GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **501 - 525** of **1070** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
NPAS4 regulates expression of target genes	Aryl hydrocarbon receptor nuclear translocator 2 Aryl hydrocarbon receptor nuclear translocator Basic helix-loop-helix ARNT-like protein 1 Melanoma-associated antigen D1 Neuronal PAS domain-containing protein 4	P41739 Q78E60 Q8CJH6 Q9EPW1 Q9ES73	Arnt Arnt2 Arntl Bmal1 Maged1 Npas4 Nrage Nxf Tic	Rattus norvegicus (Norway rat)
NOTCH4 Activation and Transmission of Signal to the Nucleus	14-3-3 protein zeta/delta	P63102	Msfs1 Ywhaz	Rattus norvegicus (Norway rat)
NOTCH3 Activation and Transmission of Signal to the Nucleus	Delta-like protein 1 Delta-like protein 4 Disintegrin and metalloproteinase domain-containing protein 10 E3 ubiquitin-protein ligase Gamma-secretase subunit APH-1 Gamma-secretase subunit PEN-2 Neurogenic locus notch homolog protein 3 Nicastrin Polyubiquitin-B Polyubiquitin-C Presenilin-1 Presenilin-2 Pro-epidermal growth factor Protein jagged-1 Protein jagged-2 (Fragment) Receptor protein-tyrosine kinase Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein	A0A8I6A5Y3 B4F767 D3ZHH1 F7EYZ3 G3V6K6 O88777 P07522 P0CG51 P62982 P97607 P97677 P97887 Q10743 Q63429 Q63722 Q6QI68 Q8CGU6 Q9R172	Adam10 Aph1a Dll1 Dll4 Egf Egfr Jag1 Jag2 LOC100360645 Madm Ncstn Notch3 Ps2 Psen1 Psen2 Psenen Psnl1 Psnl2 Rps27a Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Wwp2	Rattus norvegicus (Norway rat)
NOSTRIN mediated eNOS trafficking	Caveolin-1 Dynamin-2 Nitric oxide synthase 3 Nostrin	P39052 P41350 Q5I0D6 Q62600	Cav Cav1 Dnm2 Dyn2 Nos3 Nostrin	Rattus norvegicus (Norway rat)
NOSIP mediated eNOS trafficking	Nitric oxide synthase 3 Nitric oxide synthase-interacting protein	A0A8I5ZL30 Q62600	Nos3 Nosip	Rattus norvegicus (Norway rat)
NOD1/2 Signaling Pathway	Angio-associated, migratory cell protein Baculoviral IAP repeat-containing 2 Baculoviral IAP repeat-containing 3 Caspase-1 Caspase-2 Caspase-8 Caspase-9 E3 ubiquitin-protein ligase Mapk11 protein Mitogen-activated protein kinase 12 Mitogen-activated protein kinase 13 Mitogen-activated protein kinase 14 Mitogen-activated protein kinase kinase kinase 7 NF-kappa-B essential modulator NF-kappa-B essential modulator Nucleotide-binding oligomerization domain containing 1 Nucleotide-binding oligomerization domain containing 2 Receptor-interacting serine/threonine-protein kinase 2 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 TGF-beta activated kinase 1/MAP3K7 binding protein 1 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 Ubiquitin carboxyl-terminal hydrolase CYLD mitogen-activated protein kinase kinase ubiquitinyl hydrolase 1	A0A0G2JTI9 A0A0G2K4Z7 A0A0U1RRU5 A0A8I5ZZU1 A0A8I6ABN5 A0A8I6AH74 A0A8I6AL23 D4A3U7 D4ADT7 G3V783 G3V7V2 P0C8E4 P43527 P55215 P70618 Q5U303 Q63538 Q66H62 Q6P6S1 Q6TMG5 Q925D6 Q9JHK1 Q9JHX4 Q9WTY9	Aamp Birc2 Birc3 Casp1 Casp2 Casp8 Casp9 Csbp1 Csbp2 Cyld Cyld1 Ich1 Ikbkg Il1bc Il1bce Itch Map2k6 Map3k7 Map3k7ip2 Mapk11 Mapk12 Mapk13 Mapk14 Mkk6 Nemo Nod1 Nod2 RNCASP9 Ripk2 Sapk3 Tab1 Tab2 Tab3 Tnfaip3	Rattus norvegicus (Norway rat)
NIK-->noncanonical NF-kB signaling	26S proteasome non-ATPase regulatory subunit 10 26S proteasome non-ATPase regulatory subunit 11 26S proteasome non-ATPase regulatory subunit 13 26S proteasome non-ATPase regulatory subunit 1 26S proteasome non-ATPase regulatory subunit 2 26S proteasome non-ATPase regulatory subunit 5 26S proteasome non-ATPase regulatory subunit 6 26S proteasome non-ATPase regulatory subunit 8 26S proteasome non-ATPase regulatory subunit 9 26S proteasome regulatory subunit 4 26S proteasome regulatory subunit 6A 26S proteasome regulatory subunit 6B 26S proteasome regulatory subunit 7 26S proteasome regulatory subunit 8 Beta-transducin repeat containing E3 ubiquitin protein ligase Cullin 1 F-box and WD repeat domain containing 11 Inhibitor of nuclear factor kappa-B kinase subunit alpha Mitogen-activated protein kinase kinase kinase 14 NEDD8-activating enzyme E1 catalytic subunit Nuclear factor kappa B subunit 2 Polyubiquitin-B Polyubiquitin-C Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12 Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14 Proteasome 26S subunit, ATPase 6 Proteasome 26S subunit, non-ATPase 3 Proteasome 26S subunit, non-ATPase 7 Proteasome activator complex subunit 1 Proteasome activator complex subunit 2 Proteasome activator subunit 4 Proteasome inhibitor PI31 subunit Proteasome subunit alpha type-1 Proteasome subunit alpha type-2 Proteasome subunit alpha type-3 Proteasome subunit alpha type-4 Proteasome subunit alpha type-5 Proteasome subunit alpha type-6 Proteasome subunit alpha type-7 Proteasome subunit alpha type Proteasome subunit beta type-10 Proteasome subunit beta type-1 Proteasome subunit beta type-2 Proteasome subunit beta type-3 Proteasome subunit beta type-4 Proteasome subunit beta type-5 Proteasome subunit beta type-6 Proteasome subunit beta type-7 Proteasome subunit beta type-8 Proteasome subunit beta type-9 Proteasome subunit beta RELB proto-oncogene, NF-kB subunit S-phase kinase-associated protein 1 Ubiquitin B-like Ubiquitin-conjugating enzyme E2M Ubiquitin-ribosomal protein eS31 fusion protein	A0A0G2JSL0 A0A0G2KAX0 A0A8I5Y0H0 A0A8I5ZM79 A0A8I5ZNE7 A0A8I5ZYZ8 A0A8I6A5Y3 A0A8I6ANR6 A0A8I6G2R1 A0A8I6G6F3 A0A8I6GIW9 B0BN93 D3ZTD1 D4A8H1 F1LMQ3 F1LMZ8 F1M6I7 F7FGV7 G3V6W6 G3V8G2 O88761 P0CG51 P17220 P18420 P18421 P18422 P21670 P28064 P28073 P28075 P28077 P34064 P34067 P40112 P40307 P48004 P60901 P62193 P62198 P62982 Q4FZT9 Q4KM35 Q4V8E2 Q5XIC6 Q5XIU5 Q63347 Q63429 Q63569 Q63570 Q63797 Q63798 Q6PEC4 Q99MI7 Q9JHW0 Q9WTV5 Q9Z2X3	Btrc Chuk Cul1 Fbxw11 LOC100360645 LOC100360846 LOC100365869 Lmp10 Lmp2 Map3k14 Mecl1 Mss1 Nfkb2 Psma1 Psma2 Psma3 Psma4 Psma5 Psma6 Psma7 Psma8 Psmb1 Psmb10 Psmb2 Psmb3 Psmb4 Psmb5 Psmb6 Psmb6l Psmb6l1 Psmb7 Psmb8 Psmb9 Psmc1 Psmc2 Psmc3 Psmc4 Psmc5 Psmc6 Psmd1 Psmd10 Psmd11 Psmd12 Psmd13 Psmd14 Psmd2 Psmd3 Psmd5 Psmd6 Psmd7 Psmd8 Psmd9 Psme1 Psme2 Psme4 Psmf1 Relb Ring12 Rps27a Skp1 Skp1a Sug1 Tbp1 Tbp7 Uba3 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Ube1c Ube2m	Rattus norvegicus (Norway rat)
NGF-stimulated transcription	Cyclic AMP-responsive element-binding protein 1 DNA helicase E3 SUMO-protein ligase EGR2 Ngfi-A binding protein 2 Serine/threonine-protein kinase Sgk1 Serum response factor	A0A8I6B288 D3ZHH8 E9PU01 P15337 P51774 Q06226	Chd4 Creb-1 Creb1 Egr-2 Egr2 Krox-20 Krox20 Nab2 Sgk Sgk1 Srf	Rattus norvegicus (Norway rat)
NGF processing	Beta-nerve growth factor Furin Proprotein convertase subtilisin/kexin type 5 Proprotein convertase subtilisin/kexin type 6	P23377 P25427 P41413 Q63415	Fur Furin Ngf Ngfb Pace4 Pcsk3 Pcsk5 Pcsk6	Rattus norvegicus (Norway rat)
NFG and proNGF binds to p75NTR	Beta-nerve growth factor Tumor necrosis factor receptor superfamily member 16	P07174 P25427	Ngf Ngfb Ngfr Tnfrsf16	Rattus norvegicus (Norway rat)
NF-kB is activated and signals survival	Beta-nerve growth factor Inhibitor of nuclear factor kappa-B kinase subunit beta NF-kappa-B inhibitor alpha Polyubiquitin-B Polyubiquitin-C Sequestosome-1 TNF receptor-associated factor 6 Tumor necrosis factor receptor superfamily member 16 Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein non-specific serine/threonine protein kinase	A0A0G2JYX9 A0A8I6A5Y3 B5DF45 O08623 P07174 P0CG51 P25427 P62982 Q63429 Q63746 Q9QY78	Ikba Ikbkb Ikkb Irak1 LOC100360645 Nfkbia Ngf Ngfb Ngfr Rps27a Sqstm1 Tnfrsf16 Traf6 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Zip	Rattus norvegicus (Norway rat)
NCAM1 interactions	Alpha-2,8-sialyltransferase 8B Collagen type IV alpha 1 chain Collagen type IV alpha 2 chain Collagen type IV alpha 3 chain Collagen type IV alpha 4 chain Collagen type IV alpha 5 chain Neural cell adhesion molecule 1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	A0A0G2K742 A0A8I5ZZ86 A1KQY6 F1LRJ1 F1M6Q3 F1MA59 P13596 Q07977	Col4a1 Col4a2 Col4a3 Col4a4 Col4a5 LOC100911572 Ncam Ncam1 Siat8b St8sia2 St8sia4 Stx	Rattus norvegicus (Norway rat)
NCAM signaling for neurite out-growth	Cyclic AMP-responsive element-binding protein 1 Focal adhesion kinase 1 GTPase HRas GTPase KRas GTPase NRas Growth factor receptor-bound protein 2 Mitogen-activated protein kinase 1 Mitogen-activated protein kinase 3 Neural cell adhesion molecule 1 Receptor-type tyrosine-protein phosphatase alpha Ribosomal protein S6 kinase SOS Ras/Rac guanine nucleotide exchange factor 1 Spectrin alpha chain, non-erythrocytic 1 Spectrin beta chain, non-erythrocytic 2 Spectrin beta chain Spectrin beta chain Spectrin beta chain Spectrin, alpha, erythrocytic 1 Spectrin, beta, non-erythrocytic 5 Tyrosine-protein kinase Fyn	A0A0G2JY25 A0A0G2K677 A0A8I6A7D1 A0A8I6AWM3 D4A3T0 D4A678 G3V6S0 O35346 P08644 P13596 P15337 P16086 P20171 P21708 P62994 P63086 Q03348 Q04970 Q62844 Q9QWN8	Ash Creb-1 Creb1 Erk1 Erk2 Fak Fak1 Fyn Grb2 Hras Hras1 Kras Kras2 Lrp Mapk Mapk1 Mapk3 Ncam Ncam1 Nras Prkm1 Prkm3 Ptk2 Ptpra Rps6ka5 Sos1 Spna2 Spnb3 Spta1 Spta2 Sptan1 Sptb Sptbn1 Sptbn2 Sptbn4 Sptbn5	Rattus norvegicus (Norway rat)
NADE modulates death signalling	14-3-3 protein epsilon Beta-nerve growth factor Caspase-2 Caspase-3 Protein BEX3 Tumor necrosis factor receptor superfamily member 16	P07174 P25427 P55213 P55215 P62260 Q6PDU5	Bex3 Casp2 Casp3 Cpp32 Ich1 Nade Ngf Ngfb Ngfr Ngfrap1 Tnfrsf16 Ywhae	Rattus norvegicus (Norway rat)
N-glycan trimming in the ER and Calnexin/Calreticulin cycle	26S proteasome regulatory subunit 4 Autocrine motility factor receptor Derlin Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase Polyubiquitin-B Polyubiquitin-C Transitional endoplasmic reticulum ATPase UBX domain-containing protein 1 UV excision repair protein RAD23 homolog B Ubiquitin B-like Ubiquitin-ribosomal protein eS31 fusion protein mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	A0A0G2K437 A0A8I6A5Y3 D4AE03 P0CG51 P46462 P62193 P62982 Q499N6 Q4KMA2 Q5RKH9 Q5XI55 Q63429	Amfr Derl1 Engase LOC100360645 Ngly1 Psmc1 Rad23b Rps27a Saks1 Uba80 Ubb Ubbl1 Ubc Ubcep1 Ubcl1 Ubxn1 Vcp	Rattus norvegicus (Norway rat)	G03934XO G25577BM G28233ME G51034LA G86419OL
N-glycan trimming and elongation in the cis-Golgi	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase Glycoprotein endo-alpha-1,2-mannosidase	Q09325 Q5GF25	Gnt1 Manea Mgat1	Rattus norvegicus (Norway rat)	G58161NS
N-Glycan antennae elongation	Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A Alpha-2,8-sialyltransferase 8B Beta-1,4-galactosyltransferase 3 Beta-1,4-galactosyltransferase 4 Beta-1,4-galactosyltransferase 6 Beta-1,4-galactosyltransferase Beta-1,4-galactosyltransferase Beta-galactoside alpha-2,6-sialyltransferase 1 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 MGAT4 family, member C ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	A0A0G2K3K5 B2GV39 D3ZEV3 D4A2A5 G3V8D0 O88419 P13721 P61131 Q07977 Q08834 Q5M854 Q66HH1 Q6P768	B4galt2 B4galt3 B4galt4 B4galt5 B4galt6 Mgat4a Mgat4b Mgat4c Mgat5 Siat1 Siat4c Siat8b St3gal4 St6gal1 St8sia2 St8sia3 Stx	Rattus norvegicus (Norway rat)	G81533KY
Myogenesis	BCL2 interacting protein 2 BOC cell adhesion associated, oncogene regulated Cadherin 15 Cadherin-2 Catenin alpha-2 Catenin beta-1 Cell adhesion molecule-related/down-regulated by oncogenes Cell division control protein 42 homolog Mapk11 protein Mitogen-activated protein kinase 12 Mitogen-activated protein kinase 14 Myoblast determination protein 1 Myocyte enhancer factor 2B Myocyte-specific enhancer factor 2A Myocyte-specific enhancer factor 2C Myocyte-specific enhancer factor 2D Myogenic factor 6 Myogenic factor Myogenin Sperm associated antigen 9 Transcription factor 12 Transcription factor 4 Transcription factor E2-alpha Tyrosine-protein kinase	A0A096MJY4 A0A0G2JYF7 A0A0G2K1P3 A0A0G2K6E8 A0A8I6AM66 D3ZVU3 D4A0Z7 D4A3U7 E9PT20 F7EZT3 O35158 O89038 P19335 P20428 P21677 P51514 P70618 Q02346 Q2MJT0 Q62655 Q63538 Q8CFN2 Q9WU82 Q9Z1Y3	Abl1 Bnip2 Boc Catnb Cdc42 Cdh15 Cdh2 Cdo Cdon Csbp1 Csbp2 Ctnna2 Ctnnb1 Itf2 Mapk11 Mapk12 Mapk14 Mef2a Mef2b Mef2c Mef2d Mrf4 Myf5 Myf6 Myod Myod1 Myog Pan Ptf1c Sapk3 Sef2 Spag9 Tcf12 Tcf3 Tcf4 Tcfe2a	Rattus norvegicus (Norway rat)
MyD88:MAL(TIRAP) cascade initiated on plasma membrane	Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial Mitogen-activated protein kinase kinase kinase 1 TNF receptor-associated factor 6 Toll/interleukin-1 receptor domain-containing adapter protein	B5DF45 D3ZXA5 Q5XIC2 Q62925	Ecsit Map3k1 Mekk Mekk1 Tirap Traf6	Rattus norvegicus (Norway rat)
MyD88-independent TLR4 cascade	Lymphocyte antigen 96 Monocyte differentiation antigen CD14 NAD(+) hydrolase SARM1 TIR domain containing adaptor molecule 2 TIR domain-containing adapter molecule 1 Toll-like receptor 4	D3ZUM2 D3ZXR7 M0RA08 Q56DL5 Q63691 Q9QX05	Cd14 Ly96 Plin3 Sarm1 Ticam1 Ticam2 Tlr4	Rattus norvegicus (Norway rat)
MyD88 cascade initiated on plasma membrane	Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial Mitogen-activated protein kinase kinase kinase 1 TNF receptor-associated factor 6	B5DF45 Q5XIC2 Q62925	Ecsit Map3k1 Mekk Mekk1 Traf6	Rattus norvegicus (Norway rat)
Muscarinic acetylcholine receptors	Muscarinic acetylcholine receptor M1 Muscarinic acetylcholine receptor M2 Muscarinic acetylcholine receptor M3 Muscarinic acetylcholine receptor M4 Muscarinic acetylcholine receptor M5	P08482 P08483 P08485 P08911 P10980	Chrm-1 Chrm-2 Chrm-3 Chrm-4 Chrm-5 Chrm1 Chrm2 Chrm3 Chrm4 Chrm5	Rattus norvegicus (Norway rat)
Multifunctional anion exchangers	Anion exchange transporter Chloride anion exchanger Pendrin Solute carrier family 26 member 11 Solute carrier family 26 member 6 Solute carrier family 26 member 9 Solute carrier family 5 member 12 Sulfate anion transporter 1 Sulfate transporter	A0A1W2Q610 D3Z9I5 D3ZV32 F1LWL8 F1M067 O70531 P45380 Q924C9 Q9R154	Dra Dtdst Pds Sat1 Slc26a1 Slc26a11 Slc26a2 Slc26a3 Slc26a4 Slc26a6 Slc26a7 Slc26a9 Slc5a12	Rattus norvegicus (Norway rat)
Molecules associated with elastic fibres	Aa1018 Bone morphogenetic protein 10 Bone morphogenetic protein 2 Bone morphogenetic protein 4 Bone morphogenetic protein 7 EGF containing fibulin extracellular matrix protein 2 Fibulin 2 Fibulin-5 Growth differentiation factor 5 Integrin beta-1 Integrin beta-3 Integrin beta-6 Integrin beta Integrin beta Integrin subunit alpha 8 Integrin subunit alpha V Latent transforming growth factor beta binding protein 3 Latent transforming growth factor beta binding protein 4 Latent-transforming growth factor beta-binding protein 1 Latent-transforming growth factor beta-binding protein 2 Microfibril associated protein 2 Microfibril associated protein 4 Microfibril associated protein 5 Transforming growth factor beta-1 proprotein Transforming growth factor beta-2 proprotein Transforming growth factor beta-3 proprotein	A0A0G2JVU1 A0A0G2K9S8 A0A8I5ZYG7 A0A8I6AQL1 A0A8I6AVC5 D3Z952 D4A7W8 D4A917 F1LZX9 F7F1E3 G3V6W8 G3V6X1 M0RAY4 O35806 P17246 P49001 P49134 Q00918 Q06826 Q07257 Q07258 Q4AEG6 Q6AYF4 Q7TQ11 Q8R2H2 Q9WVH8	Bmp-2 Bmp-4 Bmp10 Bmp2 Bmp4 Bmp7 Dance Dvr-4 Efemp2 Fbln2 Fbln5 Gdf5 Itga8 Itgav Itgb1 Itgb3 Itgb5 Itgb6 Itgb8 Ltbp1 Ltbp2 Ltbp3 Ltbp4 Mfap2 Mfap4 Mfap5 Tgf-b3 Tgfb1 Tgfb2 Tgfb3 Vtn	Rattus norvegicus (Norway rat)
Mitotic Prophase	Cyclin-dependent kinase 1 G2/mitotic-specific cyclin-B1 Nuclear mitotic apparatus protein 1	F1LW91 P30277 P39951	Ccnb1 Cdc2 Cdc2a Cdk1 Cdkn1 Numa1	Rattus norvegicus (Norway rat)

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