GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **26 - 50** of **1070** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▼	Organism	GlyTouCan ID
Opioid Signalling	Mu-type opioid receptor Pro-opiomelanocortin Proenkephalin-B	P01194 P06300 P33535	Oprm1 Pdyn Pomc Pomc2 Ror-b	Rattus norvegicus (Norway rat)
Neurotransmitter clearance	Solute carrier family 22 member 1 Solute carrier family 22 member 2	Q63089 Q9R0W2	Oct1 Oct2 Slc22a1 Slc22a2	Rattus norvegicus (Norway rat)
Abacavir transmembrane transport	Solute carrier family 22 member 1 Solute carrier family 22 member 2 Solute carrier family 22 member 3	O88446 Q63089 Q9R0W2	Oct1 Oct2 Oct3 Slc22a1 Slc22a2 Slc22a3	Rattus norvegicus (Norway rat)
NTF3 activates NTRK3 signaling	NT-3 growth factor receptor Neurotrophin-3	P18280 Q03351	Ntf-3 Ntf3 Ntrk3 Trkc	Rattus norvegicus (Norway rat)
Activated NTRK3 signals through PI3K	NT-3 growth factor receptor Neurotrophin-3 Proto-oncogene tyrosine-protein kinase Src	P18280 Q03351 Q9WUD9	Ntf-3 Ntf3 Ntrk3 Src Trkc	Rattus norvegicus (Norway rat)
Activated NTRK3 signals through PLCG1	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 NT-3 growth factor receptor Neurotrophin-3	P10686 P18280 Q03351	Ntf-3 Ntf3 Ntrk3 Plcg1 Trkc	Rattus norvegicus (Norway rat)
Intestinal lipid absorption	NPC1-like intracellular cholesterol transporter 1	Q6T3U3	Npc1l1	Rattus norvegicus (Norway rat)
Pre-NOTCH Processing in Golgi	Neurogenic locus notch homolog protein 3 Transmembrane emp24 domain-containing protein 2	Q63524 Q9R172	Notch3 Rnp24 Tmed2	Rattus norvegicus (Norway rat)
NOSIP mediated eNOS trafficking	Nitric oxide synthase 3 Nitric oxide synthase-interacting protein	A0A8I5ZL30 Q62600	Nos3 Nosip	Rattus norvegicus (Norway rat)
Organic anion transport	Organic anion transporter 3 Solute carrier family 22 member 12 Solute carrier family 22 member 6 Solute carrier family 22 member 7	O35956 Q3ZAV1 Q5RLM2 Q9R1U7	Nlt Oat1 Oat2 Oat3 Slc22a12 Slc22a6 Slc22a7 Slc22a8 Urat1	Rattus norvegicus (Norway rat)
Tachykinin receptors bind tachykinins	Neuromedin-K receptor Protachykinin-1 Substance-K receptor Substance-P receptor Tachykinin-3	P06767 P08435 P14600 P16177 P16610	Nka Nkna Nknb Tac1 Tac1r Tac2 Tac2r Tac3 Tac3r Tacr1 Tacr2 Tacr3	Rattus norvegicus (Norway rat)
Sodium/Proton exchangers	Sodium/hydrogen exchanger 1 Sodium/hydrogen exchanger 2 Sodium/hydrogen exchanger 3 Sodium/hydrogen exchanger 4 Sodium/hydrogen exchanger 5 Sodium/hydrogen exchanger 6 Sodium/hydrogen exchanger 8 Sodium/hydrogen exchanger 9 Sodium/hydrogen exchanger	D3ZCI2 D3ZJ86 D4A7H1 P26431 P26433 P26434 P48763 Q4L208 Q9Z0X2	Nhe1 Nhe2 Nhe3 Nhe4 Nhe5 Nhe8 Nhe9 Slc9a1 Slc9a2 Slc9a3 Slc9a4 Slc9a5 Slc9a6 Slc9a7 Slc9a8 Slc9a9	Rattus norvegicus (Norway rat)
TRKA activation by NGF	Beta-nerve growth factor High affinity nerve growth factor receptor	P25427 P35739	Ngf Ngfb Ntrk1 Trk Trka	Rattus norvegicus (Norway rat)
NFG and proNGF binds to p75NTR	Beta-nerve growth factor Tumor necrosis factor receptor superfamily member 16	P07174 P25427	Ngf Ngfb Ngfr Tnfrsf16	Rattus norvegicus (Norway rat)
Sodium-coupled sulphate, di- and tri-carboxylate transporters	Na(+)/citrate cotransporter Na(+)/dicarboxylate cotransporter 3 Sodium sulfate cotransporter-2 Solute carrier family 13 member 1 Solute carrier family 13 member 2	P70545 Q07782 Q5EC47 Q8CJ44 Q9Z0Z5	Nact Nadc1 Nadc3 Nas1 Nasi1 Sdct1 Sdct2 Slc13a1 Slc13a2 Slc13a3 Slc13a4 Slc13a5	Rattus norvegicus (Norway rat)
LDL remodeling	Microsomal triglyceride transfer protein large subunit Protein disulfide-isomerase	D4A1W8 P04785	Mtp Mttp P4hb Pdia1	Rattus norvegicus (Norway rat)
NOTCH4 Activation and Transmission of Signal to the Nucleus	14-3-3 protein zeta/delta	P63102	Msfs1 Ywhaz	Rattus norvegicus (Norway rat)
PKA-mediated phosphorylation of key metabolic factors	Carbohydrate-responsive element-binding protein	Q8VIP2	Mlxipl Wbscr14	Rattus norvegicus (Norway rat)
Synthesis of IPs in the ER lumen	Multiple inositol polyphosphate phosphatase 1	O35217	Minpp1	Rattus norvegicus (Norway rat)
Clearance of dopamine	Amine oxidase [flavin-containing] A Sodium-dependent dopamine transporter	P21396 P23977	Maoa Slc6a3	Rattus norvegicus (Norway rat)
Lysosomal oligosaccharide catabolism	Ab2-450 Alpha-mannosidase 2C1 Alpha-mannosidase Beta-mannosidase	F7FG85 P21139 Q4FZV0 Q7TP34	Man2b1 Man2b2 Man2c1 Manba Mrfap1	Rattus norvegicus (Norway rat)	G00027MO G25577BM G28233ME G70323CJ G90333CG
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2	alpha-1,2-Mannosidase alpha-1,2-Mannosidase alpha-1,2-Mannosidase	A0A0G2JW29 D3Z979 D3ZR49	Man1a1 Man1a2 Man1c1	Rattus norvegicus (Norway rat)	G70323CJ
RUNX3 regulates CDKN1A transcription	Cellular tumor antigen p53 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 Runt-related transcription factor Transforming growth factor beta-1 proprotein Zinc finger homeobox 3	A0A0G2K7T0 F1M4Q6 O70437 P10361 P17246 P84025	Madh3 Madh4 P53 Runx3 Smad3 Smad4 Tgfb1 Tp53 Zfhx3	Rattus norvegicus (Norway rat)
Proton-coupled neutral amino acid transporters	Proton-coupled amino acid transporter 1 Proton-coupled amino acid transporter 2	Q8K415 Q924A5	Lyaat1 Pat2 Slc36a1 Slc36a2 Tramd1	Rattus norvegicus (Norway rat)
LXRs regulate gene expression to control bile acid homeostasis	Nuclear receptor co-repressor 2 Nuclear receptor coactivator Oxysterols receptor LXR-alpha Oxysterols receptor LXR-beta Retinoic acid receptor RXR-alpha Retinoic acid receptor RXR-beta (Fragment)	A0A0G2JU91 A0A8I6APA0 P49743 Q05343 Q62685 Q62755	Lxra Lxrb Ncoa1 Ncor2 Nr1h2 Nr1h3 Nr2b1 Nr2b2 Rcor-1 Rxra Rxrb	Rattus norvegicus (Norway rat)

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