GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 451 - 475 of 1070 in total
Pathway Name Protein Name ▼ UniProt ID Gene Symbol Organism GlyTouCan ID
Cyclin E associated events during G1/S transition
  • Akt1
  • Akt2
  • Akt3
  • Cables1
  • Cak
  • Cak1
  • Ccne
  • Ccne1
  • Ccne2
  • Ccnh
  • Cdc25a
  • Cdk2
  • Cdk7
  • Cdkn1a
  • Cdkn1b
  • Cdkn2
  • Mnat1
  • Mo15
  • Rb-1
  • Rb1
  • Wee1
  • p27Kip1
Rattus norvegicus (Norway rat)
CD28 co-stimulation
  • Cd28
  • Cd80
  • Cd86
  • Fyn
  • Grap2
  • Lck
  • Lyn
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
CTLA4 inhibitory signaling
  • Akt1
  • Akt2
  • Akt3
  • Cd80
  • Cd86
  • Ctla4
  • Fyn
  • LOC100909468
  • Lck
  • Lyn
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5a
  • Ppp2r5b
  • Ppp2r5c
  • Ppp2r5d
  • Ppp2r5e
  • Ptpn11
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
CD28 dependent Vav1 pathway
  • Ash
  • Cd28
  • Cd80
  • Cd86
  • Cdc42
  • Fyn
  • Grb2
  • Lck
  • Pak1
  • Pak2
  • Pak3
  • Rac
  • Rac1
  • Vav
  • Vav1
Rattus norvegicus (Norway rat)
Transport of RCbl within the body
  • Abcc1
  • Arh
  • Cd320
  • Ldlrap1
  • Lrp2
  • Mrp1
  • Tcn2
Rattus norvegicus (Norway rat)
PD-1 signaling
  • AABR07044416.1
  • Arrb2-ps
  • Cd247
  • Cd274
  • Cd3d
  • Cd3e
  • Cd3g
  • Cd4
  • Csk
  • DA1
  • Db2
  • ENSRNOG00000065769
  • ENSRNOG00000065908
  • ENSRNOG00000065955
  • ENSRNOG00000070909
  • H2-Ea
  • Hla-dma
  • Hla-dmb
  • LOC100911800
  • Lck
  • Pdcd1
  • Pdcd1lg2
  • Psmb9
  • Ptph6
  • Ptpn11
  • Ptpn6
  • RT1-Ba
  • RT1-Bb
  • RT1-DOb
  • RT1-Da
  • RT1-Db1
  • RT1-Db2
  • RT1-Ha
  • RT1-Hb-ps1
  • T3d
  • Tap1
  • Tap2
  • Tesb
  • Trbv16
Rattus norvegicus (Norway rat)
Type I hemidesmosome assembly
  • Cd151
  • Col17a1
  • Dst
  • Egfl3
  • Itga6
  • Itgb4
  • Megf6
  • Peta3
  • Plec
  • Plec1
Rattus norvegicus (Norway rat)
TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain
  • Btg2
  • Ccr4
  • Cdc25c
  • Cenpj
  • Cnk
  • Cnot1
  • Cnot10
  • Cnot11
  • Cnot2
  • Cnot3
  • Cnot4
  • Cnot6
  • Cnot6l
  • Cnot9
  • Fnk
  • Npm1
  • Pc3
  • Plk2
  • Plk3
  • Rcd1
  • Rqcd1
  • Snk
  • Tnks1bp1
Rattus norvegicus (Norway rat)
CASP8 activity is inhibited
  • AABR07018323.1
  • Apt1
  • Apt1Lg1
  • Casp8
  • Cd95l
  • Cflar
  • Fadd
  • Fas
  • Fasl
  • Faslg
  • Ripk1
  • Tnfrsf10b
  • Tnfrsf6
  • Tnfsf10
  • Tnfsf6
  • Tnlg6a
  • Tradd
  • Traf2
Rattus norvegicus (Norway rat)
Dimerization of procaspase-8
  • AABR07018323.1
  • Apt1
  • Apt1Lg1
  • Casp8
  • Cd95l
  • Cflar
  • Fadd
  • Fas
  • Fasl
  • Faslg
  • Ripk1
  • Tnfrsf10b
  • Tnfrsf6
  • Tnfsf10
  • Tnfsf6
  • Tnlg6a
  • Tradd
  • Traf2
Rattus norvegicus (Norway rat)
Regulation by c-FLIP
  • AABR07018323.1
  • Apt1
  • Apt1Lg1
  • Casp8
  • Cd95l
  • Cflar
  • Fadd
  • Fas
  • Fasl
  • Faslg
  • Ripk1
  • Tnfrsf10b
  • Tnfrsf6
  • Tnfsf10
  • Tnfsf6
  • Tnlg6a
  • Tradd
  • Traf2
Rattus norvegicus (Norway rat)
Regulation of Complement cascade
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • C1qa
  • C1qb
  • C1qc
  • C1qg
  • C1r
  • C1s
  • C2
  • C3
  • C3ar1
  • C4
  • C4a
  • C4b
  • C5
  • C5ar1
  • C5ar2
  • C5l2
  • C5r1
  • C9
  • Cd19
  • Cd46
  • Cd55
  • Cd81
  • Cfb
  • Cfh
  • Cfhr2
  • Cfi
  • Clu
  • Cpb2
  • Cpn1
  • Cpn2
  • Cr1l
  • Cr2
  • Crry
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066867
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Elane
  • F2
  • Gpr77
  • If
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Mcp
  • RGD1561722
  • RGD1564696
  • Serping1
  • Tapa1
  • r-gsp
Rattus norvegicus (Norway rat)
Generic Transcription Pathway
  • 9130023H24Rik
  • AABR07002893.1
  • ENSRNOG00000064392
  • ENSRNOG00000065506
  • ENSRNOG00000067347
  • ENSRNOG00000067761
  • ENSRNOG00000069512
  • ENSRNOG00000069557
  • Giot1
  • Hit39
  • Kap1
  • Kid1
  • Krba1
  • LOC100359967
  • LOC100365363
  • LOC100366023
  • LOC100909688
  • LOC100910577
  • LOC100911224
  • LOC100912683
  • LOC100912787
  • LOC102546572
  • LOC102546648
  • LOC102547287
  • LOC102547412
  • LOC102548695
  • LOC102550291
  • LOC102550944
  • LOC102552527
  • LOC102553866
  • LOC102555672
  • LOC102556092
  • LOC103691238
  • LOC108348090
  • LOC108348123
  • LOC108348125
  • LOC108348224
  • LOC108348302
  • LOC120094815
  • LOC120094816
  • LOC361487
  • LOC680200
  • LOC682206
  • LOC682834
  • LOC688328
  • MGC72612
  • Mip1
  • Mipu1
  • Nrif1
  • Prdm5
  • RGD1561413
  • RGD1561832
  • RGD1566325
  • RGD1566386
  • Rlzfy
  • Rsl1
  • Staf
  • Tcf17
  • Tif1b
  • Trim28
  • Zfp1
  • Zfp110
  • Zfp111
  • Zfp112
  • Zfp12
  • Zfp13
  • Zfp133
  • Zfp141
  • Zfp143
  • Zfp157
  • Zfp160
  • Zfp167
  • Zfp169
  • Zfp18
  • Zfp184
  • Zfp189
  • Zfp192
  • Zfp2
  • Zfp202
  • Zfp212
  • Zfp213
  • Zfp23
  • Zfp239l1
  • Zfp248
  • Zfp26
  • Zfp263
  • Zfp267
  • Zfp273l-ps1
  • Zfp28
  • Zfp282
  • Zfp286a
  • Zfp317
  • Zfp324
  • Zfp354a
  • Zfp354c
  • Zfp37-ps1
  • Zfp382
  • Zfp386
  • Zfp39
  • Zfp394
  • Zfp398
  • Zfp420
  • Zfp426
  • Zfp445
  • Zfp446
  • Zfp455
  • Zfp455l1
  • Zfp458
  • Zfp470
  • Zfp472
  • Zfp473
  • Zfp496
  • Zfp498
  • Zfp52
  • Zfp534l2
  • Zfp535
  • Zfp54
  • Zfp560
  • Zfp563
  • Zfp566
  • Zfp58
  • Zfp583
  • Zfp599
  • Zfp605
  • Zfp606
  • Zfp612
  • Zfp617
  • Zfp629
  • Zfp641
  • Zfp647
  • Zfp655
  • Zfp658
  • Zfp664
  • Zfp667
  • Zfp668
  • Zfp677
  • Zfp68
  • Zfp688
  • Zfp689
  • Zfp703
  • Zfp704
  • Zfp706
  • Zfp707
  • Zfp707l1
  • Zfp708
  • Zfp709l1
  • Zfp709l2
  • Zfp710
  • Zfp715
  • Zfp717
  • Zfp74
  • Zfp746
  • Zfp748
  • Zfp748-ps1
  • Zfp764
  • Zfp764l1
  • Zfp77
  • Zfp770
  • Zfp772
  • Zfp773-ps1
  • Zfp775
  • Zfp78
  • Zfp780b-ps1
  • Zfp788
  • Zfp790l2
  • Zfp799
  • Zfp80
  • Zfp804b
  • Zfp808l3
  • Zfp839
  • Zfp846
  • Zfp866
  • Zfp867
  • Zfp868
  • Zfp869
  • Zfp87
  • Zfp870
  • Zfp874b
  • Zfp9
  • Zfp90
  • Zfp939
  • Zfp94
  • Zfp94l1
  • Zfp950
  • Zfp950l11
  • Zfp950l12
  • Zfp950l4
  • Zfp951
  • Zfp954
  • Zfp961
  • Zfp973
  • Zfp99
  • Zik1
  • Zkscan1
  • Zkscan3
  • Zkscan4
  • Zkscan5
  • Zkscan7
  • Zkscan8
  • Znf143
  • Znf18
  • Znf248
  • Znf354a
  • Znf354b
  • Znf354c
  • Znf382
  • Znf394
  • Znf426
  • Znf454
  • Znf667
  • Znf689
  • Znf740
  • Znf750
  • Znf770
  • Znf773
  • Znf845l-ps1
  • Znf846
  • Zscan25
Rattus norvegicus (Norway rat)
SUMOylation of transcription cofactors
  • Bars
  • Cap1
  • Casp8ap2
  • Cbx2
  • Cbx4
  • Cbx8
  • Ctbp1
  • Ctbp3
  • Daxx
  • Ddx17
  • Ddx5
  • Ep300
  • Mbd1
  • Miz1
  • Mkl1
  • Mrtfa
  • Ncoa1
  • Npm1
  • Nrip1
  • Park7
  • Phc1
  • Phc2
  • Phc3
  • Pias1
  • Pias2
  • Pias3
  • Pias4
  • Piasx
  • Ring1
  • Ring1b
  • Rnf1
  • Rnf2
  • Safb
  • Safb1
  • Scml2
  • Sin3a
  • Smt3a
  • Smt3h2
  • Sumo1
  • Sumo2
  • Sumo3
  • Topors
  • Ubce9
  • Ube2i
  • Uhrf2
  • Zfp131
Rattus norvegicus (Norway rat)
Repression of WNT target genes
  • Bars
  • Ctbp1
  • Ctbp2
  • Ctbp3
  • Esp2
  • Esp3
  • Grg4
  • Lef1
  • Tcf7
  • Tcf7l1
  • Tcf7l2
  • Tle1
  • Tle2
  • Tle3
  • Tle4
Rattus norvegicus (Norway rat)
Classical antibody-mediated complement activation
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • C1qa
  • C1qb
  • C1qc
  • C1qg
  • C1r
  • C1s
  • Crp
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Ptx1
  • RGD1561722
  • RGD1564696
  • r-gsp
Rattus norvegicus (Norway rat)
Butyrophilin (BTN) family interactions
  • Btn1a1
  • Btn2a2
  • Btnl2
  • Btnl9
  • Cd209a
  • LOC684480
  • Ppl
  • Xdh
Rattus norvegicus (Norway rat)
Chromatin modifying enzymes
  • Baf190a
  • Brg1
  • Brwd1
  • H3c13
  • Hist2h3c2
  • Pad1
  • Pad2
  • Pad3
  • Pad4
  • Padi1
  • Padi2
  • Padi3
  • Padi4
  • Padi6
  • Pdi
  • Pdi1
  • Pdi2
  • Pdi3
  • Pdi4
  • Smarca4
  • Snf2b
  • Snf2l4
Rattus norvegicus (Norway rat)
Interleukin-7 signaling
  • Baf190a
  • Brg1
  • Brwd1
  • H3c13
  • Hist2h3c2
  • Il7
  • Il7r
  • Irs-1
  • Irs1
  • Irs2
  • Jak1
  • Jak3
  • Mgf
  • Pik3r1
  • Pik3r2
  • Pik3r3
  • Smarca4
  • Snf2b
  • Snf2l4
  • Stat3
  • Stat5a
  • Stat5b
  • Tslp
Rattus norvegicus (Norway rat)
HATs acetylate histones
  • Atf2
  • Brd1
  • Brpf1
  • Brpf3
  • ENSRNOG00000064540
  • ENSRNOG00000066901
  • ENSRNOG00000068034
  • H2bc1
  • H2bc12l1
  • H2bc18
  • H2bc6
  • H2bcl1
  • H2bcl2
  • H2bu1
  • H3c13
  • H4c16
  • H4c2
  • H4f16
  • H4ft
  • Hat1
  • Hbo1
  • Hcfc1
  • Hist1h2ba
  • Hist1h2bc
  • Hist1h2bg
  • Hist1h2bo
  • Hist1h2bq
  • Hist1h4b
  • Hist1h4m
  • Hist2h3c2
  • Hist4
  • Hist4h4
  • Ing4
  • Ing5
  • Jade1
  • Jade2
  • Jade3
  • Kansl1
  • Kansl2
  • Kansl3
  • Kat6a
  • Kat6b
  • Kat7
  • Kat8
  • LOC100365043
  • LOC100910200
  • LOC100912338
  • LOC684797
  • Mcrs1
  • Meaf6
  • Moz
  • Msl1
  • Msl2
  • Msl3
  • Myst1
  • Myst2
  • Myst3
  • Ncoa1
  • Ncoa2
  • Nsl2
  • Nsl3
  • Ogt
  • Pax3
  • Phf15
  • Phf20
  • Rbbp7
  • Th2b
  • Tif2
  • Wdr5
Rattus norvegicus (Norway rat)
Regulation of TP53 Activity through Acetylation
  • Akt1
  • Akt2
  • Akt3
  • Brd1
  • Brd7
  • Brpf1
  • Brpf3
  • Chd3
  • Chd4
  • Ep300
  • Gatad2a
  • Gatad2b
  • Hdac1
  • Hdac2
  • Ing5
  • Kat6a
  • Mbd3
  • Meaf6
  • Moz
  • Mta2
  • Myst3
  • P53
  • Pml
  • Rbbp4
  • Rbbp7
  • Tp53
Rattus norvegicus (Norway rat)
Iron uptake and transport
  • AABR07054189.1
  • Abcg2
  • Aco1
  • Bcrp1
  • Boct
  • Boit
  • Cand1
  • Cp
  • Cul1
  • Cybrd1
  • Dct1
  • Dcytb
  • Dmt1
  • Fbxl5
  • Fpn1
  • Fpt1
  • Fth
  • Fth1
  • Fth1-ps5
  • Ftl
  • Ftl1
  • Ftl1l2
  • Ftmt
  • Hcp1
  • Heph
  • Hmox1
  • Hmox2
  • Ireb1
  • Ireb2
  • Irebp
  • Irp2
  • LOC100359668
  • LOC100360645
  • Lcn2
  • Nedd8
  • Nramp2
  • Pcft
  • Rps27a
  • Skp1
  • Skp1a
  • Slc11a2
  • Slc22a17
  • Slc40a1
  • Slc46a1
  • Tf
  • Tip120
  • Tip120a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Detoxification of Reactive Oxygen Species
  • AC128290.1
  • Aipla2
  • Aop2
  • Cas1
  • Cat
  • Ccs
  • Cyba
  • Cybb
  • Cycs
  • Cycsl2
  • Cycsl3
  • Ero1a
  • Ero1l
  • Giig11
  • Gpx1
  • Gpx2
  • Gpx3
  • Gpx5
  • Gpx6
  • Gpx7
  • Gpx8
  • Gsr
  • Gstp1
  • Kox
  • LOC690675
  • Ncf1
  • Ncf2
  • Ncf4
  • Nox4
  • Nudt2
  • P4hb
  • Pdia1
  • Prdx1
  • Prdx2
  • Prdx3
  • Prdx5
  • Prdx6
  • RGD1562558
  • Sod-3
  • Sod1
  • Sod2
  • Sod3
  • Tdpx1
  • Tdpx2
  • Trx2
  • Trxr1
  • Trxr2
  • Tsa
  • Txn
  • Txn1
  • Txn2
  • Txnrd1
  • Txnrd2
Rattus norvegicus (Norway rat)
Digestion of dietary lipid
  • Cel
  • Clps
  • Lipf
  • Plrp1
  • Plrp2
  • Pnlip
  • Pnliprp1
  • Pnliprp2
Rattus norvegicus (Norway rat)
Dermatan sulfate biosynthesis
  • Bcan
  • Behab
  • Bgn
  • Caleb
  • Chst14
  • Cspg2
  • Cspg3
  • Cspg4
  • Cspg5
  • Dcn
  • Dse
  • Dsel
  • Ncan
  • Ng2
  • Ngc
  • Ust
  • Vcan
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024