GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 776 - 800 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism ▼ GlyTouCan ID
Ubiquitin-dependent degradation of Cyclin D
  • Ccnd1
  • Cdk4
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Ring12
  • Rps27a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
Amine ligand-binding receptors
  • Gpr143
  • Gpr58
  • Ta1
  • Ta10
  • Ta11
  • Ta3
  • Ta4
  • Taar1
  • Taar2
  • Taar3
  • Taar5
  • Taar6
  • Taar8a
  • Taar8c
  • Taar9
  • Tar1
  • Tar10
  • Tar11
  • Tar3
  • Tar4
  • Trar1
  • Trar10
  • Trar11
  • Trar3
  • Trar4
Rattus norvegicus (Norway rat)
GLI3 is processed to GLI3R by the proteasome
  • Btrc
  • Csnk1a1
  • Cul1
  • Gli3
  • Gsk3b
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Pkacb
  • Prkaca
  • Prkacb
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rbx1
  • Ring12
  • Rps27a
  • Skp1
  • Skp1a
  • Sufu
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
ALPK1 signaling pathway
  • Alpk1
  • LOC100360645
  • Map3k7
  • Map3k7ip2
  • Rps27a
  • Tab1
  • Tab2
  • Tab3
  • Tifa
  • Traf6
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion
  • Farp2
  • Fyn
  • Nrp1
  • Pip5k1c
  • Plxna1
  • Plxna2
  • Plxna3
  • Plxna4
  • Plxna4a
  • Sema3a
  • Tln1
Rattus norvegicus (Norway rat)
Regulation of KIT signaling
  • Aps
  • Ash
  • Cbl
  • Fyn
  • Grb2
  • KIT
  • Kit
  • Kitl
  • Kitlg
  • Lck
  • Lyn
  • Mgf
  • Pkca
  • Prkca
  • Ptph6
  • Ptpn6
  • Sh2b2
  • Sos1
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
RHOBTB1 GTPase cycle
  • Cct2
  • Cct7
  • Cctb
  • Cops1
  • Cops2
  • Cops4
  • Cpsf7
  • Csn1
  • Csn2
  • Csn4
  • Cul3
  • Gps1
  • Hnrnpc
  • Hnrpc
  • LOC100365546
  • Myo6
  • Pde5
  • Pde5a
  • Rbbp6
  • Rbmx
  • Rbmxrt
  • Rhobtb1
  • Rnf20
  • Rock1
  • Rock2
  • Sfrs10
  • Spen
  • Srrm1
  • Stk38
  • Tra2b
  • Trip15
  • Trp
  • Txnl1
  • Vim
Rattus norvegicus (Norway rat)
Receptor Mediated Mitophagy
  • Apg12l
  • Atg12
  • Atg5
  • Ck2n
  • Csnk2a1
  • Csnk2a2
  • Csnk2b
  • Fundc1
  • Map1alc3
  • Map1lc3
  • Map1lc3a
  • Map1lc3b
  • Pgam5
  • Src
  • Ulk1
Rattus norvegicus (Norway rat)
Negative regulation of FGFR1 signaling
  • Ash
  • Cbl
  • Erk1
  • Erk2
  • FGF22
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-5
  • Fgf-9
  • Fgf1
  • Fgf10
  • Fgf17
  • Fgf2
  • Fgf20
  • Fgf22
  • Fgf23
  • Fgf3
  • Fgf4
  • Fgf5
  • Fgf5c
  • Fgf5d
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf9
  • Fgfa
  • Fgfr1
  • Flg
  • Frs2
  • Grb2
  • Kl
  • LOC100360645
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • Ptpn11
  • Rps27a
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling
  • Creb-1
  • Creb1
  • Mapkapk1a
  • Rps6ka1
  • Rps6ka2
  • Rps6ka3
  • Rps6ka6
  • Rsk1
Rattus norvegicus (Norway rat)
Toll Like Receptor 9 (TLR9) Cascade
  • Eea1
  • Pik3c3
  • Pik3r4
  • Rbsn
  • Tlr9
  • Vps34
  • Zfyve20
Rattus norvegicus (Norway rat)
BH3-only proteins associate with and inactivate anti-apoptotic BCL-2 members
  • Bad
  • Bcl2l1
  • Bcl2l11
  • Bclx
  • Bid
  • Bim
  • Blc2l
  • Bod
  • Noxa
  • Pmaip1
Rattus norvegicus (Norway rat)
Laminin interactions
  • Egfl3
  • ITGA3B
  • Itga3
  • Itga6
  • Itga7
  • Itgb1
  • Itgb4
  • Lama4
  • Megf6
  • Nid2
Rattus norvegicus (Norway rat)
RUNX3 regulates CDKN1A transcription
  • Madh3
  • Madh4
  • P53
  • Runx3
  • Smad3
  • Smad4
  • Tgfb1
  • Tp53
  • Zfhx3
Rattus norvegicus (Norway rat)
Josephin domain DUBs
  • Atxn3
  • Josd1
  • Josd2
  • LOC100360645
  • Mjd
  • Park2
  • Prkn
  • Rad23a
  • Rad23b
  • Rps27a
  • Sca3
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Vcp
Rattus norvegicus (Norway rat)
SUMOylation of transcription cofactors
  • Bars
  • Cap1
  • Casp8ap2
  • Cbx2
  • Cbx4
  • Cbx8
  • Ctbp1
  • Ctbp3
  • Daxx
  • Ddx17
  • Ddx5
  • Ep300
  • Mbd1
  • Miz1
  • Mkl1
  • Mrtfa
  • Ncoa1
  • Npm1
  • Nrip1
  • Park7
  • Phc1
  • Phc2
  • Phc3
  • Pias1
  • Pias2
  • Pias3
  • Pias4
  • Piasx
  • Ring1
  • Ring1b
  • Rnf1
  • Rnf2
  • Safb
  • Safb1
  • Scml2
  • Sin3a
  • Smt3a
  • Smt3h2
  • Sumo1
  • Sumo2
  • Sumo3
  • Topors
  • Ubce9
  • Ube2i
  • Uhrf2
  • Zfp131
Rattus norvegicus (Norway rat)
Prostacyclin signalling through prostacyclin receptor
  • Ptgir
Rattus norvegicus (Norway rat)
Frs2-mediated activation
  • Braf
  • Crkl
  • Erk1
  • Erk2
  • Frs2
  • Krev1
  • Map2k1
  • Map2k2
  • Mapk
  • Mapk1
  • Mapk3
  • Mek1
  • Mek2
  • Mkk2
  • Ngf
  • Ngfb
  • Ntrk1
  • Prkm1
  • Prkm3
  • Prkmk1
  • Prkmk2
  • Rap1a
  • Rapgef1
  • Trk
  • Trka
  • Ywhab
Rattus norvegicus (Norway rat)
Lysosomal oligosaccharide catabolism
  • Man2b1
  • Man2b2
  • Man2c1
  • Manba
  • Mrfap1
Rattus norvegicus (Norway rat)
HS-GAG degradation
  • Agrin
  • Agrn
  • Glb1
  • Glb1l
  • Glb1l2
  • Glb1l3
  • Gpc1
  • Gpc2
  • Gpc3
  • Gpc4
  • Gpc5
  • Gpc6
  • Gus
  • Gusb
  • Hep
  • Hpse
  • Hpse2
  • Hspg1
  • Ids
  • Idua
  • LOC100363795
  • Naglu
  • Sdc1
  • Sdc2
  • Sdc3
  • Sdc4
  • Sgsh
  • Synd1
  • Synd2
  • Synd3
  • Synd4
Rattus norvegicus (Norway rat)
Pentose phosphate pathway
  • Dera
  • G6pd
  • G6pdx
  • Pgd
  • Pgls
  • Pgm2
  • RBKS
  • Rbks
  • Rpe
  • Rpia
  • Taldo1
  • Tkt
Rattus norvegicus (Norway rat)
PERK regulates gene expression
  • Eif2a
  • Eif2ak3
  • Eif2g
  • Eif2s1
  • Eif2s2
  • Eif2s3
  • Eif2s3x
  • Pek
  • Perk
Rattus norvegicus (Norway rat)
Regulation of RUNX1 Expression and Activity
  • Aml1
  • Cbfa2
  • Cbfb
  • Ccnd1
  • Ccnd2
  • Ccnd3
  • Cdk6
  • Pml
  • Ptpn11
  • Runx1
  • Vin-1
Rattus norvegicus (Norway rat)
Ca2+ pathway
  • CaMIII
  • Calm3
  • Calna
  • Cam3
  • Camc
  • Camk2a
  • Catnb
  • Cna2
  • Cnb
  • Ctnnb1
  • Fzd2
  • Fzd3
  • Fzd4
  • Fzd5
  • Fzd6
  • Gna0
  • Gnao
  • Gnao1
  • Gnat2
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Kras
  • Kras2
  • Lef1
  • Map3k7
  • Nfatc1
  • Nlk
  • Pde6a
  • Pde6b
  • Pde6g
  • Ppp3ca
  • Ppp3cb
  • Ppp3r1
  • RGD1560225
  • Tcf7l2
  • Wnt-5a
  • Wnt11
  • Wnt5a
Rattus norvegicus (Norway rat)
G beta:gamma signalling through CDC42
  • Arhgef6
  • Cdc42
  • Gnb1
  • Gnb2
  • Gnb3
  • Gnb4
  • Gnb5
  • Gng10-ps1
  • Gng11
  • Gng12
  • Gng3
  • Gng4
  • Gng5
  • Gng5-ps4
  • Gng7
  • Gng8
  • Gng9
  • Gngt1
  • Gngt11
  • Gngt5
  • Gngt7
  • Gngt9
  • Pak1
Rattus norvegicus (Norway rat)

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

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