GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 1 - 25 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▼
Galactose catabolism
  • Gale
  • Galk1
  • Galt
  • Pgm1
Rattus norvegicus (Norway rat)
GDP-fucose biosynthesis
  • Fcsk
  • Fpgt
  • Fuk
  • Fuom
  • Gfus
  • Gmds
  • Slc35c1
  • Tsta3
Rattus norvegicus (Norway rat)
N-Glycan antennae elongation
  • B4galt2
  • B4galt3
  • B4galt4
  • B4galt5
  • B4galt6
  • Mgat4a
  • Mgat4b
  • Mgat4c
  • Mgat5
  • Siat1
  • Siat4c
  • Siat8b
  • St3gal4
  • St6gal1
  • St8sia2
  • St8sia3
  • Stx
Rattus norvegicus (Norway rat)
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
  • Man1a1
  • Man1a2
  • Man1c1
Rattus norvegicus (Norway rat)
Reactions specific to the complex N-glycan synthesis pathway
  • Chst10
  • Fuca
  • Fuca1
  • Fut8
  • Gnt2
  • Man2a1
  • Man2a2
  • Mana2
  • Mgat2
Rattus norvegicus (Norway rat)
Regulation of Glucokinase by Glucokinase Regulatory Protein
  • Aaas
  • Gck
  • Gckr
  • Gp210
  • LOC683983
  • Mrnp41
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Pcnt1
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Sec13
  • Sec13l1
  • Tmem48
  • Tpr
Rattus norvegicus (Norway rat)
Fructose biosynthesis
  • Akr1b1
  • Akr1b4
  • Aldr1
  • Sdh1
  • Sord
Rattus norvegicus (Norway rat)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
  • Cd26
  • Dpp4
  • Ffar1
  • Ffar4
  • Gcg
  • Gpr119
  • Gpr120
  • Gpr40
  • Grp
  • Lep
  • O3far1
  • Ob
Rattus norvegicus (Norway rat)
N-glycan trimming and elongation in the cis-Golgi
  • Gnt1
  • Manea
  • Mgat1
Rattus norvegicus (Norway rat)
Sensory perception of sweet, bitter, and umami (glutamate) taste
  • Gnat-3
  • Gnat3
  • Gnb1
  • Gnb3
  • Gpr70
  • Gpr71
  • Itpr3
  • T1r1
  • T1r2
  • T1r3
  • T2r16
  • T2r17
  • T2r18
  • T2r20
  • T2r38
  • Tas1r1
  • Tas1r2
  • Tas1r3
  • Tas2r1
  • Tas2r106
  • Tas2r108
  • Tas2r118
  • Tas2r119
  • Tas2r12
  • Tas2r120
  • Tas2r121
  • Tas2r126
  • Tas2r13
  • Tas2r130
  • Tas2r136
  • Tas2r137
  • Tas2r138
  • Tas2r139
  • Tas2r140
  • Tas2r144
  • Tas2r16
  • Tas2r18
  • Tas2r19
  • Tas2r26
  • Tas2r3
  • Tas2r31
  • Tas2r32
  • Tas2r38
  • Tas2r39
  • Tas2r4
  • Tas2r40
  • Tas2r41
  • Tas2r6
  • Tas2r7
  • Tr1
  • Tr2
  • Tr3
Rattus norvegicus (Norway rat)
Glycogen breakdown (glycogenolysis)
  • AABR07037995.1
  • Agl
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Gaa
  • Gyg
  • Gyg1
  • Lgp
  • Pgm1
  • Phka1
  • Phka2
  • Phkb
  • Phkg
  • Phkg1
  • Phkg2
  • Pygl
  • Pygm
Rattus norvegicus (Norway rat)
Glycolysis
  • Adpgk
  • Aldoa
  • Aldob
  • Aldoc
  • Bpgm
  • ENSRNOG00000066746
  • Eno-2
  • Eno-3
  • Eno2
  • Eno3
  • Eno4
  • Gapd
  • Gapd-s
  • Gapdh
  • Gapdhs
  • Gapds
  • Gck
  • Gnpda1
  • Gnpda2
  • Gpi
  • Hk1
  • Hk2
  • Hk3
  • Hkdc1
  • LOC100362738
  • Pfk-l
  • Pfk-m
  • Pfkc
  • Pfkl
  • Pfkm
  • Pfkp
  • Pgam1
  • Pgam2
  • Pgk-1
  • Pgk1
  • Pgk2
  • Pgm2l1
  • Pklr
  • Pkml1
  • RGD1563601
  • Tpi1
  • Tpi1l2
Rattus norvegicus (Norway rat)
Lactose synthesis
  • Glut1
  • Slc2a1
Rattus norvegicus (Norway rat)
Synthesis, secretion, and deacylation of Ghrelin
  • Bche
  • Bdp
  • Gcg
  • Gh
  • Gh1
  • Ghrl
  • Goat
  • Igf-1
  • Igf1
  • Ins-1
  • Ins1
  • Lep
  • Mboat4
  • Nec-1
  • Nec1
  • Ob
  • Pcsk1
  • Sec11a
  • Sec11c
  • Sec11l1
  • Sec11l3
  • Spc18
  • Spc21
  • Spcs1
  • Spcs2
  • Spcs3
Rattus norvegicus (Norway rat)
G alpha (i) signalling events
  • 5ht1b
  • 5ht1f
  • 5ht5a
  • A4
  • AD1
  • Acc1
  • Ackr3
  • Adora1
  • Adora3
  • Adra2a
  • Adra2b
  • Adra2c
  • Ags3
  • Agt
  • Agtr2
  • Agtrl1
  • Anx1
  • Anxa1
  • Apel
  • Apj
  • Apln
  • Aplnr
  • App
  • B1bkr
  • Bcp
  • Bdkrb1
  • Bdkrb2
  • Bkr
  • Blr1
  • C3
  • C3ar1
  • C5
  • C5ar1
  • C5r1
  • Casr
  • Ccl1
  • Ccl11
  • Ccl19
  • Ccl20
  • Ccl25
  • Ccl27
  • Ccl4
  • Ccl5
  • Ccl6
  • Ccl9
  • Ccr10
  • Ccr1l1
  • Ccr3
  • Ccr4
  • Ccr5
  • Ccr6
  • Ccr7
  • Ccr8
  • Ccr9
  • Chrm-2
  • Chrm-4
  • Chrm2
  • Chrm4
  • Cinc1
  • Cinc2
  • Cinc3
  • Cmkar4
  • Cmkbr3
  • Cmkbr5
  • Cmkor1
  • Cmkrl2
  • Cnr1
  • Cnr2
  • Crth2
  • Cx3cl1
  • Cx3cr1
  • Cxcl1
  • Cxcl10
  • Cxcl11
  • Cxcl12
  • Cxcl13
  • Cxcl16
  • Cxcl2
  • Cxcl3
  • Cxcl4
  • Cxcl5
  • Cxcl9
  • Cxcr1
  • Cxcr2
  • Cxcr3
  • Cxcr4
  • Cxcr5
  • Cxcr6
  • Cxcr7
  • Drd3
  • Drd4
  • Ebi2
  • Edg2
  • Edg5
  • Edg7
  • Edg8
  • Etbrlp2
  • Fkn
  • Fpr1
  • Fpr2
  • Fpr2l3
  • Gabbr1
  • Gabbr2
  • Gaip
  • Gal
  • Galn
  • Galnr
  • Galnr1
  • Galnr2
  • Galnr3
  • Galr1
  • Galr2
  • Galr3
  • Gcp
  • Gnai-1
  • Gnai-2
  • Gnai-3
  • Gnai1
  • Gnai2
  • Gnai3
  • Gnat-3
  • Gnat1
  • Gnat2
  • Gnat3
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Gpcr91
  • Gper
  • Gper1
  • Gpr105
  • Gpr109
  • Gpr109a
  • Gpr109b
  • Gpr17
  • Gpr18
  • Gpr183
  • Gpr24
  • Gpr30
  • Gpr37
  • Gpr37l1
  • Gpr41
  • Gpr44
  • Gpr51
  • Gpr55
  • Gpr66
  • Gpr7
  • Gpr70
  • Gpr71
  • Gpr80
  • Gpr91
  • Gprc1b
  • Gprc1c
  • Gprc1d
  • Gprc1f
  • Gprc1g
  • Gprc1h
  • Gprc2a
  • Gpsm1
  • Gpsm2
  • Gpsm3
  • Grm2
  • Grm3
  • Grm4
  • Grm6
  • Grm7
  • Grm8
  • Gro
  • Hcar1
  • Hcar2
  • Hebp1
  • Hrh4
  • Htr1b
  • Htr1d
  • Htr1f
  • Htr5a
  • Il8ra
  • Il8rb
  • Inp10
  • Insl7
  • Kng
  • Kng1
  • Lpa1
  • Lpa3
  • Lpar1
  • Lpar2
  • Lpar3
  • Lpar5
  • Mch
  • Mchr1
  • Mglur2
  • Mglur3
  • Mglur4
  • Mglur6
  • Mglur7
  • Mglur8
  • Mig
  • Mip-2
  • Mip1b
  • Mip2
  • Mob1
  • Mt2
  • Mtnr1b
  • Niacr1
  • Nms
  • Nmu
  • Nmur1
  • Nmur2
  • Npb
  • Npbwr1
  • Npw
  • Npy
  • Npy1r
  • Npy4r
  • Npy5r
  • Npyr5
  • Nrg1
  • Oor
  • Opn1mw
  • Opn1sw
  • Opn3
  • Opn5
  • Oprd1
  • Oprk1
  • Oprl
  • Oprl1
  • Oprm1
  • Oxgr1
  • P2ry12
  • P2ry13
  • P2ry14
  • P2ry4
  • P2y12
  • P2y15
  • P2y4
  • Pcar1
  • Pcp2
  • Pdyn
  • Penk
  • Penk-rs
  • Penk1
  • Pf4
  • Pmch
  • Pnoc
  • Pomc
  • Pomc2
  • Ppl8
  • Ppy
  • Ppyr1
  • Psap
  • Ptgdr2
  • Ptger3
  • Pumag
  • Pyy
  • Rbs11
  • Rdc1
  • Rgr
  • Rgs1
  • Rgs12
  • Rgs13
  • Rgs14
  • Rgs16
  • Rgs17
  • Rgs18
  • Rgs19
  • Rgs20
  • Rgs21
  • Rgs3
  • Rgs4
  • Rgs5
  • Rgs7
  • Rgs8
  • Rgs9
  • Rgsr
  • Rho
  • Rln3
  • Ror-a
  • Ror-b
  • Ror-d
  • Rrh
  • S1pr2
  • S1pr3
  • S1pr4
  • S1pr5
  • Scya11
  • Scya20
  • Scya4
  • Scya5
  • Scyb1
  • Scyb10
  • Scyb2
  • Scyb4
  • Scyb5
  • Scyd1
  • Serpina8
  • Sgp1
  • Skr6
  • Slc1
  • Smst
  • Src
  • Sst
  • Sstr1
  • Sstr2
  • Sstr3
  • Sstr4
  • Sstr5
  • St38
  • Sucnr1
  • T1r1
  • T1r2
  • T1r3
  • T2r16
  • T2r17
  • T2r18
  • T2r20
  • T2r38
  • Tas1r1
  • Tas1r2
  • Tas1r3
  • Tas2r1
  • Tas2r106
  • Tas2r108
  • Tas2r118
  • Tas2r119
  • Tas2r12
  • Tas2r120
  • Tas2r121
  • Tas2r126
  • Tas2r13
  • Tas2r130
  • Tas2r135
  • Tas2r136
  • Tas2r137
  • Tas2r138
  • Tas2r139
  • Tas2r140
  • Tas2r144
  • Tas2r145
  • Tas2r16
  • Tas2r18
  • Tas2r19
  • Tas2r26
  • Tas2r28
  • Tas2r3
  • Tas2r31
  • Tas2r32
  • Tas2r38
  • Tas2r39
  • Tas2r4
  • Tas2r40
  • Tas2r41
  • Tas2r6
  • Tas2r7
  • Tgr1
  • Tr1
  • Tr2
  • Tr3
Rattus norvegicus (Norway rat)
Regulation of insulin secretion
  • Abcc8
  • Cach2
  • Cach3
  • Cach4
  • Cach6
  • Cacn2
  • Cacn3
  • Cacn4
  • Cacna1a
  • Cacna1c
  • Cacna1d
  • Cacna1e
  • Cacna2d2
  • Cacnb2
  • Cacnb3
  • Cacnl1a1
  • Cacnl1a2
  • Cacnl1a4
  • Cacnl1a6
  • Cacnlb2
  • Cacnlb3
  • Cchl1a1
  • Cchl1a2
  • Cgef2
  • Epac
  • Epac1
  • Epac2
  • Glut1
  • Glut2
  • Kcnj11
  • Pkacb
  • Prkaca
  • Prkacb
  • Rapgef3
  • Rapgef4
  • Slc2a1
  • Slc2a2
  • Sur
  • Sur1
Rattus norvegicus (Norway rat)
Gluconeogenesis
  • Aldoa
  • Aldob
  • Aldoc
  • ENSRNOG00000066746
  • Eno-2
  • Eno-3
  • Eno2
  • Eno3
  • Eno4
  • Fbp
  • Fbp1
  • Fbp2
  • G6pc
  • G6pc1
  • G6pc3
  • G6pt
  • Gapd
  • Gapd-s
  • Gapdh
  • Gapdhs
  • Gapds
  • Gpi
  • Pc
  • Pck1
  • Pck2
  • Pgam1
  • Pgam2
  • Pgk-1
  • Pgk1
  • Pgk2
  • RGD1563601
  • Slc37a1
  • Slc37a2
  • Slc37a4
  • Tpi1
  • Tpi1l2
Rattus norvegicus (Norway rat)
Class C/3 (Metabotropic glutamate/pheromone receptors)
  • Casr
  • Gabbr1
  • Gabbr2
  • Gpr51
  • Gpr70
  • Gpr71
  • Gprc1a
  • Gprc1b
  • Gprc1c
  • Gprc1d
  • Gprc1e
  • Gprc1f
  • Gprc1g
  • Gprc1h
  • Gprc2a
  • Gprc6a
  • Grm1
  • Grm2
  • Grm3
  • Grm4
  • Grm5
  • Grm6
  • Grm7
  • Grm8
  • Mglur1
  • Mglur2
  • Mglur3
  • Mglur4
  • Mglur5
  • Mglur6
  • Mglur7
  • Mglur8
  • Pcar1
  • T1r1
  • T1r2
  • T1r3
  • T2r16
  • T2r17
  • T2r18
  • T2r20
  • T2r38
  • Tas1r1
  • Tas1r2
  • Tas1r3
  • Tas2r1
  • Tas2r106
  • Tas2r108
  • Tas2r118
  • Tas2r119
  • Tas2r12
  • Tas2r120
  • Tas2r121
  • Tas2r126
  • Tas2r13
  • Tas2r130
  • Tas2r135
  • Tas2r136
  • Tas2r137
  • Tas2r138
  • Tas2r139
  • Tas2r140
  • Tas2r144
  • Tas2r145
  • Tas2r16
  • Tas2r18
  • Tas2r19
  • Tas2r26
  • Tas2r28
  • Tas2r3
  • Tas2r31
  • Tas2r32
  • Tas2r38
  • Tas2r39
  • Tas2r4
  • Tas2r40
  • Tas2r41
  • Tas2r6
  • Tas2r7
  • Tr1
  • Tr2
  • Tr3
Rattus norvegicus (Norway rat)
Intestinal hexose absorption
  • Glut2
  • Glut5
  • Sglt1
  • Slc2a2
  • Slc2a5
  • Slc5a1
Rattus norvegicus (Norway rat)
Digestion of dietary carbohydrate
  • Chia
  • Chit1
  • LOC120100609
  • Lct
  • Lph
  • Si
Rattus norvegicus (Norway rat)
Cellular hexose transport
  • Fgf21
  • GLUT7
  • Glut1
  • Glut2
  • Glut3
  • Glut4
  • Glut8
  • Glutx1
  • Mfsd4b
  • Mfsd4b1
  • RGD1559971
  • RGD1561777
  • Rag1ap1
  • Rga
  • Sglt1
  • Sglt2
  • Slc2a1
  • Slc2a10
  • Slc2a12
  • Slc2a2
  • Slc2a3
  • Slc2a4
  • Slc2a7
  • Slc2a8
  • Slc2a9
  • Slc45a3
  • Slc50a1
  • Slc5a1
  • Slc5a10
  • Slc5a2
  • Slc5a4
  • Slc5a9
Rattus norvegicus (Norway rat)
Antimicrobial peptides
  • Bpi
  • Bpifa1
  • Bpifa2
  • Bpifb1
  • Bpifb2
  • Bpifb4
  • Bpifb6
  • Camp
  • Chga
  • Clu
  • Ctsg
  • Ear1
  • Elane
  • Eppin
  • Itln1
  • LOC100361909
  • LOC100365995
  • LOC102554637
  • LOC299567
  • LOC474169
  • LOC683849
  • Leap2
  • Lplunc1
  • Lplunc4
  • Ltf
  • Lyz
  • Lyz1
  • Pap
  • Pap1
  • Pap2
  • Pap3
  • Pglyrp
  • Pglyrp1
  • Pglyrp2
  • Pglyrp4
  • Pgrp
  • Pla2g2a
  • Plunc
  • Prss1
  • Prss2
  • Prss2l1
  • Prss3
  • Prtn3
  • Psp
  • R15
  • Raf1
  • Raf4
  • Reg2
  • Reg3
  • Reg3a
  • Reg3b
  • Reg3g
  • Rnase2
  • Rnase6
  • Ry2g5
  • Spinlw1
  • Stath
  • Svs3b
  • Trp1
  • Try1
  • Try10
  • Try2
  • Try4
  • Try5
  • Tryp1
Rattus norvegicus (Norway rat)
Ficolins bind to repetitive carbohydrate structures on the target cell surface
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
Rattus norvegicus (Norway rat)
Initial triggering of complement
  • AABR07034730.2
  • AABR07060971.1
  • AABR07061001.1
  • AABR07065782.1
  • AABR07065808.1
  • AABR07065812.2
  • AABR07065813.1
  • C1qa
  • C1qb
  • C1qc
  • C1qg
  • C1r
  • C1s
  • C2
  • C4
  • C4a
  • C4b
  • Cfb
  • Colec10
  • Crarf
  • ENSRNOG00000062324
  • ENSRNOG00000062682
  • ENSRNOG00000062762
  • ENSRNOG00000062853
  • ENSRNOG00000062915
  • ENSRNOG00000062976
  • ENSRNOG00000063148
  • ENSRNOG00000063329
  • ENSRNOG00000063340
  • ENSRNOG00000063341
  • ENSRNOG00000063422
  • ENSRNOG00000063550
  • ENSRNOG00000063572
  • ENSRNOG00000063707
  • ENSRNOG00000063791
  • ENSRNOG00000064041
  • ENSRNOG00000064061
  • ENSRNOG00000064085
  • ENSRNOG00000064245
  • ENSRNOG00000064481
  • ENSRNOG00000064582
  • ENSRNOG00000065160
  • ENSRNOG00000065181
  • ENSRNOG00000065191
  • ENSRNOG00000065237
  • ENSRNOG00000065406
  • ENSRNOG00000065564
  • ENSRNOG00000065629
  • ENSRNOG00000065670
  • ENSRNOG00000065675
  • ENSRNOG00000065690
  • ENSRNOG00000065855
  • ENSRNOG00000066010
  • ENSRNOG00000066072
  • ENSRNOG00000066203
  • ENSRNOG00000066380
  • ENSRNOG00000066406
  • ENSRNOG00000066431
  • ENSRNOG00000066785
  • ENSRNOG00000066812
  • ENSRNOG00000066814
  • ENSRNOG00000066904
  • ENSRNOG00000066922
  • ENSRNOG00000066926
  • ENSRNOG00000066971
  • ENSRNOG00000067010
  • ENSRNOG00000067025
  • ENSRNOG00000067233
  • ENSRNOG00000067273
  • ENSRNOG00000067516
  • ENSRNOG00000067603
  • ENSRNOG00000067643
  • ENSRNOG00000067679
  • ENSRNOG00000067883
  • ENSRNOG00000068055
  • ENSRNOG00000068059
  • ENSRNOG00000068381
  • ENSRNOG00000068499
  • ENSRNOG00000068847
  • ENSRNOG00000069193
  • ENSRNOG00000069427
  • ENSRNOG00000069491
  • ENSRNOG00000069766
  • ENSRNOG00000069828
  • ENSRNOG00000069901
  • ENSRNOG00000069940
  • ENSRNOG00000070091
  • ENSRNOG00000070192
  • ENSRNOG00000070244
  • ENSRNOG00000070247
  • ENSRNOG00000070810
  • ENSRNOG00000070812
  • ENSRNOG00000070816
  • ENSRNOG00000070832
  • ENSRNOG00000070933
  • ENSRNOG00000071049
  • ENSRNOG00000071091
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Igkv2-112l1
  • Igkv8-30l1
  • Igkvl-ps6
  • Igkvl10
  • Igkvl12
  • Igkvl13
  • Igkvl2
  • Iglc1
  • Igll1
  • LOC100363522
  • LOC100365500
  • LOC100911032
  • LOC102551948
  • LOC690813
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
  • RGD1561722
  • RGD1564696
  • r-gsp
Rattus norvegicus (Norway rat)
Lectin pathway of complement activation
  • Colec10
  • Crarf
  • Fcn1
  • Fcn2
  • Fcna
  • Fcnb
  • Masp1
  • Masp2
  • Masp3
  • Mbl2
Rattus norvegicus (Norway rat)

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International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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