GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 401 - 425 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol ▼ Organism GlyTouCan ID
Interleukin-1 signaling
  • Btrc
  • Chuk
  • Cul1
  • ENSRNOG00000067007
  • Ikba
  • Ikbkb
  • Ikbkg
  • Ikkb
  • Il-1r2
  • Il-1ra
  • Il1a
  • Il1b
  • Il1r1
  • Il1r2
  • Il1ra
  • Il1rap
  • Il1rb
  • Il1rn
  • Irak1
  • Irak2
  • Irak3
  • Irak4
  • LOC100360645
  • Map2k6
  • Map3k7
  • Map3k7ip2
  • Mkk6
  • Myd88
  • Nemo
  • Nfkbia
  • Peli2
  • Rbx1
  • Rela
  • Rps27a
  • Skp1
  • Skp1a
  • Sqstm1
  • Tab1
  • Tab2
  • Tab3
  • Tollip
  • Traf6
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Zip
Rattus norvegicus (Norway rat)
SCF-beta-TrCP mediated degradation of Emi1
  • Btrc
  • Cdc20
  • Cul1
  • Fzr1
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Ring12
  • Rps27a
  • Skp1
  • Skp1a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Butyrophilin (BTN) family interactions
  • Btn1a1
  • Btn2a2
  • Btnl2
  • Btnl9
  • Cd209a
  • LOC684480
  • Ppl
  • Xdh
Rattus norvegicus (Norway rat)
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain
  • Btg2
  • Ccr4
  • Cdc25c
  • Cenpj
  • Cnk
  • Cnot1
  • Cnot10
  • Cnot11
  • Cnot2
  • Cnot3
  • Cnot4
  • Cnot6
  • Cnot6l
  • Cnot9
  • Fnk
  • Npm1
  • Pc3
  • Plk2
  • Plk3
  • Rcd1
  • Rqcd1
  • Snk
  • Tnks1bp1
Rattus norvegicus (Norway rat)
PI3K events in ERBB4 signaling
  • Btc
  • Dtr
  • Ereg
  • Hbegf
  • Hegfl
  • Ndf
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Pik3ca
  • Pik3r1
Rattus norvegicus (Norway rat)
Signaling by ERBB4
  • Btc
  • Dtr
  • Egf
  • Egfr
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Ndf
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
Rattus norvegicus (Norway rat)
ERBB2 Activates PTK6 Signaling
  • Btc
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Ptk6
Rattus norvegicus (Norway rat)
SHC1 events in ERBB2 signaling
  • Btc
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Pkca
  • Pkcd
  • Pkce
  • Prkca
  • Prkcd
  • Prkce
  • Ptpn12
  • Shc1
Rattus norvegicus (Norway rat)
Signaling by ERBB2
  • Btc
  • Cdc37
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Fyn
  • Hbegf
  • Hegfl
  • Hsp86
  • Hsp90aa1
  • Hspca
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
Nicotinate metabolism
  • Bst1
  • Cd38
  • Mnadk
  • Nadk
  • Nadk2
  • Nadkd1
  • Nadsyn1
  • Nmnat1
  • Nmnat2
  • Nmnat3
  • Nmrk1
  • Nrk1
  • Nt5
  • Nt5e
  • Nte
  • Qns1
  • Qprt
Rattus norvegicus (Norway rat)
Proton-coupled monocarboxylate transport
  • Bsg
  • Emb
  • Gp70
  • Mct1
  • Mct2
  • Mct3
  • Mct4
  • Slc16a1
  • Slc16a3
  • Slc16a7
  • Slc16a8
Rattus norvegicus (Norway rat)
Negative feedback regulation of MAPK pathway
  • Braf
  • Erk1
  • Erk2
  • Map2k1
  • Map2k2
  • Mapk
  • Mapk1
  • Mapk3
  • Mek1
  • Mek2
  • Mkk2
  • Prkm1
  • Prkm3
  • Prkmk1
  • Prkmk2
  • Raf
  • Raf1
Rattus norvegicus (Norway rat)
Frs2-mediated activation
  • Braf
  • Crkl
  • Erk1
  • Erk2
  • Frs2
  • Krev1
  • Map2k1
  • Map2k2
  • Mapk
  • Mapk1
  • Mapk3
  • Mek1
  • Mek2
  • Mkk2
  • Ngf
  • Ngfb
  • Ntrk1
  • Prkm1
  • Prkm3
  • Prkmk1
  • Prkmk2
  • Rap1a
  • Rapgef1
  • Trk
  • Trka
  • Ywhab
Rattus norvegicus (Norway rat)
Toll Like Receptor 4 (TLR4) Cascade
  • Bpi
  • Cd14
  • Cd180
  • Dnm
  • Dnm1
  • Dnm2
  • Dnm3
  • Dyn2
  • Dyn3
  • Lbp
  • Ly86
  • Ly96
  • Plcg2
  • Ptpn4
  • Ticam2
  • Tlr4
Rattus norvegicus (Norway rat)
Antimicrobial peptides
  • Bpi
  • Bpifa1
  • Bpifa2
  • Bpifb1
  • Bpifb2
  • Bpifb4
  • Bpifb6
  • Camp
  • Chga
  • Clu
  • Ctsg
  • Ear1
  • Elane
  • Eppin
  • Itln1
  • LOC100361909
  • LOC100365995
  • LOC102554637
  • LOC299567
  • LOC474169
  • LOC683849
  • Leap2
  • Lplunc1
  • Lplunc4
  • Ltf
  • Lyz
  • Lyz1
  • Pap
  • Pap1
  • Pap2
  • Pap3
  • Pglyrp
  • Pglyrp1
  • Pglyrp2
  • Pglyrp4
  • Pgrp
  • Pla2g2a
  • Plunc
  • Prss1
  • Prss2
  • Prss2l1
  • Prss3
  • Prtn3
  • Psp
  • R15
  • Raf1
  • Raf4
  • Reg2
  • Reg3
  • Reg3a
  • Reg3b
  • Reg3g
  • Rnase2
  • Rnase6
  • Ry2g5
  • Spinlw1
  • Stath
  • Svs3b
  • Trp1
  • Try1
  • Try10
  • Try2
  • Try4
  • Try5
  • Tryp1
Rattus norvegicus (Norway rat)
Glutathione synthesis and recycling
  • Botch
  • Chac1
  • Chac2
  • Cndp2
  • Gclc
  • Gclm
  • Ggct
  • Ggt
  • Ggt1
  • Ggt5
  • Ggt6
  • Ggt7
  • Ggtl3
  • Ggtla1
  • Glclc
  • Glclr
  • Gss
  • Npg7
  • Oplah
Rattus norvegicus (Norway rat)
Organic anion transporters
  • Bnpi
  • Dnpi
  • Gc1
  • Nis
  • Npt1
  • Slc17a1
  • Slc17a6
  • Slc17a7
  • Slc17a8
  • Slc20a3
  • Slc20a4
  • Slc25a1
  • Slc25a10
  • Slc25a11
  • Slc25a18
  • Slc25a22
  • Slc5a5
  • Slc5a8
  • Vglut1
  • Vglut2
  • Vglut3
Rattus norvegicus (Norway rat)
Nitric oxide stimulates guanylate cyclase
  • Bnos
  • Nos1
  • Nos2
  • Nos3
Rattus norvegicus (Norway rat)
Crosslinking of collagen fibrils
  • Bmp1
  • Lox
  • Loxl1
  • Loxl2
  • Loxl3
  • Loxl4
  • Pcolce
  • Pcpe1
  • Pxdn
  • Tll1
  • Tll2
Rattus norvegicus (Norway rat)
Molecules associated with elastic fibres
  • Bmp-2
  • Bmp-4
  • Bmp10
  • Bmp2
  • Bmp4
  • Bmp7
  • Dance
  • Dvr-4
  • Efemp2
  • Fbln2
  • Fbln5
  • Gdf5
  • Itga8
  • Itgav
  • Itgb1
  • Itgb3
  • Itgb5
  • Itgb6
  • Itgb8
  • Ltbp1
  • Ltbp2
  • Ltbp3
  • Ltbp4
  • Mfap2
  • Mfap4
  • Mfap5
  • Tgf-b3
  • Tgfb1
  • Tgfb2
  • Tgfb3
  • Vtn
Rattus norvegicus (Norway rat)
ERKs are inactivated
  • Bmk1
  • Dusp3
  • Dusp4
  • Dusp6
  • Dusp7
  • Erk1
  • Erk2
  • Erk5
  • Mapk
  • Mapk1
  • Mapk3
  • Mapk7
  • Mkp2
  • Mkp3
  • Mkpx
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkm1
  • Prkm3
  • Vrk3
Rattus norvegicus (Norway rat)
ERK/MAPK targets
  • Bmk1
  • Csbp1
  • Csbp2
  • Erk1
  • Erk2
  • Erk5
  • Mapk
  • Mapk1
  • Mapk11
  • Mapk14
  • Mapk3
  • Mapk7
  • Mapkapk1a
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkm1
  • Prkm3
  • Rps6ka1
  • Rps6ka2
  • Rps6ka3
  • Rps6ka5
  • Rsk1
Rattus norvegicus (Norway rat)
Gastrin-CREB signalling pathway via PKC and MAPK
  • Bmk1
  • Cckbr
  • Creb-1
  • Creb1
  • Erk1
  • Erk2
  • Erk5
  • Gas
  • Gast
  • Mapk
  • Mapk1
  • Mapk3
  • Mapk7
  • Mapkapk1a
  • Prkm1
  • Prkm3
  • Rps6ka1
  • Rps6ka2
  • Rps6ka3
  • Rsk1
Rattus norvegicus (Norway rat)
Activation of BMF and translocation to mitochondria
  • Bmf
  • Dlc2
  • Dynll2
  • Jnk1
  • Mapk8
  • Prkm8
Rattus norvegicus (Norway rat)
Golgi Cisternae Pericentriolar Stack Reorganization
  • Blzf1
  • Erk1
  • Erk2
  • Golga2
  • Gorasp1
  • Gorasp2
  • Grasp65
  • Mapk
  • Mapk1
  • Mapk3
  • Plk
  • Plk1
  • Prkm1
  • Prkm3
  • Rab1
  • Rab1A
  • Rab1b
  • Rab2
  • Rab2a
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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