GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **451 - 475** of **1070** in total

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Pathway Name	Protein Name	UniProt ID	Gene Symbol ▲	Organism
RND3 GTPase cycle	Ankyrin repeat domain containing 26 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 Carboxypeptidase D Caveolin-1 Coiled coil domain containing 88A Creatine kinase B-type Cytoskeleton-associated protein 4 DEP domain containing 1B Desmoglein 1 Desmoplakin Discs large MAGUK scaffold protein 5 Dystonin Family with sequence similarity 83, member B Flotillin-2 Kinectin 1 Mucin-13 Nischarin Phosphatidylinositol 3-kinase regulatory subunit alpha Phosphatidylinositol 3-kinase regulatory subunit beta Phosphatidylinositol-binding clathrin assembly protein Plakophilin 4 Pleckstrin homology domain-containing family G member 5 RAS protein activator like 2 RNA binding motif protein 39 RNA-binding motif protein, X chromosome Rho GTPase activating protein 21 Rho GTPase activating protein 5 Rho GTPase-activating protein 35 Rho-associated protein kinase 1 Rho-related GTP-binding protein RhoE Scribble planar cell polarity protein Semaphorin-4F Thioredoxin-like protein 1 Tropomodulin 3 Tyrosine-protein phosphatase non-receptor type 13 UBX domain-containing protein 11 Vang-like protein 2 Vang-like protein receptor protein-tyrosine kinase tRNA (34-2'-O)-methyltransferase regulator WDR6	A0A0G2K7N9 A0A8I5ZQD4 A0A8I6A4W2 A0A8I6A5W7 A0A8I6A880 A0A8I6AI87 A0A8I6GDA1 A0A8I6GLX4 A0A8J8XIU8 D3ZBN3 D3ZF70 D3ZH41 D3ZKC8 D3ZM39 D3ZWS0 D4AA32 F1LMV6 F7F0R0 G3V9S3 M0R3T8 O55012 P07335 P41350 P81128 P84889 P97881 Q4G017 Q4V898 Q5XFW6 Q63644 Q63787 Q63788 Q6RFZ7 Q6SA80 Q7TNY1 Q8R512 Q920J4 Q9JHW1 Q9Z143 Q9Z2S9	Ankrd26 Arhe Arhgap21 Arhgap35 Arhgap5 Calm Cav Cav1 Ccdc88a Ckap4 Ckb Ckbb Cpd Depdc1b Dlg5 Dsg1 Dsp Dst Epha2 Fam83b Flot2 Grlf1 Ktn1 Muc13 Nisch P190A Picalm Pik3r1 Pik3r2 Pkp4 Plekhg5 Ptpn13 Rasal2 Rbm39 Rbmx Rbmxrt Reg1 Rhoe Rnd3 Rock1 Scrib Sema4f Soc Tech Tmod3 Tnfaip1 Trp Txnl1 Ubxd5 Ubxn11 Vangl1 Vangl2 Wdr6 p190ARHOGAP	Rattus norvegicus (Norway rat)
TRP channels	Mucolipin 2 Mucolipin TRP cation channel 1 Mucolipin TRP cation channel 3 Short transient receptor potential channel 1 Short transient receptor potential channel 3 Short transient receptor potential channel 4 Transient receptor potential cation channel subfamily A member 1 Transient receptor potential cation channel subfamily C member 5 Transient receptor potential cation channel subfamily M member 1 Transient receptor potential cation channel subfamily M member 2 Transient receptor potential cation channel subfamily M member 4 Transient receptor potential cation channel subfamily M member 7 Transient receptor potential cation channel subfamily M member 8 Transient receptor potential cation channel subfamily V member 1 Transient receptor potential cation channel subfamily V member 2 Transient receptor potential cation channel subfamily V member 4 Transient receptor potential cation channel subfamily V member 5 Transient receptor potential cation channel subfamily V member 6 Transient receptor potential cation channel, subfamily C, member 7 Transient receptor potential cation channel, subfamily M, member 3 Transient receptor potential cation channel, subfamily M, member 5 Transient receptor potential cation channel, subfamily V, member 3 non-specific serine/threonine protein kinase	A0A8I5ZXW7 A0A8I6ALW5 D3ZRF9 E9PTA2 E9PU00 F1LMD7 F1LQF7 F1M7G0 O35119 O35433 Q2WEA5 Q499S1 Q6RI86 Q8R455 Q8VD38 Q925B3 Q9ERZ8 Q9ESQ5 Q9JIP0 Q9JMI9 Q9QX01 Q9R186 Q9WUD2	Anktm1 Cat2 Cmr1 Ecac Ecac1 Ltrpc4 Mcoln1 Mcoln2 Mcoln3 Sac2b Trp1 Trpa1 Trpc1 Trpc3 Trpc4 Trpc5 Trpc7 Trpm1 Trpm2 Trpm3 Trpm4 Trpm5 Trpm6 Trpm7 Trpm8 Trpv1 Trpv2 Trpv3 Trpv4 Trpv5 Trpv6 Trrp3 Vr1 Vr1l Vrl1 Vroac	Rattus norvegicus (Norway rat)
HuR (ELAVL1) binds and stabilizes mRNA	Acidic leucine-rich nuclear phosphoprotein 32 family member A ELAV-like protein 1 Exportin-1 Nucleoporin 214 Protein SET Protein kinase C alpha type Protein kinase C delta type TNF superfamily member 13	A0A8J8XC20 B5DF91 D4ACK1 P05696 P09215 P49911 Q63945 Q80U96	Anp32a Crm1 Elavl1 Hur Lanp Nup214 Pkca Pkcd Prkca Prkcd Set Tnfsf13 Xpo1	Rattus norvegicus (Norway rat)
Dissolution of Fibrin Clot	Annexin A2 Glia-derived nexin Histidine-rich glycoprotein Plasminogen activator inhibitor 1 Plasminogen activator inhibitor 2 type A Plasminogen Protein S100-A10 Serpin B6 Serpin family B member 8 Serpin family F member 2 Tissue-type plasminogen activator Urokinase plasminogen activator surface receptor Urokinase-type plasminogen activator	A0A8I6A6H8 A0A8I6AQI7 D3ZHB5 P05943 P07092 P19637 P20961 P29524 P29598 P49616 Q01177 Q07936 Q99PS8	Anx2 Anxa2 Hrg Hrg1 Pai1 Pai2 Pi7 Planh1 Planh2 Plat Plau Plaur Plg Pn1 S100a10 Serpinb2 Serpinb6a Serpinb8 Serpine1 Serpine2 Serpinf2	Rattus norvegicus (Norway rat)
Gap junction degradation	AP-2 complex subunit mu Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Disabled homolog 2 Dynamin-1 Dynamin-2 Gap junction alpha-1 protein Unconventional myosin-VI	A0A8I6ACM8 O88797 P08050 P08081 P08082 P11442 P21575 P39052 P84092	Ap2m1 Clta Cltb Cltc Cxn-43 Dab2 Dnm Dnm1 Dnm2 Doc2 Dyn2 Gja1 Myo6	Rattus norvegicus (Norway rat)
Formation of annular gap junctions	AP-2 complex subunit mu Clathrin heavy chain 1 Clathrin light chain A Clathrin light chain B Disabled homolog 2 Dynamin-1 Dynamin-2 Gap junction alpha-1 protein	O88797 P08050 P08081 P08082 P11442 P21575 P39052 P84092	Ap2m1 Clta Cltb Cltc Cxn-43 Dab2 Dnm Dnm1 Dnm2 Doc2 Dyn2 Gja1	Rattus norvegicus (Norway rat)
Dopamine Neurotransmitter Release Cycle	Amyloid-beta A4 precursor protein-binding family A member 1 Complexin-1 Liprin-alpha-3 Liprin-alpha-4 (Fragment) PTPRF interacting protein alpha 1 PTPRF interacting protein alpha 2 Peripheral plasma membrane protein CASK Peripheral-type benzodiazepine receptor-associated protein 1 Protein lin-7 homolog A Protein lin-7 homolog B Protein lin-7 homolog C Protein unc-13 homolog B Ras-related protein Rab-3A Regulating synaptic membrane exocytosis protein 1 Synapsin-1 Synapsin-2 Synapsin-3 Synaptic vesicular amine transporter Synaptosomal-associated protein 25 Synaptotagmin-1 Syntaxin-1A Syntaxin-binding protein 1 Vesicle-associated membrane protein 2	A0A1B0GWS0 A0A8I6AK94 O35430 O70441 P09951 P21707 P32851 P60881 P61765 P63012 P63041 P63045 Q01827 Q62769 Q62915 Q63537 Q792I0 Q91Z79 Q91Z80 Q9JIR0 Q9JIR4 Q9Z250 Q9Z252	Apba1 Bzrap1 Cask Cplx1 Lin7a Lin7b Lin7c Mals1 Mals2 Mals3 Mint1 Ppfia1 Ppfia2 Ppfia3 Ppfia4 Rab3a Rbp1 Rim1 Rims1 Sap Slc18a2 Snap Snap25 Stx1a Stxbp1 Svat Syb2 Syn1 Syn2 Syn3 Syt1 Tspoap1 Unc13b Unc13h2 Unc18a Vamp2 Veli1 Veli1a Veli2 Veli3 Vmat2 X11	Rattus norvegicus (Norway rat)
GRB2:SOS provides linkage to MAPK signaling for Integrins	Amyloid beta A4 precursor protein-binding family B member 1-interacting protein Fibrinogen alpha chain Fibrinogen beta chain Fibrinogen gamma chain Fibronectin Focal adhesion kinase 1 Growth factor receptor-bound protein 2 Integrin beta-3 Integrin subunit alpha 2b Proto-oncogene tyrosine-protein kinase Src Ras-related protein Rap-1A Ras-related protein Rap-1b SOS Ras/Rac guanine nucleotide exchange factor 1 Talin 1	A0A8I6ABG6 A0A8I6GGN2 D3ZDZ1 D4A3T0 O35346 P02680 P04937 P06399 P14480 P62836 P62994 Q62636 Q8R2H2 Q9WUD9	Apbb1ip Ash Fak Fak1 Fga Fgb Fgg Fn1 Grb2 Itga2b Itgb3 Krev1 Ptk2 Rap1a Rap1b Sos1 Src Tln1	Rattus norvegicus (Norway rat)
p130Cas linkage to MAPK signaling for integrins	Adapter molecule crk Amyloid beta A4 precursor protein-binding family B member 1-interacting protein Breast cancer anti-estrogen resistance protein 1 Fibrinogen alpha chain Fibrinogen beta chain Fibrinogen gamma chain Fibronectin Focal adhesion kinase 1 Integrin beta-3 Integrin subunit alpha 2b Proto-oncogene tyrosine-protein kinase Src Ras-related protein Rap-1A Ras-related protein Rap-1b Talin 1	A0A8I6ABG6 A0A8I6GGN2 D3ZDZ1 O35346 P02680 P04937 P06399 P14480 P62836 Q62636 Q63767 Q63768 Q8R2H2 Q9WUD9	Apbb1ip Bcar1 Cas Crk Crkas Crko Fak Fak1 Fga Fgb Fgg Fn1 Itga2b Itgb3 Krev1 Ptk2 Rap1a Rap1b Src Tln1	Rattus norvegicus (Norway rat)
Ovarian tumor domain proteases	Adenomatous polyposis coli protein Cellular tumor antigen p53 Cyclin-dependent kinase 1 Deubiquitinating protein VCPIP1 Estrogen receptor NF-kappa-B essential modulator NF-kappa-B essential modulator Nucleotide-binding oligomerization domain containing 1 Nucleotide-binding oligomerization domain containing 2 Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN Polyubiquitin-B Polyubiquitin-C Receptor interacting serine/threonine kinase 1 Receptor-interacting serine/threonine-protein kinase 2 Ring finger protein 128 TNF receptor-associated factor 6 TNF receptor-associated factor TNFAIP3 interacting protein 1 TNFAIP3 interacting protein 2 Transforming protein RhoA Transitional endoplasmic reticulum ATPase Ubiquitin B-like Ubiquitin thioesterase OTU1 Ubiquitin thioesterase OTUB1 Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-ribosomal protein eS31 fusion protein ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1	A0A0G2K4Z7 A0A0G2K5N0 A0A0G2K7X2 A0A8I6A5Y3 A0A8I6AH74 A0A8I6AL23 A0A8I6AU71 B2RYG6 B2RZ84 B5DF45 D3ZAR8 D3ZDK2 D3ZHV1 D3ZYL0 D4A3I0 D4A7M3 D4ABZ4 D4ADT7 G3V783 G3V7R6 P06211 P0CG51 P10361 P39951 P46462 P61589 P62982 P70478 Q32Q05 Q63429 Q6TMG5 Q8CF97	Apc Arha Arha2 Cdc2 Cdc2a Cdk1 Cdkn1 Esr Esr1 Estr Hshin7 Ikbkg LOC100360606 LOC100360645 Nemo Nod1 Nod2 Nr3a1 Otub1 Otub2 Otud3 Otud7a Otud7b P53 Pten Rhoa Ripk1 Ripk2 Rnf128 Rps27a Tnfaip3 Tnip1 Tnip2 Tp53 Traf3 Traf6 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Ube2d1 Vcip135 Vcp Vcpip1 Yod1 Zranb1	Rattus norvegicus (Norway rat)
Receptor Mediated Mitophagy	Autophagy protein 5 Casein kinase II subunit alpha Casein kinase II subunit alpha Casein kinase II subunit beta FUN14 domain-containing protein 1 Microtubule-associated proteins 1A/1B light chain 3A Microtubule-associated proteins 1A/1B light chain 3B Proto-oncogene tyrosine-protein kinase Src Serine/threonine-protein kinase Serine/threonine-protein phosphatase PGAM5, mitochondrial Ubiquitin-like protein ATG12	D3ZMG0 F7FH41 P19139 P67874 Q2TBJ5 Q3MQ06 Q562B5 Q5BJS4 Q62625 Q6XVN8 Q9WUD9	Apg12l Atg12 Atg5 Ck2n Csnk2a1 Csnk2a2 Csnk2b Fundc1 Map1alc3 Map1lc3 Map1lc3a Map1lc3b Pgam5 Src Ulk1	Rattus norvegicus (Norway rat)
PINK1-PRKN Mediated Mitophagy	Autophagy protein 5 E3 ubiquitin-protein ligase parkin Microtubule-associated proteins 1A/1B light chain 3A Microtubule-associated proteins 1A/1B light chain 3B Mitochondrial import receptor subunit TOM20 homolog Mitochondrial import receptor subunit TOM22 homolog Mitochondrial import receptor subunit TOM40 homolog Mitochondrial import receptor subunit TOM7 homolog Mitochondrial import receptor subunit TOM70 Mitofusin-1 Mitofusin-2 Polyubiquitin-B Polyubiquitin-C Sequestosome-1 Serine/threonine-protein kinase PINK1, mitochondrial Transcription termination factor 3, mitochondrial Translocase of outer mitochondrial membrane 5 Ubiquitin B-like Ubiquitin-like protein ATG12 Ubiquitin-ribosomal protein eS31 fusion protein Voltage-dependent anion-selective channel protein 1	A0A1B0GWY3 A0A8I6A5Y3 B5DFG1 D3ZMR1 O08623 P0CG51 P62982 Q2TBJ5 Q3MQ06 Q62625 Q62760 Q63429 Q6P6Q6 Q6XVN8 Q75Q39 Q75Q40 Q75Q41 Q8R4Z9 Q8R500 Q9JK66 Q9Z2L0	Apg12l Atg12 Atg5 Fzo1a Fzo1b LOC100360645 Map1alc3 Map1lc3 Map1lc3a Map1lc3b Mfn1 Mfn2 Mterf3 Mterfd1 Park2 Pink1 Prkn Rps27a Sqstm1 Tom22 Tom40 Tom40a Tomm20 Tomm22 Tomm40 Tomm5 Tomm7 Tomm70 Tomm70a Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Vdac1 Zip	Rattus norvegicus (Norway rat)
NRIF signals cell death from the nucleus	Beta-nerve growth factor Centromere protein R Gamma-secretase subunit APH-1 Gamma-secretase subunit PEN-2 Nicastrin Polyubiquitin-B Polyubiquitin-C Presenilin-1 Presenilin-2 Sequestosome-1 TNF receptor-associated factor 6 Tumor necrosis factor receptor superfamily member 16 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A8I6A5Y3 B5DF45 F7EYZ3 O08623 O88777 P07174 P0CG51 P25427 P62982 P97887 Q5U1Z7 Q63429 Q6QI68 Q8CGU6	Aph1a Cenpr Itgb3bp LOC100360645 Ncstn Ngf Ngfb Ngfr Nrif3 Ps2 Psen1 Psen2 Psenen Psnl1 Psnl2 Rps27a Sqstm1 Tnfrsf16 Traf6 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Zip	Rattus norvegicus (Norway rat)
EPH-ephrin mediated repulsion of cells	72 kDa type IV collagenase Ephrin B3 Ephrin type-B receptor 1 Ephrin type-B receptor 3 Ephrin type-B receptor 6 Ephrin-B1 Gamma-secretase subunit APH-1 Gamma-secretase subunit PEN-2 Matrix metalloproteinase-9 Nicastrin Presenilin-1 Presenilin-2 Proto-oncogene tyrosine-protein kinase Src Ras-related C3 botulinum toxin substrate 1 TIAM Rac1 associated GEF 1 Tyrosine-protein kinase Fyn Tyrosine-protein kinase Lyn Tyrosine-protein kinase Yes Vav guanine nucleotide exchange factor 2 Vav guanine nucleotide exchange factor 3 receptor protein-tyrosine kinase receptor protein-tyrosine kinase	A0A8I5ZPB5 A0A8I6AC12 D3ZH39 D3ZYG0 F1LM93 F1MAJ0 F7EYZ3 G3V7D4 M0RDA4 O88777 P09759 P0C0K7 P33436 P50282 P52796 P97887 Q07014 Q62844 Q6QI68 Q6RUV5 Q8CGU6 Q9WUD9	Aph1a Efnb1 Efnb3 Elk Ephb1 Ephb2 Ephb3 Ephb4 Ephb6 Eplg2 Epth2 Fyn LOC686310 Lerk2 Lyn Mmp2 Mmp9 Ncstn Ps2 Psen1 Psen2 Psenen Psnl1 Psnl2 Rac Rac1 Src Tiam1 Vav2 Vav3 Yes1	Rattus norvegicus (Norway rat)
Noncanonical activation of NOTCH3	Gamma-secretase subunit APH-1 Gamma-secretase subunit PEN-2 Neurogenic locus notch homolog protein 3 Nicastrin Presenilin-1 Presenilin-2 Y-box-binding protein 1	F7EYZ3 O88777 P62961 P97887 Q6QI68 Q8CGU6 Q9R172	Aph1a Ncstn Notch3 Ps2 Psen1 Psen2 Psenen Psnl1 Psnl2 Yb1 Ybx1	Rattus norvegicus (Norway rat)
Regulation of TNFR1 signaling	Baculoviral IAP repeat-containing 2 Baculoviral IAP repeat-containing 3 CASP8 and FADD-like apoptosis regulator Caspase-8 E2 ubiquitin-conjugating enzyme E3 ubiquitin-protein ligase MIB2 E3 ubiquitin-protein ligase XIAP FAS-associated death domain protein Inhibitor of nuclear factor kappa B kinase subunit epsilon Inhibitor of nuclear factor kappa-B kinase subunit alpha Inhibitor of nuclear factor kappa-B kinase subunit beta MAP kinase-activating death domain protein MAPK activated protein kinase 2 NF-kappa-B essential modulator NF-kappa-B essential modulator Optineurin Polyubiquitin-B Polyubiquitin-C RBR-type E3 ubiquitin transferase RanBP-type and C3HC4-type zinc finger-containing protein 1 Receptor interacting serine/threonine kinase 1 Serine/threonine-protein kinase Signal peptide peptidase-like 2A Signal peptide peptidase-like 2B Small ribosomal subunit protein RACK1 Spermatogenesis-associated protein 2 TANK-binding kinase 1 TNF receptor-associated factor TNF receptor-associated factor Tax1-binding protein 1 homolog Tumor necrosis factor receptor superfamily member 1A Tumor necrosis factor receptor type 1-associated DEATH domain protein Tumor necrosis factor Ubiquitin B-like Ubiquitin carboxyl-terminal hydrolase 21 Ubiquitin carboxyl-terminal hydrolase 2 Ubiquitin carboxyl-terminal hydrolase 4 Ubiquitin carboxyl-terminal hydrolase CYLD Ubiquitin-conjugating enzyme E2 D1 Ubiquitin-conjugating enzyme E2 D2 Ubiquitin-conjugating enzyme E2 D3 Ubiquitin-ribosomal protein eS31 fusion protein ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1	A0A0G2JTI9 A0A0G2JYA3 A0A0G2K5N0 A0A1B0GWY7 A0A8I6A5Y3 A0A8I6AH74 A0A8I6AL23 A0A8I6ANR6 B2GUX4 B2GUZ1 B5DFH7 C0H5Y5 D3Z8W5 D3ZDK2 D3ZMG0 D3ZNC0 D3ZYL0 D3ZZC5 D4A5E7 D4A7D3 E9PU29 O08873 P0CG51 P16599 P22934 P61078 P62839 P62982 P63245 Q5PQL3 Q5U349 Q62921 Q63429 Q66H62 Q66HA4 Q66HP6 Q68LP1 Q6P6S1 Q6TMG5 Q80ZF4 Q8R2E7 Q8R5M4 Q9JHX4 Q9QY78 Q9R0I6	Api3 Birc2 Birc3 Birc4 Casp8 Cflar Chuk Cyld Cyld1 Fadd Gnb2l1 Ikbkb Ikbke Ikbkg Ikkb LOC100360645 Madd Mapkapk2 Mib2 NEWGENE_1308361 Nemo Optn Otud1 Otud7b Pd1 Pkcbpb15 Rack1 Rbck Rbck1 Ripk1 Rnf31 Rps27a Spata2 Sppl2a Sppl2b Tax1bp1 Tbk1 Tnf Tnfa Tnfaip3 Tnfr-1 Tnfr1 Tnfrsf1a Tnfsf2 Tradd Traf1 Traf2 Uba80 Ubb Ubbl1 Ubc Ubc4 Ubce7ip3 Ubcep1 Ubch4 Ubch5b Ubcl1 Ube2d1 Ube2d2 Ube2d3 Ube2l3 Ubp41 Ubp69 Ulk1 Usp2 Usp21 Usp4 Xiap	Rattus norvegicus (Norway rat)
TNFR1-induced NF-kappa-B signaling pathway	Baculoviral IAP repeat-containing 2 Baculoviral IAP repeat-containing 3 E3 ubiquitin-protein ligase XIAP Inhibitor of nuclear factor kappa-B kinase subunit alpha Inhibitor of nuclear factor kappa-B kinase subunit beta Mitogen-activated protein kinase kinase kinase 7 NF-kappa-B essential modulator NF-kappa-B essential modulator Optineurin RBR-type E3 ubiquitin transferase RanBP-type and C3HC4-type zinc finger-containing protein 1 Receptor interacting serine/threonine kinase 1 Small ribosomal subunit protein RACK1 Spermatogenesis-associated protein 2 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 TGF-beta activated kinase 1/MAP3K7 binding protein 1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 TNF receptor-associated factor TNF receptor-associated factor Tumor necrosis factor receptor superfamily member 1A Tumor necrosis factor receptor type 1-associated DEATH domain protein Tumor necrosis factor Ubiquitin carboxyl-terminal hydrolase 21 Ubiquitin carboxyl-terminal hydrolase 2 Ubiquitin carboxyl-terminal hydrolase 4 Ubiquitin carboxyl-terminal hydrolase CYLD ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1	A0A0G2JTI9 A0A0G2K5N0 A0A0U1RRU5 A0A1B0GWY7 A0A8I6ABN5 A0A8I6AH74 A0A8I6AL23 A0A8I6ANR6 B2GUX4 B2GUZ1 B5DFH7 D3ZNC0 D3ZYL0 D3ZZC5 E9PU29 P0C8E4 P16599 P22934 P63245 Q5U303 Q5U349 Q62921 Q66H62 Q66HP6 Q6P6S1 Q6TMG5 Q8R5M4 Q9QY78 Q9R0I6	Api3 Birc2 Birc3 Birc4 Chuk Cyld Cyld1 Gnb2l1 Ikbkb Ikbkg Ikkb Map3k7 Map3k7ip2 Nemo Optn Otud1 Otud7b Pd1 Pkcbpb15 Rack1 Rbck Rbck1 Ripk1 Rnf31 Spata2 Tab1 Tab2 Tab3 Tnf Tnfa Tnfaip3 Tnfr-1 Tnfr1 Tnfrsf1a Tnfsf2 Tradd Traf1 Traf2 Ubce7ip3 Ubp41 Ubp69 Usp2 Usp21 Usp4 Xiap	Rattus norvegicus (Norway rat)
TNFR1-induced proapoptotic signaling	Baculoviral IAP repeat-containing 2 Baculoviral IAP repeat-containing 3 E3 ubiquitin-protein ligase MIB2 E3 ubiquitin-protein ligase XIAP FAS-associated death domain protein Inhibitor of nuclear factor kappa B kinase subunit epsilon RBR-type E3 ubiquitin transferase RanBP-type and C3HC4-type zinc finger-containing protein 1 Receptor interacting serine/threonine kinase 1 Spermatogenesis-associated protein 2 TANK-binding kinase 1 TNF receptor-associated factor Tumor necrosis factor receptor superfamily member 1A Tumor necrosis factor receptor type 1-associated DEATH domain protein Tumor necrosis factor Ubiquitin carboxyl-terminal hydrolase 21 Ubiquitin carboxyl-terminal hydrolase 2 Ubiquitin carboxyl-terminal hydrolase 4 Ubiquitin carboxyl-terminal hydrolase CYLD ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1 ubiquitinyl hydrolase 1	A0A0G2JTI9 A0A0G2K5N0 A0A8I6AL23 B2GUX4 B2GUZ1 B5DFH7 D3ZNC0 D3ZYL0 D3ZZC5 D4A5E7 D4A7D3 E9PU29 P16599 P22934 Q5U349 Q62921 Q66H62 Q66HP6 Q68LP1 Q6P6S1 Q8R2E7 Q9R0I6	Api3 Birc2 Birc3 Birc4 Cyld Cyld1 Fadd Ikbke Mib2 Otud1 Otud7b Pd1 Pkcbpb15 Rbck Rbck1 Ripk1 Rnf31 Spata2 Tbk1 Tnf Tnfa Tnfaip3 Tnfr-1 Tnfr1 Tnfrsf1a Tnfsf2 Tradd Traf2 Ubce7ip3 Ubp41 Ubp69 Usp2 Usp21 Usp4 Xiap	Rattus norvegicus (Norway rat)
Chylomicron remodeling	Apolipoprotein A-I Apolipoprotein A-II Apolipoprotein A-IV Apolipoprotein A-V Apolipoprotein B-100 Apolipoprotein C-II Apolipoprotein C-III Apolipoprotein E Glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 Lipoprotein lipase	D3ZZL5 G3V8D4 P02650 P02651 P04638 P04639 P06759 Q06000 Q7TMA5 Q9QUH3	Apoa1 Apoa2 Apoa4 Apoa5 Apob Apoc2 Apoc3 Apoe Gpihbp1 Lpl Rap3	Rattus norvegicus (Norway rat)
Chylomicron assembly	Apolipoprotein A-I Apolipoprotein A-II Apolipoprotein A-IV Apolipoprotein B-100 Apolipoprotein C-II Apolipoprotein C-III Apolipoprotein E Microsomal triglyceride transfer protein large subunit Protein disulfide-isomerase Small COPII coat GTPase SAR1B	D4A1W8 G3V8D4 P02650 P02651 P04638 P04639 P04785 P06759 Q5HZY2 Q7TMA5	Apoa1 Apoa2 Apoa4 Apob Apoc2 Apoc3 Apoe Mtp Mttp P4hb Pdia1 Sar1b	Rattus norvegicus (Norway rat)
Scavenging by Class A Receptors	Apolipoprotein A-I Apolipoprotein B-100 Apolipoprotein E Calreticulin Endoplasmin Macrophage receptor with collagenous structure Macrophage scavenger receptor 1 Secretoglobin, family 3A, member 2	D3ZDS2 F7FAW3 M0R9F7 P02650 P04639 P18418 Q66HD0 Q7TMA5	Apoa1 Apob Apoe Calr Grp94 Hsp90b1 Hspc4 Marco Msr1 Scgb3a2 Tra1	Rattus norvegicus (Norway rat)
Heme signaling	Apolipoprotein A-I Apolipoprotein B-100 BTB domain and CNC homolog 1 C-type lectin domain family 1 member B Exportin-1 Hemoglobin subunit alpha-1/2 Hemoglobin subunit beta-1 Lymphocyte antigen 96 Membrane-associated progesterone receptor component 2 Proton-coupled folate transporter Toll-like receptor 4	D3ZJD8 D4ACD2 P01946 P02091 P04639 Q56DL5 Q5EBA8 Q5XIU9 Q7TMA5 Q80U96 Q9QX05	Apoa1 Apob Bach1 Clec1b Crm1 Hba-a1 Hba1 Hbb Hcp1 LOC100911490 Ly96 Pcft Pgrmc2 Slc46a1 Tlr4 Xpo1	Rattus norvegicus (Norway rat)
Scavenging by Class B Receptors	Apolipoprotein A-I Apolipoprotein B-100 Platelet glycoprotein 4 Scavenger receptor class B member 1	P04639 P97943 Q07969 Q7TMA5	Apoa1 Apob Cd36 Fat Scarb1	Rattus norvegicus (Norway rat)
VLDL clearance	Apolipoprotein B receptor Apolipoprotein B-100 Apolipoprotein C-I Apolipoprotein C-IV Very low-density lipoprotein receptor	A0A0G2K7M4 P19939 P55797 P98166 Q7TMA5	Apob Apobr Apoc1 Apoc4 Ecl Vldlr	Rattus norvegicus (Norway rat)
VLDL assembly	Apolipoprotein B-100 Apolipoprotein C-I Apolipoprotein C-IV Microsomal triglyceride transfer protein large subunit Protein disulfide-isomerase	D4A1W8 P04785 P19939 P55797 Q7TMA5	Apob Apoc1 Apoc4 Ecl Mtp Mttp P4hb Pdia1	Rattus norvegicus (Norway rat)

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