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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
G65562ZE
Summary
- GlyTouCan ID
-
G65562ZE
- IUPAC Condensed
- Neu5Ac(a2-3)Gal(b1-3)GalNAc(a1-
- Motifs
- Sialyl T antigen
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 674.24
3D Structures
Organisms
| Organisms | Evidence |
|---|---|
| Rattus norvegicus (Norway rat) | |
| Cricetulus griseus (Chinese hamster) | |
| Bos taurus (domestic cattle) | |
| Canis lupus familiaris (dog) |
Taxonomic Hierarchy
root
cellular organisms [inference]
Eukaryota (eucaryotes) [inference]
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST3GAL2 | CMP-Neu5Ac |
G00031MO
|
R |
G65562ZE
|
R | |
| ST6GALNAC2 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST6GALNAC1 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| ST3GAL4 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free | |
| ST3GAL1 | CMP-Neu5Ac |
G00031MO
|
Antifreeze glycoprotein |
G65562ZE
|
Antifreeze glycoprotein | |
| ST6GALNAC3 | CMP-Neu5Ac |
G65562ZE
|
Ser/Thr |
G01614ZM
|
Ser/Thr | |
| ST3GAL3 | CMP-Neu5Ac |
G00031MO
|
free |
G65562ZE
|
free | |
| ST6GALNAC4 | CMP-Neu5Ac |
G65562ZE
|
R |
G01614ZM
|
R |
KEGG BRITE Database
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P06028 | Glycophorin-B | ||
| P06867 | Plasminogen | ||
| P06868 | Plasminogen | ||
| P07359 | Platelet glycoprotein Ib alpha chain | ||
| P08519 | Apolipoprotein(a) | ||
| P08575 | Receptor-type tyrosine-protein phosphatase C | ||
| P08751 | Lutropin/choriogonadotropin subunit beta | ||
| P0DN86 | Choriogonadotropin subunit beta 3 | ||
| P10645 | Chromogranin-A | ||
| P12763 | Alpha-2-HS-glycoprotein |
GlycomeAtlas
Tissues in which this glycan is expressed are highlighted in yellow.
- Danio rerio
Literature
- Tissue
-
- heart
- intestine
- liver
- Reference
- Yamakawa N et al. Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns. Nat Commun. 2018;9(1):4647. Published 2018 Nov 7. doi:10.1038/s41467-018-06950-3
- DOI
- 10.1038/s41467-018-06950-3
Localization sites organized by hierarchy by Uber-anatomy ontology (UBERON)
Sequence Descriptors
- GlycoCT
-
RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n
- WURCS
- WURCS=2.0/3,3,2/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a3-b1_b3-c2
