GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 701 - 725 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Advanced glycosylation endproduct receptor signaling
  • A4
  • AD1
  • Ager
  • App
  • Capza1
  • Capza2
  • Hmg-1
  • Hmg1
  • Hmgb1
  • Hmgb1-ps33
  • Hmgb1-ps4
  • Hmgb1l1
  • Hmgb1l2
  • Hmgb1l3
  • Hmgb1l5
  • LOC108349189
  • LOC108350839
  • Rage
  • S100b
Rattus norvegicus (Norway rat)
Nicotinate metabolism
  • Bst1
  • Cd38
  • Mnadk
  • Nadk
  • Nadk2
  • Nadkd1
  • Nadsyn1
  • Nmnat1
  • Nmnat2
  • Nmnat3
  • Nmrk1
  • Nrk1
  • Nt5
  • Nt5e
  • Nte
  • Qns1
  • Qprt
Rattus norvegicus (Norway rat)
HDL clearance
  • Amn
  • Apoa1
  • Cubn
  • Hbp
  • Hdlbp
  • Ifcr
  • Scarb1
Rattus norvegicus (Norway rat)
SUMOylation of DNA replication proteins
  • Aaas
  • Aik2
  • Aim1
  • Airk2
  • Ark2
  • Aurkb
  • Birc5
  • Cdca8
  • Gp210
  • Incenp
  • LOC683983
  • Mrnp41
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Pcna
  • Pcnt1
  • Pias3
  • Pias4
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Rangap1
  • Smt3a
  • Smt3h2
  • Stk1
  • Stk12
  • Stk5
  • Sumo1
  • Sumo2
  • Sumo3
  • Tmem48
  • Top-2
  • Top1
  • Top2
  • Top2a
  • Top2b
  • Tpr
  • Ubce9
  • Ube2i
Rattus norvegicus (Norway rat)
Vasopressin regulates renal water homeostasis via Aquaporins
  • Aqp1
  • Aqp2
  • Aqp3
  • Aqp4
  • Avp
  • Avpr2
  • Chip28
  • Gnas
  • Gnas1
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Myo5b
  • Pkacb
  • Prkaca
  • Prkacb
  • Prkar1a
  • Prkar1b
  • Prkar2a
  • Prkar2b
  • Rab11
  • Rab11a
  • Rab11fip2
Rattus norvegicus (Norway rat)
Class C/3 (Metabotropic glutamate/pheromone receptors)
  • Casr
  • Gabbr1
  • Gabbr2
  • Gpr51
  • Gpr70
  • Gpr71
  • Gprc1a
  • Gprc1b
  • Gprc1c
  • Gprc1d
  • Gprc1e
  • Gprc1f
  • Gprc1g
  • Gprc1h
  • Gprc2a
  • Gprc6a
  • Grm1
  • Grm2
  • Grm3
  • Grm4
  • Grm5
  • Grm6
  • Grm7
  • Grm8
  • Mglur1
  • Mglur2
  • Mglur3
  • Mglur4
  • Mglur5
  • Mglur6
  • Mglur7
  • Mglur8
  • Pcar1
  • T1r1
  • T1r2
  • T1r3
  • T2r16
  • T2r17
  • T2r18
  • T2r20
  • T2r38
  • Tas1r1
  • Tas1r2
  • Tas1r3
  • Tas2r1
  • Tas2r106
  • Tas2r108
  • Tas2r118
  • Tas2r119
  • Tas2r12
  • Tas2r120
  • Tas2r121
  • Tas2r126
  • Tas2r13
  • Tas2r130
  • Tas2r135
  • Tas2r136
  • Tas2r137
  • Tas2r138
  • Tas2r139
  • Tas2r140
  • Tas2r144
  • Tas2r145
  • Tas2r16
  • Tas2r18
  • Tas2r19
  • Tas2r26
  • Tas2r28
  • Tas2r3
  • Tas2r31
  • Tas2r32
  • Tas2r38
  • Tas2r39
  • Tas2r4
  • Tas2r40
  • Tas2r41
  • Tas2r6
  • Tas2r7
  • Tr1
  • Tr2
  • Tr3
Rattus norvegicus (Norway rat)
HCN channels
  • Hcn1
  • Hcn2
  • Hcn3
  • Hcn4
Rattus norvegicus (Norway rat)
Axonal growth inhibition (RHOA activation)
  • Arha
  • Arha2
  • Arhgdia
  • Lingo1
  • Mag
  • Mcf2
  • Ngfr
  • Nogo
  • Omg
  • Rhoa
  • Rtn4
  • Tnfrsf16
Rattus norvegicus (Norway rat)
Synthesis of very long-chain fatty acyl-CoAs
  • Acs1
  • Acs2
  • Acs3
  • Acs4
  • Acs5
  • Acsbg1
  • Acsbg2
  • Acsf3
  • Acsl1
  • Acsl2
  • Acsl3
  • Acsl4
  • Acsl5
  • Acsl6
  • ELOVL1
  • ELOVL3
  • Edh17b3
  • Elovl1
  • Elovl2
  • Elovl3
  • Elovl5
  • Elovl6
  • Elovl7
  • Face
  • Facl2
  • Facl3
  • Facl4
  • Facl5
  • Facl6
  • Gpsn2
  • Grlacs
  • Hacd1
  • Hacd3
  • Hacd4
  • Hsd17b12
  • Hsd17b3
  • LOC100365676
  • Lce
  • Ssc2
  • Tecr
  • Tecrl
Rattus norvegicus (Norway rat)
Clearance of dopamine
  • Maoa
  • Slc6a3
Rattus norvegicus (Norway rat)
Glycosphingolipid catabolism
  • AABR07013255.1
  • Arsa
  • Arsb
  • Arse
  • Arsg
  • Arsi
  • Arsj
  • Arsk
  • Arsl
  • Asah1
  • Asah2
  • Cca1
  • Ctsa
  • Enpp7
  • Galc
  • Gba
  • Gba1
  • Gba2
  • Gba3
  • Gla
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gm2a
  • Hexa
  • Hexb
  • M6pr
  • Neu1
  • Neu2
  • Neu3
  • Neu4
  • Psap
  • Sgp1
  • Smpd1
  • Smpd2
  • Smpd3
  • Smpd4
  • Sts
  • Sumf1
  • Sumf2
Rattus norvegicus (Norway rat)
Signaling by Hippo
  • Amot
  • Amotl1
  • Amotl2
  • Casp3
  • Cpp32
  • Dvl2
  • LOC100361515
  • Lats1
  • Lats2
  • Mob1a
  • Mob1b
  • Mobk1b
  • Mobkl1b
  • Mst2
  • Nphp4
  • Sav1
  • Stk3
  • Stk4
  • Tjp1
  • Tjp2
  • Ww45
  • Wwc1
  • Wwtr1
  • Yap
  • Yap1
  • Yap65
  • Ywhab
  • Ywhae
Rattus norvegicus (Norway rat)
Formation of annular gap junctions
  • Ap2m1
  • Clta
  • Cltb
  • Cltc
  • Cxn-43
  • Dab2
  • Dnm
  • Dnm1
  • Dnm2
  • Doc2
  • Dyn2
  • Gja1
Rattus norvegicus (Norway rat)
GABA synthesis, release, reuptake and degradation
  • Cplx1
  • Dnajc5
  • Gad1
  • Gad2
  • Gad65
  • Gad67
  • Hsc70
  • Hsc73
  • Hspa8
  • Rab3a
  • Rim1
  • Rims1
  • Sap
  • Slc32a1
  • Snap
  • Snap25
  • Stx1a
  • Stxbp1
  • Syb2
  • Syt1
  • Unc18a
  • Vamp2
  • Vgat
  • Viaat
Rattus norvegicus (Norway rat)
Telomere Extension By Telomerase
  • Acd
  • Ankrd28
  • Ccna1
  • Ccna2
  • Cdk2
  • Cdkn2
  • Dkc1
  • Gar1
  • LOC100360065
  • Nap57
  • Nola1
  • Nop10
  • Pif1
  • Pot1
  • Ppp6c
  • Ppp6r3
  • Ppp6r3-ps1
  • Ppv
  • Rap1
  • Rtel1
  • Saps3-ps1
  • Shq1
  • Tcab1
  • Terf2
  • Terf2ip
  • Tert
  • Wdr79
  • Wrap53
Rattus norvegicus (Norway rat)
APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1
  • Aik
  • Aik2
  • Aim1
  • Airk1
  • Airk2
  • Anapc1
  • Anapc15
  • Anapc16
  • Anapc2
  • Anapc4
  • Anapc5
  • Anapc7
  • Ark1
  • Ark2
  • Aura
  • Aurka
  • Aurkb
  • Ayk1
  • Btak
  • Cdc16
  • Cdc20
  • Cdc23
  • Cdc26
  • Cdc27
  • Fzr1
  • Iak1
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • LOC100366017
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Plk
  • Plk1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Pttg
  • Pttg1
  • Rb-1
  • Rb1
  • Ring12
  • Rps27a
  • Skp2
  • Stk1
  • Stk12
  • Stk15
  • Stk5
  • Stk6
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Ube2c
  • Ube2d1
  • Ube2e1
  • Ube2s
Rattus norvegicus (Norway rat)
Erythrocytes take up oxygen and release carbon dioxide
  • Ae1
  • Aqp1
  • Ca1
  • Ca2
  • Ca4
  • Car1
  • Chip28
  • Hba-a1
  • Hba1
  • Hbb
  • Rh50
  • Rhag
  • Slc4a1
Rattus norvegicus (Norway rat)
Erythropoietin activates RAS
  • Ash
  • Crkl
  • Epo
  • Epor
  • Grb2
  • Irs2
  • Jak2
  • Lyn
  • Rapgef1
  • Shc1
  • Vav
  • Vav1
Rattus norvegicus (Norway rat)
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
  • Man1a1
  • Man1a2
  • Man1c1
Rattus norvegicus (Norway rat)
Chylomicron remodeling
  • Apoa1
  • Apoa2
  • Apoa4
  • Apoa5
  • Apob
  • Apoc2
  • Apoc3
  • Apoe
  • Gpihbp1
  • Lpl
  • Rap3
Rattus norvegicus (Norway rat)
Reuptake of GABA
  • Gabt1
  • Gabt2
  • Gabt3
  • Gat-1
  • Gat-2
  • Gat-3
  • Gat-b
  • Gat1
  • Slc6a1
  • Slc6a11
  • Slc6a12
  • Slc6a13
Rattus norvegicus (Norway rat)
RET signaling
  • Artn
  • Ash
  • Bmk1
  • Dok1
  • Dok2
  • Dok4
  • Dok5
  • Dok6
  • Enigma
  • Erk5
  • Frs2
  • Gab1
  • Gab2
  • Gdnf
  • Gdnfra
  • Gfra1
  • Gfra2
  • Gfra3
  • Gfra4
  • Grb10
  • Grb2
  • Grb7
  • Irs2
  • Lim1
  • Mapk7
  • Nrtn
  • Nshc
  • Pdlim7
  • Pik3ca
  • Pik3cb
  • Pik3cd
  • Pik3r1
  • Pik3r2
  • Pik3r3
  • Pkacb
  • Pkca
  • Plcg1
  • Prkaca
  • Prkacb
  • Prkca
  • Prosap2
  • Pspn
  • Ptpn11
  • Rap1gap
  • Ret
  • Retl1
  • Shank3
  • Shc1
  • Shc3
  • Shcc
  • Sos1
  • Src
  • Trnr1
Rattus norvegicus (Norway rat)
Transport of the SLBP independent Mature mRNA
  • Aaas
  • Alyref
  • Cbp20
  • Cbp80
  • Eif4e
  • Gp210
  • LOC683983
  • Mrnp41
  • Ncbp1
  • Ncbp2
  • Ndc1
  • Npap60
  • Nup107
  • Nup121
  • Nup133
  • Nup153
  • Nup155
  • Nup160
  • Nup188
  • Nup205
  • Nup210
  • Nup214
  • Nup35
  • Nup37
  • Nup42
  • Nup43
  • Nup50
  • Nup53
  • Nup54
  • Nup58
  • Nup62
  • Nup84
  • Nup85
  • Nup88
  • Nup93
  • Nup98
  • Nupl1
  • Nupl2
  • Nxf1
  • Pcnt1
  • Pom121
  • Pom210
  • Rae1
  • Ranbp2
  • Sec13
  • Sec13l1
  • Tap
  • Tmem48
  • Tpr
Rattus norvegicus (Norway rat)
Interleukin-33 signaling
  • Fit1
  • Il1rap
  • Il1rl1
  • Il33
Rattus norvegicus (Norway rat)
NRAGE signals death through JNK
  • Abr
  • Akap13
  • Arhgef1
  • Arhgef10
  • Arhgef10l
  • Arhgef11
  • Arhgef12
  • Arhgef15
  • Arhgef16
  • Arhgef17
  • Arhgef19
  • Arhgef2
  • Arhgef25
  • Arhgef26
  • Arhgef3
  • Arhgef33
  • Arhgef37
  • Arhgef38
  • Arhgef39
  • Arhgef5
  • Arhgef6
  • Arhgef7
  • Arhgef9
  • Bad
  • Bcl2l11
  • Bim
  • Bod
  • Duo
  • Ect2
  • Ehsh1
  • Fgd1
  • Fgd2
  • Fgd3
  • Fgd4
  • Geft
  • Gna13
  • Grf2
  • Hapip
  • Itsn
  • Itsn1
  • Jnk1
  • Kalrn
  • LOC687105
  • Lsc
  • Mapk8
  • Mcf2
  • Mcf2l
  • Net1
  • Ngef
  • Obscn
  • Ost
  • Pak3bp
  • Pixb
  • Plekhg2
  • Plekhg5
  • Prex1
  • Prkm8
  • RGD1565043
  • Rac
  • Rac1
  • Rasgrf2
  • Rt13
  • Sos1
  • Sos2
  • Tech
  • Tiam1
  • Tiam2
  • Trio
  • Vav
  • Vav1
  • Vav2
  • Vav3
Rattus norvegicus (Norway rat)

About Release Notes Help Feedback

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International


GlyCosmos Portal v4.0.0

Last updated: August 19, 2024