GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **1376 - 1400** of **2090** in total

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Pathway Name ▼	Protein Name	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
Formyl peptide receptors bind formyl peptides and many other ligands	Amyloid-beta precursor protein Annexin A1 Heme-binding protein 1 Humanin N-formyl peptide receptor 2 N-formyl peptide receptor 3 Serum amyloid A-1 protein fMet-Leu-Phe receptor	P04083 P05067 P0DJI8 P21462 P25089 P25090 Q8IVG9 Q9NRV9	A4 AD1 ANX1 ANXA1 APP FPR1 FPR2 FPR3 FPRH1 FPRL1 FPRL2 HBP HEBP1 HN LPC1 LXA4R MT-RNR2 SAA1	Homo sapiens (human)
Formation of xylulose-5-phosphate	Aldo-keto reductase family 1 member A1 L-xylulose reductase Lambda-crystallin homolog Sorbitol dehydrogenase Xylulose kinase	O75191 P14550 Q00796 Q7Z4W1 Q9Y2S2	AKR1A1 ALDR1 ALR CRY CRYL1 DCXR SDR20C1 SORD XYLB	Homo sapiens (human)
Formation of tubulin folding intermediates by CCT/TriC	Putative tubulin-like protein alpha-4B T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit eta T-complex protein 1 subunit gamma T-complex protein 1 subunit theta T-complex protein 1 subunit zeta-2 T-complex protein 1 subunit zeta Tubulin alpha chain-like 3 Tubulin alpha-1A chain Tubulin alpha-1B chain Tubulin alpha-1C chain Tubulin alpha-3C chain Tubulin alpha-3D chain Tubulin alpha-3E chain Tubulin alpha-4A chain Tubulin alpha-8 chain Tubulin beta-1 chain Tubulin beta-2A chain Tubulin beta-2B chain Tubulin beta-3 chain Tubulin beta-4A chain Tubulin beta-4B chain Tubulin beta-6 chain	A6NHL2 P04350 P0DPH7 P0DPH8 P17987 P40227 P48643 P49368 P50990 P50991 P68363 P68366 P68371 P78371 Q13509 Q13885 Q6PEY2 Q71U36 Q92526 Q99832 Q9BQE3 Q9BUF5 Q9BVA1 Q9H4B7 Q9H853 Q9NY65	99D8.1 C21orf112 CCT1 CCT2 CCT3 CCT4 CCT5 CCT6 CCT6A CCT6B CCT7 CCT8 CCTA CCTB CCTD CCTE CCTG CCTH CCTQ CCTZ KIAA0002 KIAA0098 NIP7-1 SRB TCP1 TRIC5 TUBA1 TUBA1A TUBA1B TUBA1C TUBA2 TUBA3 TUBA3C TUBA3D TUBA3E TUBA4 TUBA4A TUBA4B TUBA6 TUBA8 TUBAL2 TUBAL3 TUBB1 TUBB2 TUBB2A TUBB2B TUBB2C TUBB3 TUBB4 TUBB4A TUBB4B TUBB5 TUBB6	Homo sapiens (human)
Formation of the ureteric bud	Bone morphogenetic protein 4 Eyes absent homolog 1 Forkhead box protein C1 Forkhead box protein C2 GDNF family receptor alpha-1 Glial cell line-derived neurotrophic factor Gremlin-1 Homeobox protein Hox-A11 Homeobox protein Hox-C11 Homeobox protein Hox-D11 Homeobox protein SIX1 Homeobox protein SIX2 Integrin alpha-8 Integrin beta-1 Nephronectin Paired box protein Pax-2 Protein Wnt-11 Proto-oncogene tyrosine-protein kinase receptor Ret Roundabout homolog 2 Sal-like protein 1 Slit homolog 2 protein	O43248 O60565 O94813 O96014 P05556 P07949 P12644 P31270 P31277 P39905 P53708 P56159 Q02962 Q12948 Q15475 Q6UXI9 Q99502 Q99958 Q9HCK4 Q9NPC8 Q9NSC2	BMP2B BMP4 CDHF12 CDHR16 CKTSF1B1 DAND2 DRM DVR4 EGFL6L EYA1 FKHL14 FKHL7 FNRB FOXC1 FOXC2 FREAC3 GDNF GDNFRA GFRA1 GREM1 HOX1I HOX3H HOX4F HOXA11 HOXC11 HOXD11 ITGA8 ITGB1 KIAA1568 MDF2 MFH1 MSK12 NPNT PAX2 POEM PTC RET RETL1 ROBO2 SAL1 SALL1 SIX1 SIX2 SLIL3 SLIT2 TRNR1 WNT11 ZNF794	Homo sapiens (human)
Formation of the ternary complex, and subsequently, the 43S complex	Eukaryotic translation initiation factor 1A, X-chromosomal Eukaryotic translation initiation factor 2 subunit 1 Eukaryotic translation initiation factor 2 subunit 2 Eukaryotic translation initiation factor 2 subunit 3 Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit D Eukaryotic translation initiation factor 3 subunit E Eukaryotic translation initiation factor 3 subunit F Eukaryotic translation initiation factor 3 subunit G Eukaryotic translation initiation factor 3 subunit H Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Eukaryotic translation initiation factor 3 subunit K Eukaryotic translation initiation factor 3 subunit L Eukaryotic translation initiation factor 3 subunit M Ribosomal protein eS27-like Small ribosomal subunit protein eS10 Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19 Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS24 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS27 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS4, X isoform Small ribosomal subunit protein eS4, Y isoform 1 Small ribosomal subunit protein eS4, Y isoform 2 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS8 Small ribosomal subunit protein uS9 Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O00303 O15371 O15372 O75821 O75822 P05198 P08708 P08865 P15880 P20042 P22090 P23396 P25398 P39019 P41091 P42677 P46781 P46782 P46783 P47813 P55884 P60228 P60866 P61247 P62081 P62241 P62244 P62249 P62263 P62266 P62269 P62273 P62277 P62280 P62701 P62753 P62841 P62847 P62851 P62854 P62857 P62861 P62979 P63220 Q13347 Q14152 Q71UM5 Q7L2H7 Q8TD47 Q99613 Q9UBQ5 Q9Y262	CCG2 D6S218E EIF1A EIF1AX EIF2A EIF2B EIF2G EIF2S1 EIF2S2 EIF2S3 EIF3A EIF3B EIF3C EIF3D EIF3E EIF3EIP EIF3F EIF3G EIF3H EIF3I EIF3J EIF3K EIF3L EIF3M EIF3S1 EIF3S10 EIF3S12 EIF3S2 EIF3S3 EIF3S4 EIF3S5 EIF3S6 EIF3S6IP EIF3S7 EIF3S8 EIF3S9 EIF4C FAU FTE1 HFLB5 INT6 KIAA0139 LAMBR LAMR1 MFTL MPS1 PCID1 RIG RPS10 RPS11 RPS12 RPS13 RPS14 RPS15 RPS15A RPS16 RPS17 RPS17L RPS18 RPS19 RPS2 RPS20 RPS21 RPS23 RPS24 RPS25 RPS26 RPS27 RPS27A RPS27L RPS28 RPS29 RPS3 RPS3A RPS4 RPS4X RPS4Y RPS4Y1 RPS4Y2 RPS4Y2P RPS5 RPS6 RPS7 RPS8 RPS9 RPSA SCAR TRIP1 UBA80 UBCEP1	Homo sapiens (human)
Formation of the posterior neural plate	Fibroblast growth factor 8 Homeobox protein GBX-2 Homeobox protein OTX2 POU domain, class 3, transcription factor 1 Protein Wnt-3a T-box transcription factor TBX6 Transcription factor SOX-1 Transcription factor SOX-2 Zinc finger E-box-binding homeobox 2 Zinc finger protein 521	O00570 O60315 O95947 P32243 P48431 P52951 P55075 P56704 Q03052 Q96K83	AIGF EHZF FGF8 GBX2 KIAA0569 LIP3 OCT6 OTF6 OTX2 POU3F1 SIP1 SOX1 SOX2 TBX6 WNT3A ZEB2 ZFHX1B ZFX1B ZNF521	Homo sapiens (human)
Formation of the nephric duct	Bone morphogenetic protein 4 Catenin beta-1 DNA-binding protein inhibitor ID-4 Fibroblast growth factor 2 Histone-lysine N-methyltransferase MECOM Homeobox protein EMX2 Homeobox protein Hox-A6 Homeobox protein Hox-B4 LIM/homeobox protein Lhx1 Nephronectin Paired box protein Pax-2 Paired box protein Pax-8 Placenta-specific gene 8 protein Protein odd-skipped-related 1 Proto-oncogene tyrosine-protein kinase receptor Ret Protocadherin-19 Trans-acting T-cell-specific transcription factor GATA-3 WAP four-disulfide core domain protein 2	P07949 P09038 P12644 P17483 P23771 P31267 P35222 P47928 P48742 Q02962 Q03112 Q04743 Q06710 Q14508 Q6UXI9 Q8TAB3 Q8TAX0 Q9NZF1	BHLHB27 BMP2B BMP4 CDHF12 CDHR16 CTNNB CTNNB1 DVR4 EGFL6L EMX2 EVI1 FGF2 FGFB GATA3 HE4 HOX1B HOX2F HOXA6 HOXB4 ID4 KIAA1313 LHX1 LIM-1 LIM1 MDS1 MECOM NPNT ODD OSR1 PAX2 PAX8 PCDH19 PLAC8 POEM PRDM3 PTC RET WAP5 WFDC2	Homo sapiens (human)
Formation of the cornified envelope	Calpain small subunit 1 Calpain-1 catalytic subunit Caspase-14 Chymotrypsin-like elastase family member 2A Corneodesmosin Cornifin-A Cornifin-B Cystatin-A Desmocollin-1 Desmocollin-2 Desmocollin-3 Desmoglein-1 Desmoglein-2 Desmoglein-3 Desmoglein-4 Desmoplakin Elafin Envoplakin Filaggrin Furin Involucrin Junction plakoglobin Kallikrein-12 Kallikrein-13 Kallikrein-14 Kallikrein-5 Kallikrein-8 Kazrin Late cornified envelope protein 1A Late cornified envelope protein 1B Late cornified envelope protein 1C Late cornified envelope protein 1D Late cornified envelope protein 1E Late cornified envelope protein 1F Late cornified envelope protein 2A Late cornified envelope protein 2B Late cornified envelope protein 2C Late cornified envelope protein 2D Late cornified envelope protein 3A Late cornified envelope protein 3B Late cornified envelope protein 3C Late cornified envelope protein 3D Late cornified envelope protein 3E Late cornified envelope protein 4A Late cornified envelope protein 5A Late cornified envelope protein 6A Late cornified envelope-like proline-rich protein 1 Lipase member J Lipase member K Lipase member M Lipase member N Loricrin Periplakin Plakophilin-1 Plakophilin-2 Plakophilin-3 Plakophilin-4 Proprotein convertase subtilisin/kexin type 6 Prostasin Protein-glutamine gamma-glutamyltransferase 5 Protein-glutamine gamma-glutamyltransferase K Repetin Serine protease inhibitor Kazal-type 5 Serine protease inhibitor Kazal-type 6 Serine protease inhibitor Kazal-type 9 Small proline-rich protein 2A Small proline-rich protein 2B Small proline-rich protein 2D Small proline-rich protein 2E Small proline-rich protein 2F Small proline-rich protein 2G Small proline-rich protein 3 Suppressor of tumorigenicity 14 protein Trichohyalin p53 apoptosis effector related to PMP-22	A0A183 O14633 O43548 O60259 O60437 P01040 P04632 P07384 P07476 P08217 P09958 P14923 P15924 P19957 P20930 P22528 P22531 P22532 P22735 P23490 P29122 P31944 P32926 P35321 P35325 P35326 Q02413 Q02487 Q07283 Q08554 Q13835 Q14126 Q14574 Q15517 Q16651 Q5DT21 Q5T5A8 Q5T5B0 Q5T751 Q5T752 Q5T753 Q5T754 Q5T7P2 Q5T7P3 Q5T871 Q5TA76 Q5TA77 Q5TA78 Q5TA79 Q5TA81 Q5TA82 Q5TCM9 Q5VXI9 Q5VXJ0 Q5VYY2 Q5W064 Q674X7 Q6UWN8 Q6XPR3 Q86SJ6 Q92817 Q96FX8 Q96RM1 Q99569 Q99959 Q9BYE3 Q9BYE4 Q9NQ38 Q9P0G3 Q9UBC9 Q9UKR0 Q9UKR3 Q9Y337 Q9Y446 Q9Y5Y6	C1orf196 C1orf44 CANPL1 CAPN1 CAPN4 CAPNS CAPNS1 CASP14 CDHF1 CDHF13 CDHF2 CDHF3 CDHF4 CDHF5 CDHF6 CDSN CELA2A CSTA CTNNG DP3 DSC1 DSC2 DSC3 DSC4 DSG1 DSG2 DSG3 DSG4 DSP ELA2A EVPL FLG FUR FURIN IVL JUP KAZ KAZN KCP1 KIAA0568 KIAA1026 KLK12 KLK13 KLK14 KLK5 KLK8 KLKL4 KLKL5 KLKL6 KRTCAP1 KTG LCE1A LCE1B LCE1C LCE1D LCE1E LCE1F LCE2A LCE2B LCE2C LCE2D LCE3A LCE3B LCE3C LCE3D LCE3E LCE4A LCE5A LCE6A LEKTI2 LELP1 LEP1 LEP10 LEP11 LEP12 LEP13 LEP14 LEP15 LEP16 LEP17 LEP18 LEP2 LEP3 LEP4 LEP5 LEP6 LEP8 LEP9 LIPJ LIPK LIPL1 LIPL2 LIPL3 LIPL4 LIPM LIPN LOR LORICRIN LRN NRPN PACE PACE4 PCSK3 PCSK6 PERP PI3 PIGPC1 PKP1 PKP2 PKP3 PKP4 PPL PRSS14 PRSS19 PRSS8 RPTN SCTE SNC19 SPINK5 SPINK6 SPINK9 SPRC SPRL1A SPRL1B SPRL2A SPRL3A SPRL4A SPRL5A SPRL6A SPRL6B SPRR1A SPRR1B SPRR2A SPRR2B SPRR2D SPRR2E SPRR2F SPRR2G SPRR3 ST14 STF1 STFA TADG14 TADG15 TCHH TGM1 TGM5 TGMX THH THL THW TRHY WAP3 WFDC14 XP5	Homo sapiens (human)
Formation of the beta-catenin:TCF transactivating complex	B-cell CLL/lymphoma 9 protein B-cell CLL/lymphoma 9-like protein CREB-binding protein Catenin beta-1 Histone H2A type 1-B/E Histone H2A type 1-C Histone H2A type 1-D Histone H2A type 1-J Histone H2A type 2-A Histone H2A type 2-C Histone H2A-Bbd type 1 Histone H2A.J Histone H2A.V Histone H2AX Histone H2B type 1-A Histone H2B type 1-B Histone H2B type 1-C/E/F/G/I Histone H2B type 1-D Histone H2B type 1-H Histone H2B type 1-J Histone H2B type 1-K Histone H2B type 1-L Histone H2B type 1-M Histone H2B type 1-N Histone H2B type 1-O Histone H2B type 2-E Histone H2B type 3-B Histone H2B type F-S Histone H3.1 Histone H3.1t Histone H3.2 Histone H3.3 Histone H4 Histone acetyltransferase KAT5 Histone acetyltransferase p300 Histone deacetylase 1 Histone-lysine N-methyltransferase 2D Lymphoid enhancer-binding factor 1 Menin Parafibromin Pygopus homolog 1 Pygopus homolog 2 RNA polymerase-associated protein LEO1 Retinoblastoma-binding protein 5 RuvB-like 1 Set1/Ash2 histone methyltransferase complex subunit ASH2 Telomerase reverse transcriptase Transcription activator BRG1 Transcription factor 7-like 1 Transcription factor 7-like 2 Transcription factor 7 Transducin-like enhancer protein 1 Transducin-like enhancer protein 2 Transducin-like enhancer protein 3 Transducin-like enhancer protein 4 Transformation/transcription domain-associated protein	O00255 O00512 O14686 O14746 O60814 P04908 P06899 P0C5Y9 P16104 P20671 P23527 P33778 P35222 P36402 P51532 P57053 P58876 P62805 P62807 P68431 P84243 Q04724 Q04725 Q04726 Q04727 Q09472 Q13547 Q15291 Q16695 Q16777 Q16778 Q6FI13 Q6P1J9 Q71DI3 Q71UI9 Q86UU0 Q8N257 Q8WVC0 Q92793 Q92993 Q93077 Q93079 Q96A08 Q99877 Q99878 Q99879 Q99880 Q9BRQ0 Q9BTM1 Q9HCS4 Q9NQB0 Q9UBL3 Q9UJU2 Q9Y265 Q9Y3Y4 Q9Y4A5	ALR ASH2L ASH2L1 BAF190A BCL9 BCL9L BRG1 C1orf28 CBP CDC73 CREBBP CTNNB CTNNB1 DLNB11 EP300 EST2 GRG4 H2AB1 H2AC14 H2AC18 H2AC19 H2AC20 H2AC4 H2AC6 H2AC7 H2AC8 H2AFA H2AFB1 H2AFE H2AFG H2AFJ H2AFL H2AFM H2AFO H2AFQ H2AFV H2AFX H2AJ H2AV H2AX H2AZ2 H2BC1 H2BC10 H2BC11 H2BC12 H2BC12L H2BC13 H2BC14 H2BC15 H2BC17 H2BC21 H2BC26 H2BC3 H2BC4 H2BC5 H2BC6 H2BC7 H2BC8 H2BC9 H2BFA H2BFB H2BFC H2BFD H2BFE H2BFF H2BFG H2BFH H2BFJ H2BFK H2BFL H2BFN H2BFQ H2BFR H2BFS H2BFT H2BS1 H2BU1 H3-3A H3-3B H3-4 H3.3A H3.3B H3C1 H3C10 H3C11 H3C12 H3C13 H3C14 H3C15 H3C2 H3C3 H3C4 H3C6 H3C7 H3C8 H3F2 H3F3 H3F3A H3F3B H3FA H3FB H3FC HIST1H3C H3FD H3FF H3FH H3FI H3FJ H3FK H3FL H3FM H3FT H4-16 H4/A H4/B H4/C H4/D H4/E H4/G H4/H H4/I H4/J H4/K H4/M H4/N H4/O H4C1 H4C11 H4C12 H4C13 H4C14 H4C15 H4C16 H4C2 H4C3 H4C4 H4C5 H4C6 H4C8 H4C9 H4F2 H4FA H4FB H4FC H4FD H4FE H4FG H4FH H4FI H4FJ H4FK H4FM H4FN H4FO HDAC1 HIRIP1 HIRIP2 HIST1H2AB HIST1H2AC HIST1H2AD HIST1H2AE HIST1H2AJ HIST1H2BA HIST1H2BB HIST1H2BC HIST1H2BD HIST1H2BE HIST1H2BF HIST1H2BG HIST1H2BH HIST1H2BI HIST1H2BJ HIST1H2BK HIST1H2BL HIST1H2BM HIST1H2BN HIST1H2BO HIST1H3A HIST1H3B HIST1H3D HIST1H3E HIST1H3F HIST1H3G HIST1H3H HIST1H3I HIST1H3J HIST1H4A HIST1H4B HIST1H4C HIST1H4D HIST1H4E HIST1H4F HIST1H4H HIST1H4I HIST1H4J HIST1H4K HIST1H4L HIST2H2AA HIST2H2AA3 HIST2H2AA4 HIST2H2AC HIST2H2BE HIST2H3A HIST2H3C HIST2H3D HIST2H4 HIST2H4A HIST2H4B HIST3H2BB HIST3H3 HIST4H4 HRPT2 HTATIP INO80H KAT5 KIAA1261 KIAA1547 KMT2D LEF1 LEO1 MEN1 MLL2 MLL4 NMP238 P300 PAF400 PYGO1 PYGO2 RBBP5 RBQ3 RDL RPD3L1 RUVBL1 SCG2 SMARCA4 SNF2B SNF2L4 TCF1 TCF3 TCF4 TCF7 TCF7L1 TCF7L2 TCS1 TERT TIP49 TIP49A TIP60 TLE1 TLE2 TLE3 TLE4 TRRAP TRT TSH2B	Homo sapiens (human)
Formation of the anterior neural plate	Homeobox protein GBX-2 Homeobox protein NANOG Homeobox protein OTX2 POU domain, class 3, transcription factor 1 POU domain, class 5, transcription factor 1 Paired box protein Pax-6 Transcription factor SOX-1 Transcription factor SOX-2 Zinc finger E-box-binding homeobox 2 Zinc finger protein 521 Zinc finger protein ZIC 2	O00570 O60315 O95409 P26367 P32243 P48431 P52951 Q01860 Q03052 Q96K83 Q9H9S0	AN2 EHZF GBX2 KIAA0569 LIP3 NANOG OCT3 OCT4 OCT6 OTF3 OTF6 OTX2 PAX6 POU3F1 POU5F1 SIP1 SOX1 SOX2 ZEB2 ZFHX1B ZFX1B ZIC2 ZNF521	Homo sapiens (human)
Formation of the active cofactor, UDP-glucuronate	Nucleotide sugar transporter SLC35D1 UDP-glucose 6-dehydrogenase UTP--glucose-1-phosphate uridylyltransferase	O60701 Q16851 Q9NTN3	KIAA0260 SLC35D1 UGDH UGP1 UGP2 UGTREL7	Homo sapiens (human)
Formation of the HIV-1 Early Elongation Complex	CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 P13984 P18074 P18615 P19387 P19388 P19447 P24928 P30876 P32780 P35269 P36954 P50613 P51946 P51948 P52298 P52434 P52435 P53803 P61218 P62487 P62875 P63272 Q09161 Q13888 Q13889 Q6ZYL4 Q8IXH7 Q8WX92 Q92759 Q9H3P2 Q9Y5B0	BTF2 BTF2P44 C6orf175 CAK CAK1 CAP35 CBP20 CBP80 CCNH CDK7 CDKN7 COBRA1 CTDP1 ERCC2 ERCC3 FCP1 GTF2F1 GTF2F2 GTF2H1 GTF2H2 GTF2H3 GTF2H4 GTF2H5 KIAA1182 MAT1 MNAT1 MO15 NCBP NCBP1 NCBP2 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RNF66 RPB7 SPT4H SPT5 SPT5H STK1 SUPT4H SUPT4H1 SUPT5H TH1 TH1L TTDA WHSC2 XPB XPBC XPD XPDC	Homo sapiens (human)
Formation of the Editosome	APOBEC1 complementation factor C->U-editing enzyme APOBEC-1 C->U-editing enzyme APOBEC-2 DNA dC->dU-editing enzyme APOBEC-3A DNA dC->dU-editing enzyme APOBEC-3B DNA dC->dU-editing enzyme APOBEC-3C DNA dC->dU-editing enzyme APOBEC-3H Putative C->U-editing enzyme APOBEC-4	P31941 P41238 Q6NTF7 Q8WW27 Q9NQ94 Q9NRW3 Q9UH17 Q9Y235	A1CF ACF APOBEC1 APOBEC1L APOBEC2 APOBEC3A APOBEC3B APOBEC3C APOBEC3H APOBEC4 ASP C1orf169 PBI	Homo sapiens (human)
Formation of the Early Elongation Complex	CDK-activating kinase assembly factor MAT1 Cyclin-H Cyclin-dependent kinase 7 DNA-directed RNA polymerase II subunit RPB11-a DNA-directed RNA polymerase II subunit RPB1 DNA-directed RNA polymerase II subunit RPB2 DNA-directed RNA polymerase II subunit RPB3 DNA-directed RNA polymerase II subunit RPB4 DNA-directed RNA polymerase II subunit RPB7 DNA-directed RNA polymerase II subunit RPB9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 DNA-directed RNA polymerases I, II, and III subunit RPABC2 DNA-directed RNA polymerases I, II, and III subunit RPABC3 DNA-directed RNA polymerases I, II, and III subunit RPABC4 DNA-directed RNA polymerases I, II, and III subunit RPABC5 General transcription and DNA repair factor IIH helicase subunit XPD General transcription and DNA repair factor IIH helicase/translocase subunit XPB General transcription factor IIF subunit 1 General transcription factor IIF subunit 2 General transcription factor IIH subunit 1 General transcription factor IIH subunit 2 General transcription factor IIH subunit 3 General transcription factor IIH subunit 4 General transcription factor IIH subunit 5 Negative elongation factor A Negative elongation factor B Negative elongation factor C/D Negative elongation factor E Nuclear cap-binding protein subunit 1 Nuclear cap-binding protein subunit 2 RNA polymerase II subunit A C-terminal domain phosphatase Transcription elongation factor SPT4 Transcription elongation factor SPT5	O00267 O15514 P13984 P18074 P18615 P19387 P19388 P19447 P24928 P30876 P32780 P35269 P36954 P50613 P51946 P51948 P52298 P52434 P52435 P53803 P61218 P62487 P62875 P63272 Q09161 Q13888 Q13889 Q6ZYL4 Q8IXH7 Q8WX92 Q92759 Q9H3P2 Q9Y5B0	BTF2 BTF2P44 C6orf175 CAK CAK1 CAP35 CBP20 CBP80 CCNH CDK7 CDKN7 COBRA1 CTDP1 ERCC2 ERCC3 FCP1 GTF2F1 GTF2F2 GTF2H1 GTF2H2 GTF2H3 GTF2H4 GTF2H5 KIAA1182 MAT1 MNAT1 MO15 NCBP NCBP1 NCBP2 NELFA NELFB NELFCD NELFD NELFE POLR2 POLR2A POLR2B POLR2C POLR2D POLR2E POLR2F POLR2G POLR2H POLR2I POLR2J POLR2J1 POLR2K POLR2L POLRF RAP30 RAP74 RD RDBP RNF66 RPB7 SPT4H SPT5 SPT5H STK1 SUPT4H SUPT4H1 SUPT5H TH1 TH1L TTDA WHSC2 XPB XPBC XPD XPDC	Homo sapiens (human)
Formation of selenosugars for excretion				Homo sapiens (human)	G61418DU
Formation of paraxial mesoderm	Bone morphogenetic protein 4 CREB-binding protein Catenin beta-1 Delta-like protein 1 Delta-like protein 3 Fibroblast growth factor receptor 1 Histone acetyltransferase KAT2A Histone acetyltransferase KAT2B Histone acetyltransferase p300 Lymphoid enhancer-binding factor 1 Mastermind-like domain-containing protein 1 Mastermind-like protein 1 Mastermind-like protein 2 Mastermind-like protein 3 Mesogenin-1 Neurogenic locus notch homolog protein 1 Noggin Protein Wnt-3a Recombining binding protein suppressor of hairless SNW domain-containing protein 1 T-box transcription factor T T-box transcription factor TBX6	A6NI15 O00548 O15178 O95947 P11362 P12644 P35222 P46531 P56704 Q06330 Q09472 Q13253 Q13495 Q13573 Q8IZL2 Q92585 Q92793 Q92830 Q92831 Q96JK9 Q9NYJ7 Q9UJU2	BFGFR BMP2B BMP4 CBP CEK CG1 CREBBP CTNNB CTNNB1 CXorf6 DLL1 DLL3 DVR4 EP300 FGFBR FGFR1 FLG FLT2 GCN5 GCN5L2 HBGFR IGKJRB IGKJRB1 KAT2A KAT2B KIAA0200 KIAA1816 KIAA1819 LEF1 MAML1 MAML2 MAML3 MAMLD1 MSGN1 NOG NOTCH1 P300 PCAF RBPJ RBPJK RBPSUH SKIIP SKIP SNW1 T TAN1 TBX6 TBXT WNT3A	Homo sapiens (human)
Formation of lateral plate mesoderm	Bone morphogenetic protein 4 Forkhead box protein F1 Indian hedgehog protein Sonic hedgehog protein Transcription factor GATA-4	P12644 P43694 Q12946 Q14623 Q15465	BMP2B BMP4 DVR4 FKHL5 FOXF1 FREAC1 GATA4 IHH SHH	Homo sapiens (human)
Formation of intermediate mesoderm	Bone morphogenetic protein 4 Fibroblast growth factor 2 Forkhead box protein C1 Forkhead box protein C2 LIM/homeobox protein Lhx1 Paired box protein Pax-2 Paired box protein Pax-8 Protein odd-skipped-related 1	P09038 P12644 P48742 Q02962 Q06710 Q12948 Q8TAX0 Q99958	BMP2B BMP4 DVR4 FGF2 FGFB FKHL14 FKHL7 FOXC1 FOXC2 FREAC3 LHX1 LIM-1 LIM1 MFH1 ODD OSR1 PAX2 PAX8	Homo sapiens (human)
Formation of editosomes by ADAR proteins	Double-stranded RNA-specific adenosine deaminase Double-stranded RNA-specific editase 1	P55265 P78563	ADAR ADAR1 ADAR2 ADARB1 DRADA2 DSRAD G1P1 IFI4 RED1	Homo sapiens (human)
Formation of definitive endoderm	C-X-C chemokine receptor type 4 Cadherin-1 Catenin beta-1 Eomesodermin homolog Hepatocyte nuclear factor 3-beta Homeobox protein MIXL1 Homeobox protein goosecoid Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Mothers against decapentaplegic homolog 4 T-box transcription factor T Transcription factor 7-like 2 Transcription factor GATA-4 Transcription factor GATA-6 Transcription factor SOX-17	O15178 O95936 P12830 P35222 P43694 P56915 P61073 P84022 Q13485 Q15796 Q92908 Q9H2W2 Q9H6I2 Q9NQB0 Q9Y261	CDH1 CDHE CTNNB CTNNB1 CXCR4 DPC4 EOMES FOXA2 GATA4 GATA6 GSC HNF3B MADH2 MADH3 MADH4 MADR2 MIXL MIXL1 SMAD2 SMAD3 SMAD4 SOX17 T TBR2 TBXT TCF3B TCF4 TCF7L2 UVO	Homo sapiens (human)
Formation of axial mesoderm	Catenin beta-1 Forkhead box protein H1 Hepatocyte nuclear factor 3-alpha Hepatocyte nuclear factor 3-beta Homeobox protein notochord Lymphoid enhancer-binding factor 1 Mothers against decapentaplegic homolog 2 Mothers against decapentaplegic homolog 3 Sonic hedgehog protein T-box transcription factor T Transcription factor 7 Transcriptional coactivator YAP1 Transcriptional enhancer factor TEF-3 Transcriptional enhancer factor TEF-4	A8MTQ0 O15178 O75593 P35222 P36402 P46937 P55317 P84022 Q15465 Q15561 Q15562 Q15796 Q9UJU2 Q9Y261	CTNNB CTNNB1 FAST1 FAST2 FOXA1 FOXA2 FOXH1 HNF3A HNF3B LEF1 MADH2 MADH3 MADR2 NOTO RTEF1 SHH SMAD2 SMAD3 T TBXT TCF1 TCF13L1 TCF3A TCF3B TCF7 TEAD2 TEAD4 TEF3 TEF4 YAP1 YAP65	Homo sapiens (human)
Formation of apoptosome	Apoptotic protease-activating factor 1 Caspase recruitment domain-containing protein 8 Caspase-9 Cell death regulator Aven Cytochrome c Methylthioribulose-1-phosphate dehydratase	O14727 P55211 P99999 Q96GX9 Q9NQS1 Q9Y2G2	APAF1 APIP AVEN CARD8 CASP9 CYC CYCS DACAR KIAA0413 KIAA0955 MCH6 NDPP1	Homo sapiens (human)
Formation of annular gap junctions	AP-2 complex subunit mu Clathrin heavy chain 1 Clathrin heavy chain 2 Clathrin light chain A Clathrin light chain B Disabled homolog 2 Dynamin-1 Dynamin-2 Gap junction alpha-1 protein	P09496 P09497 P17302 P50570 P53675 P98082 Q00610 Q05193 Q96CW1	AP2M1 CLAPM1 CLH17 CLH22 CLTA CLTB CLTC CLTCL CLTCL1 CLTCL2 CLTD DAB2 DNM DNM1 DNM2 DOC2 DYN2 GJA1 GJAL KIAA0034 KIAA0109	Homo sapiens (human)
Formation of a pool of free 40S subunits	Eukaryotic translation initiation factor 1A, X-chromosomal Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit D Eukaryotic translation initiation factor 3 subunit E Eukaryotic translation initiation factor 3 subunit F Eukaryotic translation initiation factor 3 subunit G Eukaryotic translation initiation factor 3 subunit H Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Eukaryotic translation initiation factor 3 subunit K Eukaryotic translation initiation factor 3 subunit L Eukaryotic translation initiation factor 3 subunit M Large ribosomal subunit protein P1 Large ribosomal subunit protein P2 Large ribosomal subunit protein eL13 Large ribosomal subunit protein eL14 Large ribosomal subunit protein eL15 Large ribosomal subunit protein eL18 Large ribosomal subunit protein eL19 Large ribosomal subunit protein eL20 Large ribosomal subunit protein eL21 Large ribosomal subunit protein eL22 Large ribosomal subunit protein eL24 Large ribosomal subunit protein eL27 Large ribosomal subunit protein eL28 Large ribosomal subunit protein eL29 Large ribosomal subunit protein eL30 Large ribosomal subunit protein eL31 Large ribosomal subunit protein eL32 Large ribosomal subunit protein eL33 Large ribosomal subunit protein eL34 Large ribosomal subunit protein eL36 Large ribosomal subunit protein eL37 Large ribosomal subunit protein eL38 Large ribosomal subunit protein eL39 Large ribosomal subunit protein eL42 Large ribosomal subunit protein eL43 Large ribosomal subunit protein eL6 Large ribosomal subunit protein eL8 Large ribosomal subunit protein uL10 Large ribosomal subunit protein uL11 Large ribosomal subunit protein uL13 Large ribosomal subunit protein uL14 Large ribosomal subunit protein uL15 Large ribosomal subunit protein uL16 Large ribosomal subunit protein uL18 Large ribosomal subunit protein uL1 Large ribosomal subunit protein uL22 Large ribosomal subunit protein uL23 Large ribosomal subunit protein uL24 Large ribosomal subunit protein uL29 Large ribosomal subunit protein uL2 Large ribosomal subunit protein uL30 Large ribosomal subunit protein uL3 Large ribosomal subunit protein uL4 Large ribosomal subunit protein uL5 Large ribosomal subunit protein uL6 Ribosomal protein eL22-like Ribosomal protein eL39-like 2 Ribosomal protein eL42-like Ribosomal protein eS27-like Ribosomal protein uL16-like Ribosomal protein uL24-like Ribosomal protein uL3-like Small ribosomal subunit protein eS10 Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17 Small ribosomal subunit protein eS19 Small ribosomal subunit protein eS1 Small ribosomal subunit protein eS21 Small ribosomal subunit protein eS24 Small ribosomal subunit protein eS25 Small ribosomal subunit protein eS26 Small ribosomal subunit protein eS27 Small ribosomal subunit protein eS28 Small ribosomal subunit protein eS32 Small ribosomal subunit protein eS4, X isoform Small ribosomal subunit protein eS4, Y isoform 1 Small ribosomal subunit protein eS4, Y isoform 2 Small ribosomal subunit protein eS6 Small ribosomal subunit protein eS7 Small ribosomal subunit protein eS8 Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11 Small ribosomal subunit protein uS12 Small ribosomal subunit protein uS13 Small ribosomal subunit protein uS14 Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17 Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2 Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4 Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS8 Small ribosomal subunit protein uS9 Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein Ubiquitin-ribosomal protein eL40 fusion protein Ubiquitin-ribosomal protein eS31 fusion protein	O00303 O15371 O15372 O75821 O75822 P05386 P05387 P05388 P08708 P08865 P15880 P18077 P18124 P18621 P22090 P23396 P25398 P26373 P27635 P30050 P32969 P35268 P36578 P39019 P39023 P40429 P42677 P42766 P46776 P46777 P46778 P46779 P46781 P46782 P46783 P47813 P47914 P49207 P50914 P55884 P60228 P60866 P61247 P61254 P61313 P61353 P61513 P61927 P62081 P62241 P62244 P62249 P62263 P62266 P62269 P62273 P62277 P62280 P62424 P62701 P62750 P62753 P62829 P62841 P62847 P62851 P62854 P62857 P62861 P62888 P62891 P62899 P62906 P62910 P62913 P62917 P62945 P62979 P62987 P63173 P63220 P83731 P83881 P84098 Q02543 Q02878 Q07020 Q13347 Q14152 Q6P5R6 Q71UM5 Q7L2H7 Q8TD47 Q92901 Q969Q0 Q96EH5 Q96L21 Q99613 Q9UBQ5 Q9UNX3 Q9Y262 Q9Y3U8	BBC1 CCG2 D11S2243E D6S218E DXS648E EC45 EIF1A EIF1AX EIF3A EIF3B EIF3C EIF3D EIF3E EIF3EIP EIF3F EIF3G EIF3H EIF3I EIF3J EIF3K EIF3L EIF3M EIF3S1 EIF3S10 EIF3S12 EIF3S2 EIF3S3 EIF3S4 EIF3S5 EIF3S6 EIF3S6IP EIF3S7 EIF3S8 EIF3S9 EIF4C FAU FTE1 HFLB5 INT6 KIAA0139 LAMBR LAMR1 MFTL MPS1 NEDD6 PCID1 QM RIG RPL1 RPL10 RPL10A RPL10L RPL11 RPL12 RPL13 RPL13A RPL14 RPL15 RPL17 RPL18 RPL18A RPL19 RPL21 RPL22 RPL22L1 RPL23 RPL23A RPL24 RPL26 RPL26L1 RPL26P1 RPL27 RPL27A RPL28 RPL29 RPL3 RPL30 RPL31 RPL32 RPL34 RPL35 RPL35A RPL36 RPL36A RPL36AL RPL37 RPL37A RPL38 RPL39 RPL39L RPL39L1 RPL3L RPL4 RPL41 RPL44 RPL5 RPL6 RPL7 RPL7A RPL8 RPL9 RPL9P7 RPL9P8 RPL9P9 RPLP0 RPLP1 RPLP2 RPP2 RPS10 RPS11 RPS12 RPS13 RPS14 RPS15 RPS15A RPS16 RPS17 RPS17L RPS18 RPS19 RPS2 RPS20 RPS21 RPS23 RPS24 RPS25 RPS26 RPS27 RPS27A RPS27L RPS28 RPS29 RPS3 RPS3A RPS4 RPS4X RPS4Y RPS4Y1 RPS4Y2 RPS4Y2P RPS5 RPS6 RPS7 RPS8 RPS9 RPSA RRP1 SCAR SURF-3 SURF3 TRIP1 TXREB1 UBA52 UBA80 UBCEP1 UBCEP2	Homo sapiens (human)
Formation of WDR5-containing histone-modifying complexes	A-kinase anchor protein 8-like Biorientation of chromosomes in cell division protein 1-like 1 Biorientation of chromosomes in cell division protein 1 CXXC-type zinc finger protein 1 Cysteine-rich protein 2-binding protein Histone acetyltransferase KAT2A Histone acetyltransferase KAT2B Histone acetyltransferase KAT8 Histone-lysine N-methyltransferase 2A Histone-lysine N-methyltransferase 2B Histone-lysine N-methyltransferase 2C Histone-lysine N-methyltransferase 2D Histone-lysine N-methyltransferase SETD1A Histone-lysine N-methyltransferase SETD1B Host cell factor 1 Host cell factor 2 KAT8 regulatory NSL complex subunit 1 KAT8 regulatory NSL complex subunit 2 KAT8 regulatory NSL complex subunit 3 Lysine-specific demethylase 6A MAP3K12-binding inhibitory protein 1 Menin Microspherule protein 1 Nuclear receptor coactivator 6 PAX-interacting protein 1 PAXIP1-associated glutamate-rich protein 1 PC4 and SFRS1-interacting protein PHD finger protein 20-like protein 1 PHD finger protein 20 Protein Dr1 Protein dpy-30 homolog Retinoblastoma-binding protein 5 SAGA-associated factor 29 Set1/Ash2 histone methyltransferase complex subunit ASH2 Threonine aspartase 1 Transcriptional adapter 2-alpha Transcriptional adapter 3 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit WD repeat-containing protein 5 WD repeat-containing protein 82 YEATS domain-containing protein 2 ZZ-type zinc finger-containing protein 3	A8MW92 O00255 O14686 O15047 O15294 O15550 O75475 O75478 O75528 P51610 P61964 Q01658 Q03164 Q14686 Q15291 Q6UXN9 Q6ZW49 Q7Z3B3 Q8IYH5 Q8NEZ4 Q8NFC6 Q92830 Q92831 Q96ES7 Q96EZ8 Q96IK1 Q9BTK6 Q9BVI0 Q9C005 Q9H6P5 Q9H7Z6 Q9H8E8 Q9H9L4 Q9NS73 Q9P0U4 Q9P2N6 Q9UBL3 Q9ULM3 Q9ULX6 Q9UMN6 Q9UPS6 Q9Y5Z7	ADA3 AIB3 AKAP8L ALL1 ALR ASH2L ASH2L1 BIG3 BOD1 BOD1L BOD1L1 C12orf41 C16orf53 C20orf104 C20orf13 CCDC101 CENP-36 CFP1 CGBP CSRP2BP CXXC1 CXXC7 DFS70 DPY30 DR1 FAM44A FAM44B GCN5 GCN5L2 GLEA2 HALR HCA58 HCF1 HCFC1 HCFC2 HFC1 HRX HRX2 HTRX INO80Q KANSL1 KANSL2 KANSL3 KAT14 KAT2A KAT2B KAT8 KDM6A KIAA0181 KIAA0304 KIAA0339 KIAA1076 KIAA1197 KIAA1267 KIAA1310 KIAA1327 KIAA1506 KMT2A KMT2B KMT2C KMT2D KMT2F KMT2G LEDGF MBIP MCRS1 MEN1 MLL MLL1 MLL2 MLL3 MLL4 MOF MSL1V1 MSP58 MYST1 NAKAP NAKAP95 NCOA6 NSL1 NSL2 NSL3 NZF OGT PA1 PAGR1 PAXIP1 PAXIP1L PCAF PCCX1 PHF18 PHF20 PHF20L1 PRTD PSIP1 PSIP2 PTIP RAP250 RBBP5 RBQ3 SCG2 SET1 SET1A SET1B SETD1A SETD1B SGF29 SI1 SWD2 TADA2A TADA2L TADA3 TADA3L TASP1 TMEM113 TRBP TRX1 TRX2 TZP UTX WBP7 WDR5 WDR82 WDR82A YEATS2 ZZZ3	Homo sapiens (human)

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