GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 851 - 875 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
Proton-coupled neutral amino acid transporters
  • Lyaat1
  • Pat2
  • Slc36a1
  • Slc36a2
  • Tramd1
Rattus norvegicus (Norway rat)
Sema4D induced cell migration and growth-cone collapse
  • Arha
  • Arha2
  • Arhb
  • Arhgef11
  • Arhgef12
  • Erbb2
  • Neu
  • Plxnb1
  • Rhoa
  • Rhob
  • Rnd1
  • Rock1
  • Rock2
  • Sema4d
Rattus norvegicus (Norway rat)
Insulin receptor signalling cascade
  • Ash
  • Grb10
  • Grb2
  • Ins-1
  • Ins1
  • Insr
  • Shc1
  • Sos1
Rattus norvegicus (Norway rat)
Interleukin-35 Signalling
  • Canx
  • Ebi3
  • Il12a
  • Il12rb2
  • Il6st
  • Jak1
  • Jak2
  • Stat1
  • Stat3
  • Stat4
  • Tyk2
Rattus norvegicus (Norway rat)
Nicotinamide salvaging
  • Aibp
  • Apoa1bp
  • Artd15
  • Carkd
  • Cox-2
  • Cox2
  • Cyp8
  • Cyp8b1
  • LOC120094289
  • Nampt
  • Naprt
  • Naprt1
  • Naxd
  • Naxe
  • Nnmt
  • Nudt12
  • Parp10
  • Parp14
  • Parp16
  • Parp6
  • Parp8
  • Parp9
  • Pbef1
  • Ptgis
  • Ptgs2
  • Rnls
  • Slc22a13
  • Slc5a8
Rattus norvegicus (Norway rat)
Carnitine metabolism
  • Cact
  • Cpt-1
  • Cpt-2
  • Cpt1
  • Cpt1a
  • Cpt1b
  • Cpt2
  • Mid1ip1
  • Mig12
  • Nr2b1
  • Octn2
  • Prkab2
  • Prkag2
  • Rxra
  • S14
  • Slc22a5
  • Slc25a20
  • Thrsp
Rattus norvegicus (Norway rat)
TCF dependent signaling in response to WNT
  • Axin
  • Axin1
  • Axin2
  • Catnb
  • Ctnnb1
  • LOC100360645
  • Rnf146
  • Rps27a
  • Ryk
  • Tnks
  • Tnks2
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Usp34
  • Wnt-5a
  • Wnt1
  • Wnt3
  • Wnt3a
  • Wnt5a
Rattus norvegicus (Norway rat)
Formyl peptide receptors bind formyl peptides and many other ligands
  • A4
  • AD1
  • Anx1
  • Anxa1
  • App
  • Ccl6
  • Ccl9
  • Fpr1
  • Fpr2
  • Fpr2l3
  • Hebp1
Rattus norvegicus (Norway rat)
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • Ash
  • Blnk
  • Btk
  • Cd19
  • Cd22
  • Cd79a
  • Cd79b
  • Dapp1
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Grb2
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • Insp3r
  • Itpr1
  • Itpr2
  • Itpr3
  • LOC100361758
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Nck1
  • Pik3ap1
  • Pik3cd
  • Pik3r1
  • Plcg2
  • Ptph6
  • Ptpn6
  • RGD1561722
  • RGD1564696
  • Ruk
  • Seta
  • Sh3kbp1
  • Sim
  • Sos1
  • Stim1
  • Syk
  • Trp1
  • Trpc1
  • Vav
  • Vav1
Rattus norvegicus (Norway rat)
Highly sodium permeable postsynaptic acetylcholine nicotinic receptors
  • Achre
  • Achrg
  • Acra3
  • Acra4
  • Acrb2
  • Acrb4
  • Acrd
  • Chrna3
  • Chrna4
  • Chrnb2
  • Chrnb4
  • Chrnd
  • Chrne
  • Chrng
Rattus norvegicus (Norway rat)
SHC1 events in EGFR signaling
  • Areg
  • Ash
  • Btc
  • Dtr
  • Egf
  • Egfr
  • Ereg
  • Grb2
  • Hbegf
  • Hegfl
  • Hras
  • Hras1
  • Kras
  • Kras2
  • Nras
  • Sdgf
  • Shc1
  • Sos1
  • Tgfa
Rattus norvegicus (Norway rat)
Chylomicron clearance
  • Apob
  • Apoe
  • Arh
  • Ldlr
  • Ldlrap1
  • Lipc
Rattus norvegicus (Norway rat)
Collagen chain trimerization
  • Col10a1
  • Col11a1
  • Col11a2
  • Col13a1
  • Col14a1
  • Col15a1
  • Col16a1
  • Col17a1
  • Col18a1
  • Col19a1
  • Col1a1
  • Col1a2
  • Col20a1
  • Col22a1
  • Col23a1
  • Col25a1
  • Col26a1
  • Col28a1
  • Col2a1
  • Col3a1
  • Col4a1
  • Col4a2
  • Col4a3
  • Col4a4
  • Col4a5
  • Col4a6
  • Col5a1
  • Col5a2
  • Col5a3
  • Col7a1
  • Col8a1
  • Col8a2
  • LOC100909752
  • LOC100911572
  • LOC687064
  • RGD1564680
Rattus norvegicus (Norway rat)
Erythrocytes take up carbon dioxide and release oxygen
  • Ae1
  • Aqp1
  • Ca1
  • Ca2
  • Ca4
  • Car1
  • Chip28
  • Cyb5r1
  • Cyb5r2
  • Cyb5r4
  • Cyb5rl
  • Hba-a1
  • Hba1
  • Hbb
  • Ncb5or
  • Rh50
  • Rhag
  • Slc4a1
Rattus norvegicus (Norway rat)
HSP90 chaperone cycle for SHRs
  • AABR07000222.1
  • Actr10
  • Actr1a
  • Ar
  • Capza1
  • Capza2
  • Capza3
  • Capzb
  • Ctrn1
  • Dctn1
  • Dctn2
  • Dctn3l1
  • Dctn4
  • Dctn5
  • Dctn6
  • Dhc1
  • Dlc2
  • Dnaja1
  • Dnaja2
  • Dnaja4
  • Dnajb1
  • Dnch1
  • Dnchc1
  • Dnci1
  • Dnci2
  • Dncic1
  • Dncic2
  • Dncl1
  • Dnclc1
  • Dncli1
  • Dncli2
  • Dnec1
  • Dyhc
  • Dync1h1
  • Dync1i1
  • Dync1i2
  • Dync1li1
  • Dync1li2
  • Dynll1
  • Dynll2
  • Fkbp4
  • Fkbp5
  • Fkbp52
  • Grl
  • Hop
  • Hsc70
  • Hsc73
  • Hsj2
  • Hsp70-1
  • Hsp70-2
  • Hsp70-3
  • Hsp84
  • Hsp86
  • Hsp90aa1
  • Hsp90ab1
  • Hspa1
  • Hspa1a
  • Hspa1b
  • Hspa1l
  • Hspa2
  • Hspa8
  • Hspc3
  • Hspca
  • Hspcb
  • Hst70
  • Map1c
  • Mlr
  • Nr3c1
  • Nr3c2
  • Nr3c3
  • Nr3c4
  • Pgr
  • Pin
  • Ptges3
  • Rdj1
  • Stip1
  • Tebp
Rattus norvegicus (Norway rat)
TWIK related potassium channel (TREK)
  • Kcnk10
  • Kcnk2
  • Kcnk4
  • Trek
  • Trek2
Rattus norvegicus (Norway rat)
PI-3K cascade:FGFR3
  • Ash
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf2
  • Fgf20
  • Fgf23
  • Fgf4
  • Fgf5
  • Fgf7a
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr3
  • Frs2
  • Gab1
  • Grb2
  • Pik3ca
  • Pik3r1
  • Ptpn11
Rattus norvegicus (Norway rat)
Beta-oxidation of pristanoyl-CoA
  • Acot8
  • Acox2
  • Acox3
  • Acoxl
  • Amacr
  • Cot
  • Crat
  • Crot
  • Edh17b4
  • Hsd17b4
  • Prcox
  • Pte1
  • Scp-2
  • Scp2
  • Thcox
Rattus norvegicus (Norway rat)
Cellular response to mitochondrial stress
  • Bcap37
  • Dele
  • Dele1
  • Eif2a
  • Eif2ak1
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Hri
  • Oma1
  • Phb2
  • Stoml2
  • Yme1l1
Rattus norvegicus (Norway rat)
Endosomal Sorting Complex Required For Transport (ESCRT)
  • Chmp2a
  • Chmp2b
  • Chmp3
  • Chmp4b
  • Chmp4c
  • Chmp5
  • Chmp6
  • Chmp7
  • Eap20
  • Eap30
  • Eap45
  • Fam125a
  • Hgs
  • Hrs
  • Hrs2
  • LOC100360645
  • Mvb12a
  • Mvb12b
  • NEWGENE_1309258
  • Rps27a
  • Snf8
  • Stam
  • Stam2
  • Tsg101
  • Uba80
  • Ubap1
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vps24
  • Vps25
  • Vps28
  • Vps36
  • Vps37b
  • Vps37c
  • Vps37d
  • Vps4a
  • Vps4b
  • Vta1
  • vps4-A
Rattus norvegicus (Norway rat)
NTRK2 activates RAC1
  • Bdnf
  • Dock3
  • Fyn
  • Ntrk2
  • Rac
  • Rac1
  • Trkb
Rattus norvegicus (Norway rat)
ERBB2 Regulates Cell Motility
  • Arha
  • Arha2
  • Btc
  • Diap1
  • Diaph1
  • Dtr
  • Egf
  • Egfr
  • Erbb2
  • Erbb3
  • Ereg
  • Hbegf
  • Hegfl
  • Memo1
  • Ndf
  • Neu
  • Nrg1
  • Nrg2
  • Nrg3
  • Ntak
  • Rhoa
Rattus norvegicus (Norway rat)
Alternative complement activation
  • C3
Rattus norvegicus (Norway rat)
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex
  • Ccnb1
  • Cdc2
  • Cdc25c
  • Cdc2a
  • Cdk1
  • Cdkn1
  • Msfs1
  • Sfn
  • Wee1
  • Ywhab
  • Ywhae
  • Ywhag
  • Ywhah
  • Ywhaq
  • Ywhaz
Rattus norvegicus (Norway rat)
Axonal growth stimulation
  • Arha
  • Arha2
  • Arhgdia
  • Ngf
  • Ngfb
  • Ngfr
  • Rhoa
  • Tnfrsf16
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024