GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 601 - 625 of 1070 in total
Pathway Name Protein Name UniProt ID ▲ Gene Symbol Organism GlyTouCan ID
Negative regulation of FGFR1 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf17
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr1
  • Flg
  • Frs2
  • Grb2
  • Kl
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Stabilization of p53
  • Atm
  • LOC100360645
  • Mdm2
  • Mdm4
  • Mdmx
  • P53
  • Phf20
  • Rps27a
  • Tp53
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
NOTCH3 Activation and Transmission of Signal to the Nucleus
  • Adam10
  • Aph1a
  • Dll1
  • Dll4
  • Egf
  • Egfr
  • Jag1
  • Jag2
  • LOC100360645
  • Madm
  • Ncstn
  • Notch3
  • Ps2
  • Psen1
  • Psen2
  • Psenen
  • Psnl1
  • Psnl2
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Wwp2
Rattus norvegicus (Norway rat)
Translesion Synthesis by POLH
  • LOC100360645
  • Npl4
  • Nploc4
  • Pcna
  • Polh
  • Rfc1
  • Rfc2
  • Rfc3
  • Rfc4
  • Rfc5
  • Rpa1
  • Rpa2
  • Rpa3
  • Rps27a
  • Sprtn
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ufd1
  • Ufd1l
  • Vcp
Rattus norvegicus (Norway rat)
NRIF signals cell death from the nucleus
  • Aph1a
  • Cenpr
  • Itgb3bp
  • LOC100360645
  • Ncstn
  • Ngf
  • Ngfb
  • Ngfr
  • Nrif3
  • Ps2
  • Psen1
  • Psen2
  • Psenen
  • Psnl1
  • Psnl2
  • Rps27a
  • Sqstm1
  • Tnfrsf16
  • Traf6
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Zip
Rattus norvegicus (Norway rat)
Downregulation of ERBB2:ERBB3 signaling
  • Akt1
  • Akt2
  • Akt3
  • Erbb2
  • Erbb3
  • LOC100360645
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Ntak
  • Rnf41
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Usp8
Rattus norvegicus (Norway rat)
Josephin domain DUBs
  • Atxn3
  • Josd1
  • Josd2
  • LOC100360645
  • Mjd
  • Park2
  • Prkn
  • Rad23a
  • Rad23b
  • Rps27a
  • Sca3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vcp
Rattus norvegicus (Norway rat)
Retinoid metabolism and transport
  • Agrin
  • Agrn
  • Akr1b10
  • Akr1c1
  • Akr1c21
  • Apoa1
  • Apoa2
  • Apoa4
  • Apob
  • Apoc2
  • Apoc3
  • Apoe
  • Apom
  • Bcdo
  • Bcdo1
  • Bcmo1
  • Bco1
  • Bco2
  • Clps
  • Crbpii
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Gpihbp1
  • Hsd17b5
  • Hspg1
  • Lpl
  • Lrat
  • Lrp1
  • Lrp10
  • Lrp12
  • Lrp2
  • Lrp8
  • Phlpb
  • Plb1
  • Pnlip
  • Rbp-1
  • Rbp1
  • Rbp2
  • Rbp4
  • Rdh11
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Synd1
  • Synd2
  • Synd3
  • Synd4
  • Tt
  • Ttr
Rattus norvegicus (Norway rat)
Dissolution of Fibrin Clot
  • Anx2
  • Anxa2
  • Hrg
  • Hrg1
  • Pai1
  • Pai2
  • Pi7
  • Planh1
  • Planh2
  • Plat
  • Plau
  • Plaur
  • Plg
  • Pn1
  • S100a10
  • Serpinb2
  • Serpinb6a
  • Serpinb8
  • Serpine1
  • Serpine2
  • Serpinf2
Rattus norvegicus (Norway rat)
Mitochondrial Fatty Acid Beta-Oxidation
  • AC094055.1
  • Acaa2
  • Acad11
  • Acbd6
  • Acot1
  • Acot11
  • Acot12
  • Acot13
  • Acot2
  • Acot3
  • Acot5
  • Acot7
  • Acot9
  • Acsf2
  • Bach
  • Cach
  • Cach1
  • Cte1
  • Dbi
  • Mcat
  • Mte1
  • Ndufab1
  • Pctp
  • Stard2
  • Them4
  • Them5
Rattus norvegicus (Norway rat)
ERK/MAPK targets
  • Bmk1
  • Csbp1
  • Csbp2
  • Erk1
  • Erk2
  • Erk5
  • Mapk
  • Mapk1
  • Mapk11
  • Mapk14
  • Mapk3
  • Mapk7
  • Mapkapk1a
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkm1
  • Prkm3
  • Rps6ka1
  • Rps6ka2
  • Rps6ka3
  • Rps6ka5
  • Rsk1
Rattus norvegicus (Norway rat)
ERKs are inactivated
  • Bmk1
  • Dusp3
  • Dusp4
  • Dusp6
  • Dusp7
  • Erk1
  • Erk2
  • Erk5
  • Mapk
  • Mapk1
  • Mapk3
  • Mapk7
  • Mkp2
  • Mkp3
  • Mkpx
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkm1
  • Prkm3
  • Vrk3
Rattus norvegicus (Norway rat)
DARPP-32 events
  • Cdk5
  • Cdkn5
  • Dpde1
  • PSSALRE
  • Pde4a
  • Pde4b
  • Pde4c
  • Pde4d
  • Pkacb
  • Ppp1a
  • Ppp1ca
  • Ppp1r1b
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5d
  • Prkaca
  • Prkacb
  • Prkar1a
  • Prkar1b
  • Prkar2a
  • Prkar2b
Rattus norvegicus (Norway rat)
Synaptic adhesion-like molecules
  • Dlg1
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh3
  • Dlgh4
  • Flot1
  • Flot2
  • GluA1
  • GluA3
  • GluN2D
  • Glur1
  • Glur3
  • Glur4
  • Gria1
  • Gria3
  • Gria4
  • Grin1
  • Grin2a
  • Grin2b
  • Grin2c
  • Grin2d
  • Lar
  • Lrfn1
  • Lrfn2
  • Lrfn3
  • Lrfn4
  • Nmdar1
  • Psd95
  • Ptprd
  • Ptprf
  • Ptprs
  • Reg1
  • Reg2
  • Rtn3
  • Salm1
  • Salm2
  • Salm3
  • Salm4
Rattus norvegicus (Norway rat)
CREB phosphorylation
  • Atf1
  • Creb-1
  • Creb1
  • Mapkapk1a
  • Mapkapk2
  • Rps6ka1
  • Rps6ka2
  • Rps6ka3
  • Rps6ka5
  • Rsk1
Rattus norvegicus (Norway rat)
Passive transport by Aquaporins
  • Aqp1
  • Aqp10
  • Aqp11
  • Aqp12a
  • Aqp2
  • Aqp3
  • Aqp4
  • Aqp5
  • Aqp7
  • Aqp8
  • Aqp9
  • Chip28
  • LOC686596
  • Mip
Rattus norvegicus (Norway rat)
Regulation of TP53 Activity through Association with Co-factors
  • Akt1
  • Akt2
  • Akt3
  • Brn-3
  • Brn3
  • Brn3a
  • Brn3b
  • Ket
  • P53
  • P63
  • Phf20
  • Pou4f1
  • Pou4f2
  • Ppp1r13b
  • Ppp1r13l
  • Tp53
  • Tp53bp2
  • Tp63
  • Tp73
  • Tp73l
  • Trp63
  • Zfp385a
Rattus norvegicus (Norway rat)
Pentose phosphate pathway
  • Dera
  • G6pd
  • G6pdx
  • Pgd
  • Pgls
  • Pgm2
  • RBKS
  • Rbks
  • Rpe
  • Rpia
  • Taldo1
  • Tkt
Rattus norvegicus (Norway rat)
Vasopressin regulates renal water homeostasis via Aquaporins
  • Aqp1
  • Aqp2
  • Aqp3
  • Aqp4
  • Avp
  • Avpr2
  • Chip28
  • Gnas
  • Gnas1
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Myo5b
  • Pkacb
  • Prkaca
  • Prkacb
  • Prkar1a
  • Prkar1b
  • Prkar2a
  • Prkar2b
  • Rab11
  • Rab11a
  • Rab11fip2
Rattus norvegicus (Norway rat)
Class A/1 (Rhodopsin-like receptors)
  • Cmklr1
  • Cnr1
  • Cnr2
  • Dez
  • Ebi2
  • Gpbar1
  • Gpr109
  • Gpr109a
  • Gpr109b
  • Gpr132
  • Gpr18
  • Gpr183
  • Gpr35
  • Gpr39
  • Gpr4
  • Gpr55
  • Gpr65
  • Gpr68
  • Gpr80
  • Gpr91
  • Hcar2
  • Mt2
  • Mtnr1b
  • Niacr1
  • Oxgr1
  • P2y15
  • Ptafr
  • Pumag
  • Skr6
  • Sucnr1
  • Tgr5
Rattus norvegicus (Norway rat)
Ca2+ pathway
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Camk2a
  • Catnb
  • Cna2
  • Cnb
  • Ctnnb1
  • Fzd2
  • Fzd3
  • Fzd4
  • Fzd5
  • Fzd6
  • Gna0
  • Gnao
  • Gnao1
  • Gnat2
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Kras
  • Kras2
  • Lef1
  • Map3k7
  • Nfatc1
  • Nlk
  • Pde6a
  • Pde6b
  • Pde6g
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
  • Tcf7l2
  • Wnt-5a
  • Wnt11
  • Wnt5a
Rattus norvegicus (Norway rat)
Rap1 signalling
  • AABR07006724.1
  • Cgef2
  • Epac
  • Epac1
  • Epac2
  • Krev1
  • Msfs1
  • Pkacb
  • Prkaca
  • Prkacb
  • Prkg1
  • Raf
  • Raf1
  • Rap1a
  • Rap1b
  • Rap1gap
  • Rap1gap2
  • Rapgef3
  • Rapgef4
  • Rasgrp
  • Rasgrp1
  • Rasgrp2
  • Sipa1
  • Ywhab
  • Ywhaz
Rattus norvegicus (Norway rat)
Axonal growth inhibition (RHOA activation)
  • Arha
  • Arha2
  • Arhgdia
  • Lingo1
  • Mag
  • Mcf2
  • Ngfr
  • Nogo
  • Omg
  • Rhoa
  • Rtn4
  • Tnfrsf16
Rattus norvegicus (Norway rat)
Vitamin B5 (pantothenate) metabolism
  • Aasdhppt
  • Fang1
  • Fasn
  • Gda
  • Pank4
  • Pdzd11
  • Slc25a16
  • Slc25a42
  • Slc5a6
  • Smvt
  • Vnn1
Rattus norvegicus (Norway rat)
Transport of vitamins, nucleosides, and related molecules
  • Acatn
  • Pdzd11
  • Slc33a1
  • Slc5a6
  • Smvt
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

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