homolog Starch-binding domain-containing protein 1 Switching B-cell complex subunit SWAP70 TIAM Rac1 associated GEF 1 Transferrin receptor protein 1 Triple functional domain protein Vang-like protein Vav guanine nucleotide exchange factor 2 Vav guanine nucleotide exchange factor 3 Vesicle-associated membrane protein 3 Vesicle-associated membrane protein-associated protein B Wiskott-Aldrich syndrome protein family member non-specific serine/threonine protein kinase non-specific serine/threonine protein kinase receptor protein-tyrosine kinase	A0A0G2JTR4 A0A0G2JU49 A0A0G2JVP1 A0A0G2JXJ0 A0A0G2JYR5 A0A0G2K344 A0A8I5ZLD3 A0A8I5ZNF3 A0A8I5ZNR8 A0A8I5ZPB5 A0A8I5ZRT6 A0A8I5ZS98 A0A8I6A1P8 A0A8I6A9Q4 A0A8I6AC12 A0A8I6ADN8 A0A8I6AEP6 A0A8I6AG90 A0A8I6AH32 A0A8I6APL5 A0A8I6APV4 A0A8I6GDA1 A0A8I6GLR6 A0A8J8XFB5 A0A8J8XIU8 A1A5P0 A7E3N2 B1WC33 B5DF62 D3ZBN3 D3ZCK4 D3ZKC8 D3ZRE7 D3ZUP5 D3ZYG0 D3ZZN9 D4A8H8 D4AA32 F1LVW7 F1LXF1 F1M0Z1 F1M4N6 F1M707 F1MAK3 G3V7Q7 M0R9U3 P09527 P0CAX5 P35465 P41350 P49134 P54100 P55161 P63025 P70498 P81128 Q3KR97 Q53UA7 Q5FVN1 Q5FWU0 Q5U2Y3 Q5XI73 Q5XID7 Q5XIU9 Q62737 Q62902 Q63190 Q63787 Q63788 Q63789 Q64303 Q66H91 Q6AXV4 Q6P791 Q7TP65 Q8CFN2 Q99376 Q99N37 Q9EPF2 Q9ERL1 Q9QZM5 Q9Z1X1 Q9Z269 Q9Z272	AABR07021955.1 Abi1 Abi2 Abr Ankle2 Arg357 Arhgap1 Arhgap17 Arhgap21 Arhgap26 Arhgap32 Arhgap35 Arhgap42 Arhgdia Armcx3 Baiap2l1 Bcr Borg5 Brk1 Cav Cav1 Cdc42 Cdc42ep1 Cdc42ep4 Cyba Cybb Cyfip1 Def6 Depdc1b Diaph3 Dock10 Dock2 Dock3 Dock4 Dsg2 Emd Epha2 Ergic53 Esyt1 Fam62a Garre1 Git1 Git2 Grlf1 Hem2 Iqgap1 Itgb1 Jik Lamtor1 Lbr Lem4 Lman1 Mbc2 Mcam Mcf2 Mpp7 Mtx1 Muc18 Nap1 Ncf1 Ncf2 Ncf4 Nckap1 Nckap1l Nhs Ophn1 P190A Pak1 Pak2 Pak4 Pgrmc2 Pik3ca Pik3r1 Pik3r2 Pik3r3 Pld2 Prex1 Rab7 Rab7a Rac2 Racgap1 Rbm39 Samm50 Slitrk5 Stbd1 Swap70 Syb3 Syde1 Taok3 Tfrc Tiam1 Trfr Trio Vamp3 Vangl1 Vapb Vav Vav1 Vav2 Vav3 Vrk2 Wasf2 p190ARHOGAP	Rattus norvegicus (Norway rat)
Opioid Signalling	Mu-type opioid receptor Pro-opiomelanocortin Proenkephalin-B	P01194 P06300 P33535	Oprm1 Pdyn Pomc Pomc2 Ror-b	Rattus norvegicus (Norway rat)
Cholesterol biosynthesis	3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-keto-steroid reductase/17-beta-hydroxysteroid dehydrogenase 7 Acetyl-CoA acetyltransferase, cytosolic Delta(14)-sterol reductase LBR Delta(24)-sterol reductase Diphosphomevalonate decarboxylase Farnesyl pyrophosphate synthase Geranylgeranyl pyrophosphate synthase Hydroxymethylglutaryl-CoA synthase, cytoplasmic Isopentenyl-diphosphate Delta-isomerase 1 Lanosterol 14-alpha demethylase Lanosterol synthase Methylsterol monooxygenase 1 Mevalonate kinase Phosphomevalonate kinase Polyisoprenoid diphosphate/phosphate phosphohydrolase PLPP6 Protein ARV Squalene monooxygenase Squalene synthase Sterol regulatory element-binding protein 1 Sterol regulatory element-binding protein 2 Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isopentenyl-diphosphate Delta-isomerase	A0A8I6AEP6 D3ZTJ1 D3ZVY0 O35532 O35760 P05369 P17256 P17425 P48450 P51639 P52020 P56720 Q02769 Q3T1I5 Q5BQE6 Q5PPL3 Q5RK24 Q5XI22 Q62904 Q62967 Q64654 Q66H88 Q6F596	AABR07021955.1 Acat2 Arv1 Cyp51 Cyp51a1 Dhcr24 Erg1 Fdft1 Fdps Ggps1 Hmgcr Hmgcs Hmgcs1 Hsd17b7 Idi1 Idi2l3 Lbr Lss Mpd Msmo1 Mvd Mvk Nsdhl Osc Plpp6 Pmvk RGD1564999 Sc4mol Sqle Srebf1 Srebf2 Srebp1	Rattus norvegicus (Norway rat)
Deactivation of the beta-catenin transactivating complex	14-3-3 protein zeta/delta Adenomatous polyposis coli protein Beta-transducin repeat containing E3 ubiquitin protein ligase C-terminal-binding protein 1 Catenin beta-1 Catenin, beta-interacting protein 1 Chromodomain-helicase-DNA-binding protein 8 E3 ubiquitin-protein ligase XIAP Exportin-1 Histone deacetylase 1 Lymphoid enhancer-binding factor 1 Polyubiquitin-B Polyubiquitin-C Protein chibby homolog 1 RAC-alpha serine/threonine-protein kinase RAC-beta serine/threonine-protein kinase SRY-box transcription factor 13 SRY-box transcription factor 17 SRY-box transcription factor 2 SRY-box transcription factor 3 SRY-box transcription factor 7 TLE family member 1, transcriptional corepressor TLE family member 2, transcriptional corepressor Transcription factor 7 like 1 Transcription factor 7 like 2 Transcription factor 7 Transcription factor SOX-6 Transcription factor SOX-9 Transcription factor SOX Transducin-like enhancer protein 3 Transducin-like enhancer protein 4 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JTZ2 A0A0G2K109 A0A8I5Y0T5 A0A8I5ZLY3 A0A8I5ZM42 A0A8I5ZQY6 A0A8I5ZT78 A0A8I6A5Y3 A0A8I6A9A2 A0A8I6AT29 A0A8I6G2R1 D3ZTE1 D4A543 D4A8S0 F1LYL9 G3V923 P0CG51 P47196 P47197 P62982 P63102 P70478 Q07141 Q4QQW4 Q63429 Q80U96 Q8K4I6 Q9JIT3 Q9JIX5 Q9QXN1 Q9R0I6 Q9WU82 Q9Z2F5	Akt1 Akt2 Apc Api3 Bars Birc4 Btrc Catnb Cby Cby1 Chd8 Crm1 Ctbp1 Ctbp3 Ctnnb1 Ctnnbip1 Esp2 Esp3 Grg4 Hdac1 LOC100360645 Lef1 Msfs1 Pgea1 Rps27a Sox-6 Sox13 Sox17 Sox2 Sox3 Sox4 Sox6 Sox7 Sox9 Tcf7 Tcf7l1 Tcf7l2 Tle1 Tle2 Tle3 Tle4 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Xiap Xpo1 Ywhaz	Rattus norvegicus (Norway rat)
PKA activation	Adenylate cyclase type 1 Adenylate cyclase type 2 Adenylate cyclase type 3 Adenylate cyclase type 4 Adenylate cyclase type 5 Adenylate cyclase type 6 Adenylate cyclase type 7 Adenylate cyclase type 8 Calmodulin-3 adenylate cyclase cAMP-dependent protein kinase catalytic subunit alpha cAMP-dependent protein kinase catalytic subunit beta cAMP-dependent protein kinase type I-alpha regulatory subunit cAMP-dependent protein kinase type I-beta regulatory subunit cAMP-dependent protein kinase type II-alpha regulatory subunit cAMP-dependent protein kinase type II-beta regulatory subunit	D4A3N4 F1LQT1 M0R5U4 P09456 P0DP31 P12368 P12369 P21932 P26769 P26770 P27791 P40146 P68182 P81377 Q03343 Q04400	Adcy1 Adcy2 Adcy3 Adcy4 Adcy5 Adcy6 Adcy7 Adcy8 Adcy9 CaMIII Calm3 Cam3 Camc Pkacb Prkaca Prkacb Prkar1a Prkar1b Prkar2a Prkar2b	Rattus norvegicus (Norway rat)
p53-Dependent G1 DNA Damage Response	Cyclin E2 Cyclin-A1 Cyclin-A2 Cyclin-dependent kinase 2 Cyclin-dependent kinase inhibitor 1A Cyclin-dependent kinase inhibitor 1B G1/S-specific cyclin-E1	A0A0G2JVY9 A0A8I5ZZ18 D3ZQ41 O08769 P39949 Q63699 Q6AY13	Ccna1 Ccna2 Ccne Ccne1 Ccne2 Cdk2 Cdkn1a Cdkn1b Cdkn2 p27Kip1	Rattus norvegicus (Norway rat)
Apoptosis induced DNA fragmentation	Caspase-3 DNA fragmentation factor subunit alpha DNA fragmentation factor subunit beta H1.2 linker histone, cluster member High mobility group protein B1 High mobility group protein B1 High mobility group protein B1 High mobility group protein B1 High mobility group protein B2 Histone H1.0 Histone H1.1 Histone H1.4 Histone H1.5 Importin subunit alpha-5 Importin subunit beta-1	A0A0G2K654 A0A0G2K6P4 A0A8I5Y7D7 A0A8I6ANF5 A0A8I6GBU6 D3ZBN0 D4A3K5 P15865 P43278 P52296 P52925 P55213 P63159 P83953 Q99N34	Cad Casp3 Cpp32 Dffa Dffb H1-0 H1-1 H1-4 H1-5 H1f0 H1f2 H1f4 H1f5 HIf5 Hist1h1a Hist1h1b Hmg-1 Hmg1 Hmg2 Hmgb1 Hmgb1-ps33 Hmgb1-ps4 Hmgb1l1 Hmgb1l2 Hmgb1l3 Hmgb1l5 Hmgb2 Kpna1 Kpnb1 LOC108349189 LOC108350839	Rattus norvegicus (Norway rat)
Heme biosynthesis	5-aminolevulinate synthase, erythroid-specific, mitochondrial 5-aminolevulinate synthase, non-specific, mitochondrial 5-aminolevulinate synthase Albumin Amine oxidase Broad substrate specificity ATP-binding cassette transporter ABCG2 Cytochrome c oxidase assembly homolog COX15 Delta-aminolevulinic acid dehydratase Ferrochelatase Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial Porphobilinogen deaminase Protoheme IX farnesyltransferase, mitochondrial Uroporphyrinogen decarboxylase (Fragment) uroporphyrinogen-III synthase	A0A8I6GEM4 D3ZVN7 D4A414 F1LVF4 F1LVW9 P02770 P06214 P13195 P19356 P32362 Q3B7D0 Q5XIF2 Q63147 Q80W57	Abcg2 Alad Alas1 Alas2 Alase Alb Bcrp1 Cox10 Cox15 Cpo Cpox Fech Hmbs LOC100911779 Ppox Urod Uros	Rattus norvegicus (Norway rat)
Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Cullin 2 Egl nine homolog 1 (Fragment) Elongin-B Elongin-C Endothelial PAS domain-containing protein 1 Hypoxia-inducible factor 1-alpha Hypoxia-inducible factor 3-alpha LIM domain-containing protein 1 LIM domain-containing protein ajuba Polyubiquitin-B Polyubiquitin-C Prolyl hydroxylase EGLN2 Prolyl hydroxylase EGLN3 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14 Proteasome 26S subunit, ATPase 6 Proteasome 26S subunit, non-ATPase 3 Proteasome 26S subunit, non-ATPase 7 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type Proteasome subunit beta type-10 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 Proteasome subunit beta Ring-box 1 Ubiquitin B-like Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-conjugating enzyme E2 D2 Ubiquitin-conjugating enzyme E2 D3 Ubiquitin-ribosomal protein eS31 fusion protein WT1 interacting protein von Hippel-Lindau disease tumor suppressor	A0A0G2JSL0 A0A0G2JUC8 A0A0G2KAX0 A0A8I5ZM79 A0A8I5ZNE7 A0A8I6A5Y3 A0A8I6G8I6 B0BN93 B5DEH0 D3ZDK2 F1LMC1 F1LMQ3 F1LMZ8 F1M6I7 F7FGV7 G3V6W6 G3V8G2 O35800 O88761 P0CG51 P17220 P18420 P18421 P18422 P21670 P28064 P28073 P28075 P28077 P34064 P34067 P40112 P40307 P48004 P59722 P60901 P61078 P62193 P62198 P62839 P62870 P62982 P83941 Q4FZT9 Q4KM35 Q4V8E2 Q5U2Z2 Q5XIC6 Q5XIU5 Q62630 Q63347 Q63429 Q63569 Q63570 Q63797 Q63798 Q64259 Q6AYU4 Q9JHS1 Q9JHS2 Q9JHW0 Q9WTV5 Q9Z2X3	Ajuba Cul2 Egln1 Egln2 Egln3 Elob Eloc Epas1 Hif1a Hif2a Hif3a Jub LOC100360645 LOC100360846 LOC100365869 Limd1 Lmp10 Lmp2 Mecl1 Mss1 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma8 Psmb1 Psmb10 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb6l Psmb6l1 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme4 Psmf1 Rbx1 Ring12 Rps27a Sm20 Sug1 Tbp1 Tbp7 Tceb1 Tceb2 Uba80 Ubb Ubbl1 Ubc Ubc4 Ubcep1 Ubch4 Ubch5b Ubcl1 Ube2d1 Ube2d2 Ube2d3 Vhl Wtip	Rattus norvegicus (Norway rat)
Synthesis of bile acids and bile salts via 27-hydroxycholesterol	25-hydroxycholesterol 7-alpha-hydroxylase (Fragment) 3 beta-hydroxysteroid dehydrogenase type 7 Aldo-keto reductase family 1 member C21 Aldo-keto reductase family 1 member D1 Aldo-keto reductase family 1, member C1 Bile acid receptor Cytochrome P450 7A1 Cytochrome P450 family 8 subfamily B member 1 Nuclear receptor coactivator 2 Nuclear receptor coactivator Prostacyclin synthase Retinoic acid receptor RXR-alpha Sterol 26-hydroxylase, mitochondrial	A0A8I6APA0 G3V8J2 O35048 P17178 P18125 P31210 Q05343 Q3MHS3 Q62735 Q62969 Q63688 Q6AYQ2 Q9WUI9	Akr1c1 Akr1c21 Akr1d1 Bar Cca2 Cyp27 Cyp27a1 Cyp7 Cyp7a1 Cyp7b1 Cyp8 Cyp8b1 Fxr Hsd17b5 Hsd3b7 Ncoa1 Ncoa2 Nr1h4 Nr2b1 Ptgis Rip14 Rxra Tif2	Rattus norvegicus (Norway rat)
SCF-beta-TrCP mediated degradation of Emi1	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Beta-transducin repeat containing E3 ubiquitin protein ligase Cell division cycle protein 20 homolog Cullin 1 Fizzy and cell division cycle 20 related 1 Polyubiquitin-B Polyubiquitin-C Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14 Proteasome 26S subunit, ATPase 6 Proteasome 26S subunit, non-ATPase 3 Proteasome 26S subunit, non-ATPase 7 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type Proteasome subunit beta type-10 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 Proteasome subunit beta S-phase kinase-associated protein 1 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JSL0 A0A0G2KAX0 A0A8I5Y0H0 A0A8I5ZM79 A0A8I5ZNE7 A0A8I6A5Y3 A0A8I6G2R1 B0BN93 B1WCA1 F1LMQ3 F1LMZ8 F1M6I7 F7FGV7 G3V6W6 G3V8G2 O88761 P0CG51 P17220 P18420 P18421 P18422 P21670 P28064 P28073 P28075 P28077 P34064 P34067 P40112 P40307 P48004 P60901 P62193 P62198 P62982 Q4FZT9 Q4KM35 Q4V8E2 Q5XIC6 Q5XIU5 Q62623 Q63347 Q63429 Q63569 Q63570 Q63797 Q63798 Q6PEC4 Q9JHW0 Q9WTV5 Q9Z2X3	Btrc Cdc20 Cul1 Fzr1 LOC100360645 LOC100360846 LOC100365869 Lmp10 Lmp2 Mecl1 Mss1 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma8 Psmb1 Psmb10 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb6l Psmb6l1 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme4 Psmf1 Ring12 Rps27a Skp1 Skp1a Sug1 Tbp1 Tbp7 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1	Rattus norvegicus (Norway rat)
Transport and synthesis of PAPS	3'-phosphoadenosine 5'-phosphosulfate synthase 1 3'-phosphoadenosine 5'-phosphosulfate synthase 2 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 Adenosine 3'-phospho 5'-phosphosulfate transporter 2 Sulfate anion transporter 1 Sulfate transporter	A0A0G2K0L0 A0A0G2K950 D4AAG3 F7FLA1 O70531 P45380	Dtdst Papss1 Papss2 Sat1 Slc26a1 Slc26a2 Slc35b2 Slc35b3	Rattus norvegicus (Norway rat)
Assembly of collagen fibrils and other multimeric structures	Cathepsin B Cathepsin S Collagen alpha-1(I) chain Collagen alpha-1(II) chain Collagen alpha-1(III) chain Collagen alpha-1(V) chain Collagen alpha-1(XI) chain Collagen alpha-2(I) chain Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type IV alpha 5 chain Collagen type V alpha 2 chain Collagen type V alpha 3 chain Collagen type VIII alpha 1 chain Collagen type VIII alpha 2 chain Collagen type X alpha 1 chain Collagen type XI alpha 2 chain Collagen type XV alpha 1 chain Collagen type XVIII alpha 1 chain Collagenase 3 (Fragment) Matrilysin Matrix metallopeptidase 20 Matrix metalloproteinase-9 Procathepsin L Similar to Cathepsin L precursor (Major excreted protein) (MEP) Stromelysin-1	A0A0G2JV12 A0A0G2K069 A0A0G2K742 A0A0G2K7A5 A0A8I5ZZ86 A0A8I6GLR1 D3ZKC3 D3ZXD9 D4AC70 D4ADG9 F1LQ00 F1LRJ1 F1M6Q3 F1MA59 F7EVZ0 P00787 P02454 P02466 P03957 P05539 P07154 P13941 P20909 P23097 P50280 P50282 Q02765 Q9JI03	Col10a1 Col11a1 Col11a2 Col15a1 Col18a1 Col1a1 Col1a2 Col2a1 Col3a1 Col4a1 Col4a2 Col4a3 Col4a4 Col4a5 Col5a1 Col5a2 Col5a3 Col8a1 Col8a2 Cts7l2 Ctsb Ctsl Ctsl1 Ctsll3 Ctss LOC100909752 LOC100911572 Mmp-7 Mmp13 Mmp20 Mmp3 Mmp7 Mmp9 RGD1308751	Rattus norvegicus (Norway rat)
RMTs methylate histone arginines	AT-rich interaction domain 1A AT-rich interaction domain 1B Actin-like 6A Actin-like protein 6B Coordinator of PRMT5 and differentiation stimulator Cyclin-dependent kinase 4 DNA (cytosine-5)-methyltransferase 3A G1/S-specific cyclin-D1 Histone H2A type 2-A Histone H2A type 3 Histone H2A.J Histone H2A Histone H2A Histone H2A Histone H3.1 Histone H3 Histone H4 Histone-arginine methyltransferase CARM1 Histone-binding protein RBBP7 Methylosome protein WDR77 Polybromo 1 Protein arginine N-methyltransferase 1 Protein arginine N-methyltransferase 3 Protein arginine N-methyltransferase 5 Protein arginine N-methyltransferase 7 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS5 Transcription activator BRG1 WD repeat-containing protein 5	A0A0G2JVD3 A0A8I5ZMW9 A0A8I5ZQQ2 A0A8I5ZYY0 A0A8I6A5E1 A0A8I6AJE2 A0A8I6AMA8 A0A8I6AWT3 A0A8J8YH81 A9UMV8 D3ZB92 D3ZBS9 D3ZJ08 D3ZT78 D3ZVK7 D4A0E8 E9PTG1 O54772 O70467 P0CC09 P27952 P35426 P39948 P62804 P86173 Q1LZ53 Q498M4 Q4AE70 Q4FZT6 Q4KM87 Q4QR85 Q56A18 Q5U4E8 Q63009 Q6LED0 Q71UF4 Q8K1P7	AABR07029195.1 Actl6a Actl6b Arid1a Arid1b Baf190a Baf57 Baf60b Brg1 Carm1 Ccnd1 Cdk4 Coprs Dnmt3a ENSRNOG00000062927 H2ac10 H2ac18 H2ac25 H2ac4 H2aj H3c13 H4c16 H4c2 H4f16 H4ft Hist1h4b Hist1h4m Hist2h2aa3 Hist2h3c2 Hist3h2a Hist4 Hist4h4 Hrmt1l2 Hrmt1l3 LOC120097726 Mep50 Pbrm1 Prmt1 Prmt3 Prmt4 Prmt5 Prmt7 RGD1565675 Rbbp7 Rps2 Smarca2 Smarca4 Smarcb1 Smarcc1 Smarcc2 Smarcd1 Smarcd2 Smarcd3 Smarce1 Snf2b Snf2l4 Wdr5 Wdr77	Rattus norvegicus (Norway rat)
APC/C:Cdc20 mediated degradation of Securin	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Anaphase promoting complex subunit 1 Anaphase promoting complex subunit 7 Anaphase-promoting complex subunit 15 Anaphase-promoting complex subunit 16 Anaphase-promoting complex subunit 2 Anaphase-promoting complex subunit 4 Anaphase-promoting complex subunit 5 Anaphase-promoting complex subunit CDC26 Cell division cycle 16 Cell division cycle 23 Cell division cycle protein 20 homolog Cell division cycle protein 27 homolog E2 ubiquitin-conjugating enzyme Polyubiquitin-B Polyubiquitin-C Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14 Proteasome 26S subunit, ATPase 6 Proteasome 26S subunit, non-ATPase 3 Proteasome 26S subunit, non-ATPase 7 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type Proteasome subunit beta type-10 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 Proteasome subunit beta Securin Ubiquitin B-like Ubiquitin-conjugating enzyme E2 C Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-conjugating enzyme E2 S Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JSL0 A0A0G2KAX0 A0A8I5ZM79 A0A8I5ZNE7 A0A8I6A4J8 A0A8I6A5Y3 A0A8I6AE10 A0A8I6ANL9 A1L1K3 B0BN93 B5DFI8 D3ZDK2 D3ZDN9 D3ZIT4 D3ZQX4 D3ZUB7 D3ZUW6 F1LMQ3 F1LMZ8 F1M3L4 F1M6I7 F7EWF8 F7FGV7 G3V6W6 G3V8G2 O88761 P0CG51 P17220 P18420 P18421 P18422 P21670 P28064 P28073 P28075 P28077 P34064 P34067 P40112 P40307 P48004 P60901 P62193 P62198 P62982 P97613 Q4FZT9 Q4KM35 Q4V8A2 Q4V8E2 Q5XIC6 Q5XIU5 Q62623 Q63347 Q63429 Q63569 Q63570 Q63797 Q63798 Q6YDN7 Q9JHW0 Q9WTV5 Q9Z2X3	Anapc1 Anapc15 Anapc16 Anapc2 Anapc4 Anapc5 Anapc7 Cdc16 Cdc20 Cdc23 Cdc26 Cdc27 LOC100360645 LOC100360846 LOC100365869 LOC100366017 Lmp10 Lmp2 Mecl1 Mss1 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma8 Psmb1 Psmb10 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb6l Psmb6l1 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme4 Psmf1 Pttg Pttg1 Ring12 Rps27a Sug1 Tbp1 Tbp7 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Ube2c Ube2d1 Ube2e1 Ube2s	Rattus norvegicus (Norway rat)
TRIF-mediated programmed cell death	Caspase-8 FAS-associated death domain protein Lymphocyte antigen 96 Monocyte differentiation antigen CD14 Receptor interacting serine/threonine kinase 1 Receptor-interacting serine/threonine-protein kinase 3 TIR domain containing adaptor molecule 2 TIR domain-containing adapter molecule 1 Toll-like receptor 4	D3ZXR7 D3ZYL0 M0RA08 Q56DL5 Q63691 Q8R2E7 Q9JHX4 Q9QX05 Q9Z2P5	Casp8 Cd14 Fadd Ly96 Plin3 Rip3 Ripk1 Ripk3 Ticam1 Ticam2 Tlr4	Rattus norvegicus (Norway rat)
Glycogen breakdown (glycogenolysis)	Calmodulin-3 Glycogen debranching enzyme Glycogen phosphorylase, liver form Glycogen phosphorylase, muscle form Glycogenin-1 Lysosomal alpha-glucosidase Phosphoglucomutase-1 Phosphorylase b kinase gamma catalytic chain, liver/testis isoform Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform Phosphorylase b kinase regulatory subunit Phosphorylase b kinase regulatory subunit	A0A8I5ZWF0 A0A8J8YFM3 D4AEH9 O08730 P09811 P09812 P0DP31 P13286 P31325 P38652 Q64649 Q6P7A9	AABR07037995.1 Agl CaMIII Calm3 Cam3 Camc Gaa Gyg Gyg1 Lgp Pgm1 Phka1 Phka2 Phkb Phkg Phkg1 Phkg2 Pygl Pygm	Rattus norvegicus (Norway rat)	G58161NS
Regulation of IFNA/IFNB signaling	Interferon 1ai1 Interferon 1ai2 Interferon 1ai3 Interferon alpha and beta receptor subunit 1 Interferon alpha and beta receptor subunit 2 Interferon alpha-1-like Interferon alpha-12-like Interferon alpha-12-like Interferon alpha-12-like Interferon alpha-12-like Interferon alpha-12-like Interferon alpha-1 Interferon beta Signal transducer and activator of transcription 4 Signal transducer and activator of transcription Tyrosine-protein kinase Tyrosine-protein kinase Tyrosine-protein phosphatase non-receptor type 11 Tyrosine-protein phosphatase non-receptor type 1 Tyrosine-protein phosphatase non-receptor type 6 Uncharacterized protein ubiquitinyl hydrolase 1	A0A0G2JX93 A0A7R8C3L7 A0A8I5ZN08 A0A8I5ZQR5 A0A8I6A4N8 A0A8I6AEQ7 A0A8I6AM23 A0A8I6AN84 A0A8I6ANZ6 A0A8I6GMD9 D3Z919 D3ZD03 D3ZDS9 D3ZFH0 F7EYG9 M0R8H7 P05011 P20417 P41499 P70499 P81718 Q6AYC7	ENSRNOG00000065554 If1ai1 If1ai2 If1ai3 Ifna1 Ifna12l Ifna4 Ifna4l1 Ifnar1 Ifnar2 Ifnb Ifnb1 Jak1 LOC100911527 LOC120103158 LOC120103159 LOC120103160 LOC120103161 LOC120103162 LOC120103163 LOC120103164 Ptph6 Ptpn1 Ptpn11 Ptpn6 RGD1560539 Stat1 Stat2 Stat4 Tyk2 Usp18	Rattus norvegicus (Norway rat)
Recycling of bile acids and salts	ATP-binding cassette sub-family C member 3 Albumin Bile acid receptor Bile acid-CoA Bile salt export pump Gastrotropin Hepatic sodium/bile acid cotransporter Ileal sodium/bile acid cotransporter Long-chain fatty acid transport protein 5 Nuclear receptor coactivator 2 Nuclear receptor coactivator Retinoic acid receptor RXR-alpha Solute carrier family 51 subunit alpha Solute carrier family 51 subunit beta Solute carrier organic anion transporter family member 1A4 Solute carrier organic anion transporter family member 1B2 StAR-related lipid transfer domain containing 5	A0A8I6APA0 D3ZN38 D3ZYJ2 D4AC81 O35913 O70127 O88563 P02770 P26435 P80020 Q05343 Q62633 Q62735 Q63276 Q9ES38 Q9QZX8 Q9WUI9	Abcb11 Abcc3 Acsb Alb Baat Bar Bsep Cmoat2 Fabp6 Fatp5 Fxr Ilbp Illbp Mlp2 Mrp3 Ncoa1 Ncoa2 Nr1h4 Nr2b1 Ntcp Ntcp2 Oatp1a4 Oatp1b2 Oatp2 Rip14 Rxra Slc10a1 Slc10a2 Slc21a10 Slc21a5 Slc27a5 Slc51a Slc51b Slco1a4 Slco1b2 Spgp Stard5 Tif2 Vlacsr	Rattus norvegicus (Norway rat)

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