GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 901 - 925 of 1070 in total
Pathway Name ▲ Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Sphingolipid catabolism
  • Acer1
  • Acer2
  • Acer3
  • Aldh3a2
  • Aldh3b1
  • Aldh3b2
  • Aldh4
  • Lpp1
  • Lpp2
  • Lpp3
  • Plpp1
  • Plpp2
  • Plpp3
  • Ppap2a
  • Ppap2b
  • Ppap2c
  • Sgpl1
  • Sgpp1
  • Sgpp2
  • Spl
Rattus norvegicus (Norway rat)
Sphingolipid de novo biosynthesis
  • Abcc1
  • Abcg2
  • Bcrp1
  • Cers2
  • Cers3
  • Cers4
  • Cers5
  • Cers6
  • Cyb5b
  • Cyb5m
  • Degs
  • Degs1
  • Degs2
  • Des1
  • Des2
  • Fa2h
  • Faah
  • Kdsr
  • Lass2
  • Lass3
  • Lcb1
  • Lcb2
  • Mfsd2b
  • Mob
  • Mrp1
  • Omb5
  • Ormdl1
  • Ormdl2
  • Ormdl3
  • Pomt2
  • Samd8
  • Sgms1
  • Sgms2
  • Sphk1
  • Spns2
  • Sptlc1
  • Sptlc2
  • Sptlc3
  • Sptssa
  • Ssspta
  • Tmem23
Rattus norvegicus (Norway rat)
Spry regulation of FGF signaling
  • Ash
  • Braf
  • Cbl
  • Erk1
  • Erk2
  • Grb2
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Mknk1
  • Mnk1
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Spry2
  • Src
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Stabilization of p53
  • Atm
  • LOC100360645
  • Mdm2
  • Mdm4
  • Mdmx
  • P53
  • Phf20
  • Rps27a
  • Tp53
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Stimuli-sensing channels
  • Accn1
  • Accn2
  • Accn3
  • Accn4
  • Accn5
  • Ano1
  • Ano10
  • Ano2
  • Ano3
  • Ano4
  • Ano5
  • Ano6
  • Ano7
  • Ano8
  • Ano9
  • Asic1
  • Asic2
  • Asic3
  • Asic4
  • Asic5
  • Asph
  • Best1
  • Best2
  • Best3
  • Best4
  • Blinac
  • Bnac1
  • Bnac2
  • Bsnd
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Cisk
  • Clca1
  • Clca2
  • Clca4
  • Clca6
  • Clcn1
  • Clcn2
  • Clcn4
  • Clcn4-2
  • Clcn5
  • Clcn6
  • Clcn7
  • Clcnk1
  • Clcnka
  • Clcnkb
  • Clic2
  • Drasic
  • Fkbp1b
  • LOC100360645
  • LOC689103
  • Mdeg
  • Nalcn
  • Nca
  • Nedd4l
  • Ngep
  • Ostm1
  • Prp3
  • Raf
  • Raf1
  • Rb21
  • Renac
  • Rps27a
  • Ryr1
  • Ryr2
  • Scnn1a
  • Scnn1b
  • Scnn1g
  • Sgk
  • Sgk1
  • Sgk2
  • Sgk3
  • Sgkl
  • Slc17a3
  • Spasic
  • Sri
  • Stom
  • Stoml3
  • Tmem16g
  • Tpc1
  • Tpcn1
  • Tpcn2
  • Trdn
  • Ttyh1
  • Ttyh2
  • Ttyh3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Unc79
  • Unc80
  • Vgcnl1
  • Wwp1
Rattus norvegicus (Norway rat)
Striated Muscle Contraction
  • Actn2
  • Actn3
  • Alpha-tm
  • Ctni
  • Des
  • Dmd
  • Fang2
  • Mlc1v
  • Mlc2
  • Mybpc2
  • Mybpc3
  • Myh3
  • Myh6
  • Myl1
  • Myl2
  • Myl3
  • Myl4
  • Neb
  • Ntmod
  • Tcap
  • Tmod
  • Tmod1
  • Tmod2
  • Tmod3
  • Tmod4
  • Tni
  • Tnnc1
  • Tnnc2
  • Tnni1
  • Tnni2
  • Tnni3
  • Tnnt1
  • Tnnt2
  • Tnnt3
  • Tpm1
  • Tpm2
  • Tpm4
  • Tpma
  • Trp1
  • Vim
Rattus norvegicus (Norway rat)
Succinyl-CoA Biosynthesis
  • AC132020.1
  • Dld
  • Dlst
  • Kgd4
  • Mrps36
  • Ogdh
  • Ogdhl
Rattus norvegicus (Norway rat)
Sulfur amino acid metabolism
  • Ahcy
  • Ams1
  • Bhmt
  • Bhmt2
  • Mat1a
  • Mtr
  • Mtrr
Rattus norvegicus (Norway rat)
Surfactant metabolism
  • Abca3
  • Adgrf5
  • Adora2a
  • Adora2b
  • Adra2a
  • Adra2c
  • Ccdc59
  • Ckap4
  • Ctsh
  • Gata6
  • Gpr116
  • Gprhep
  • Lmcd1
  • Napsa
  • P2ru1
  • P2ry2
  • Sftp-1
  • Sftp1
  • Sftp2
  • Sftp3
  • Sftp4
  • Sftpa
  • Sftpa1
  • Sftpb
  • Sftpc
  • Sftpd
  • Slc17a2
  • Slc34a1
  • Slc34a2
  • Srec
  • Ttf1
  • Zdhhc2
Rattus norvegicus (Norway rat)
Switching of origins to a post-replicative state
  • Cdt1
  • Gmnn
Rattus norvegicus (Norway rat)
Synaptic adhesion-like molecules
  • Dlg1
  • Dlg3
  • Dlg4
  • Dlgh1
  • Dlgh3
  • Dlgh4
  • Flot1
  • Flot2
  • GluA1
  • GluA3
  • GluN2D
  • Glur1
  • Glur3
  • Glur4
  • Gria1
  • Gria3
  • Gria4
  • Grin1
  • Grin2a
  • Grin2b
  • Grin2c
  • Grin2d
  • Lar
  • Lrfn1
  • Lrfn2
  • Lrfn3
  • Lrfn4
  • Nmdar1
  • Psd95
  • Ptprd
  • Ptprf
  • Ptprs
  • Reg1
  • Reg2
  • Rtn3
  • Salm1
  • Salm2
  • Salm3
  • Salm4
Rattus norvegicus (Norway rat)
Syndecan interactions
  • Fgf-2
  • Fgf2
  • Hspg1
  • Itga2
  • Itga6
  • Itgav
  • Itgb1
  • Itgb3
  • Itgb4
  • Itgb5
  • Pkca
  • Prkca
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Synd1
  • Synd2
  • Synd3
  • Synd4
  • Tgfb1
  • Vtn
Rattus norvegicus (Norway rat)
Synthesis of (16-20)-hydroxyeicosatetraenoic acids (HETE)
  • Cyp1a-1
  • Cyp1a-2
  • Cyp1a1
  • Cyp1a2
  • Cyp1b1
  • Cyp2c66
  • Cyp2u1
  • Cyp4a-8
  • Cyp4a12
  • Cyp4a8
  • Cyp4f4
  • LOC100912265
Rattus norvegicus (Norway rat)
Synthesis of 12-eicosatetraenoic acid derivatives
  • Alox12
  • Alox12b
  • Alox12l
  • Alox15
  • Aloxe3
  • Gpx1
  • Gpx2
  • Gpx4
Rattus norvegicus (Norway rat)
Synthesis of 15-eicosatetraenoic acid derivatives
  • Alox12l
  • Alox15
  • Alox15b
  • Cox-2
  • Cox2
  • Gpx1
  • Gpx2
  • Gpx4
  • Ptgs2
Rattus norvegicus (Norway rat)
Synthesis of 5-eicosatetraenoic acids
  • Alox5
  • Alox5ap
  • Flap
  • Ltc4s
  • Pon
  • Pon1
  • Pon2
  • Pon3
Rattus norvegicus (Norway rat)
Synthesis of IP2, IP, and Ins in the cytosol
  • Aldrl6
  • Imp
  • Impa1
  • Impa2
  • Ino1
  • Inpp1
  • Inpp4a
  • Inpp4b
  • Inpp5a
  • Inpp5b
  • Inpp5j
  • Isyna1
  • Ksp32
  • Miox
  • Ocrl
  • Pib5pa
  • Pipp
  • Rsor
  • Synj1
Rattus norvegicus (Norway rat)
Synthesis of IP3 and IP4 in the cytosol
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Inpp5b
  • Inpp5d
  • Inpp5j
  • Inppl1
  • Ip3kc
  • Itpk1
  • Itpka
  • Itpkb
  • Itpkc
  • Ocrl
  • Pib5pa
  • Pipp
  • Plcb1
  • Plcb2
  • Plcb3
  • Plcb4
  • Plcd1
  • Plcd3
  • Plcd4
  • Plce
  • Plce1
  • Plcg1
  • Plcg2
  • Plch1
  • Plch2
  • Plcz1
  • Pld4
  • Pten
  • Ship
  • Ship1
  • Ship2
  • Synj1
Rattus norvegicus (Norway rat)
Synthesis of IPs in the ER lumen
  • Minpp1
Rattus norvegicus (Norway rat)
Synthesis of Ketone Bodies
  • Aacs
  • Acat1
  • Acss3
  • Bdh
  • Bdh1
  • Bdh2
  • Dhrs6
  • Hmgcl
  • Hmgcll1
  • Hmgcs2
Rattus norvegicus (Norway rat)
Synthesis of Leukotrienes (LT) and Eoxins (EX)
  • Abcc1
  • Alox12l
  • Alox15
  • Alox5
  • Alox5ap
  • Cyp4a-1
  • Cyp4a-2
  • Cyp4a-3
  • Cyp4a-8
  • Cyp4a1
  • Cyp4a10
  • Cyp4a11
  • Cyp4a12
  • Cyp4a14
  • Cyp4a2
  • Cyp4a3
  • Cyp4a8
  • Cyp4b-1
  • Cyp4b1
  • Cyp4f-1
  • Cyp4f1
  • Cyp4f18
  • Cyp4f2
  • Cyp4f3
  • Cyp4f4
  • Cyp4f40
  • Dpep1
  • Dpep2
  • Dpep3
  • Flap
  • Ggt
  • Ggt1
  • Ggt5
  • Ggtla1
  • Lta4h
  • Ltc4s
  • Mapkapk2
  • Mrp1
  • Rdp
Rattus norvegicus (Norway rat)
Synthesis of PA
  • Acp6
  • Agpat1
  • Agpat2
  • Agpat3
  • Agpat4
  • Agpat5
  • Agpat6
  • Agpat9
  • Alpi
  • Aytl2
  • Cpla2
  • Ddhd1
  • Ddhd2
  • Gnpat
  • Gpam
  • Gpat1
  • Gpat2
  • Gpat3
  • Gpat4
  • Gpd1
  • Gpd1l
  • Gpd1l1
  • Gpd2
  • Lclat1
  • Liph
  • Lipi
  • Lpcat1
  • Lpcat4
  • Miga1
  • Miga2
  • Pla2g10
  • Pla2g12a
  • Pla2g1b
  • Pla2g2a
  • Pla2g2d
  • Pla2g2f
  • Pla2g4
  • Pla2g4a
  • Pla2g4b
  • Pla2g4d
  • Pla2g5
  • Pla2r1
  • Pld1
  • Pld2
  • Pld6
  • ddhd2
Rattus norvegicus (Norway rat)
Synthesis of PC
  • Abhd3
  • Aytl2
  • Cctb
  • Cd92
  • Cdw92
  • Cept1
  • Chat
  • Chetk
  • Chk
  • Chka
  • Chkb
  • Chkl
  • Chpt1
  • Ck2n
  • Ckr
  • Cpt1
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Ctl1
  • Ctl2
  • Ctl3
  • Ctl4
  • Ctpct
  • Lpcat1
  • Lpin1
  • Lpin2
  • Lpin3
  • Mfsd2a
  • Ng22
  • Pctp
  • Pcyt1
  • Pcyt1a
  • Pcyt1b
  • Pempt
  • Pemt
  • Phospho1
  • Slc44a1
  • Slc44a2
  • Slc44a3
  • Slc44a4
  • Slc44a5
  • Stard10
  • Stard2
  • Stard7
  • TPPT1
Rattus norvegicus (Norway rat)
Synthesis of PE
  • Cept1
  • Chetk
  • Chk
  • Chka
  • Chkb
  • Chkl
  • Ckr
  • Ept1
  • Etnk1
  • Etnk2
  • Etnppl
  • LOC687071
  • Lpin1
  • Lpin2
  • Lpin3
  • Pcyt2
  • Phospho1
  • Selenoi
Rattus norvegicus (Norway rat)
Synthesis of PI
  • Cdipt
  • Cds
  • Cds1
  • Nir2
  • Pis1
  • Pitpnm
  • Pitpnm1
  • Pitpnm2
  • Pitpnm3
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024