GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 426 - 450 of 1070 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID ▲
RUNX3 regulates WNT signaling
  • Catnb
  • Ctnnb1
  • Lef1
  • Runx3
  • Tcf7
  • Tcf7l1
  • Tcf7l2
Rattus norvegicus (Norway rat)
Sphingolipid catabolism
  • Acer1
  • Acer2
  • Acer3
  • Aldh3a2
  • Aldh3b1
  • Aldh3b2
  • Aldh4
  • Lpp1
  • Lpp2
  • Lpp3
  • Plpp1
  • Plpp2
  • Plpp3
  • Ppap2a
  • Ppap2b
  • Ppap2c
  • Sgpl1
  • Sgpp1
  • Sgpp2
  • Spl
Rattus norvegicus (Norway rat)
Transcriptional activation of mitochondrial biogenesis
  • AC128290.1
  • Acss2
  • Cycs
  • Cycsl2
  • Cycsl3
  • Gabpa
  • Gabpb1
  • Glud
  • Glud1
  • Idh2
  • LOC690675
  • RGD1562558
  • SIRT4
  • Sirt3
  • Sirt4
  • Sirt5
  • Sod2
Rattus norvegicus (Norway rat)
Regulation of lipid metabolism by PPARalpha
  • Carm1
  • Cbp
  • Chd9
  • Crebbp
  • Fabp1
  • Hdac3
  • Med1
  • Ncoa1
  • Ncoa2
  • Ncoa6ip
  • Ncor2
  • Nr1c1
  • Nr2b1
  • Pimt
  • Ppar
  • Ppara
  • Prmt4
  • Rxra
  • Sin3a
  • Sin3b
  • Smarcd3
  • Tbl1x
  • Tbl1xr1
  • Tgs1
  • Tif2
Rattus norvegicus (Norway rat)
RHOG GTPase cycle
  • AABR07021955.1
  • Ankle2
  • Arfgap3
  • Arhgap1
  • Arhgap21
  • Arhgap32
  • Arhgap35
  • Arhgap5
  • Arhgdia
  • Arhgdib
  • Arhgdig
  • Arhgef16
  • Arhgef26
  • Arhgef5
  • Borg5
  • Cav
  • Cav1
  • Cdc42
  • Cdc42ep1
  • Cyfip1
  • Depdc1b
  • Diaph3
  • Dock2
  • Dock3
  • Dock4
  • Dock5
  • Dsg2
  • Duo
  • Ehsh1
  • Elmo2
  • Emd
  • Epha2
  • Ergic53
  • Esyt1
  • Fam62a
  • Garre1
  • Grlf1
  • Hapip
  • Hspe1
  • Iqgap2
  • Itgb1
  • Itsn
  • Itsn1
  • Kalrn
  • Ktn1
  • LOC687105
  • Lamtor1
  • Lbr
  • Lem4
  • Letm1
  • Lman1
  • Map3k11
  • Mbc2
  • Mcam
  • Mcf2
  • Mcf2l
  • Mlk3
  • Mpp7
  • Muc18
  • Ndufa5
  • Ndufs3
  • Ophn1
  • Ost
  • P190A
  • Pak2
  • Pak4
  • Pgrmc2
  • Pik3r1
  • Pld1
  • Plekhg3
  • Prex1
  • Rab7
  • Rab7a
  • Rbm39
  • Rhog
  • Shmt2
  • Stbd1
  • Stx5
  • Stx5a
  • Syb3
  • Tfrc
  • Trfr
  • Trio
  • Vamp3
  • Vangl1
  • Vapb
  • Vav
  • Vav1
  • Vav2
  • Vav3
  • Vrk2
  • Ykt6
  • p190ARHOGAP
Rattus norvegicus (Norway rat)
CaMK IV-mediated phosphorylation of CREB
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk4
  • Camkk1
  • Camkk2
Rattus norvegicus (Norway rat)
Type II Na+/Pi cotransporters
  • Slc17a2
  • Slc34a1
  • Slc34a2
  • Slc34a3
Rattus norvegicus (Norway rat)
SHC-mediated cascade:FGFR4
  • Ash
  • FGF15
  • FGF6
  • Fgf-1
  • Fgf-2
  • Fgf-9
  • Fgf1
  • Fgf16
  • Fgf17
  • Fgf18
  • Fgf19
  • Fgf2
  • Fgf20
  • Fgf23
  • Fgf4
  • Fgf6
  • Fgf7a
  • Fgf7b
  • Fgf8
  • Fgf8a
  • Fgf9
  • Fgfa
  • Fgfr4
  • Grb2
  • Hras
  • Hras1
  • Klb
  • Kras
  • Kras2
  • Nras
  • Shc1
  • Sos1
Rattus norvegicus (Norway rat)
Beta oxidation of myristoyl-CoA to lauroyl-CoA
  • Acadl
  • Hadha
  • Hadhb
Rattus norvegicus (Norway rat)
Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA
  • Acadl
  • Echs1
  • Had
  • Hadh
  • Hadha
  • Hadhb
  • Hadhsc
  • Schad
Rattus norvegicus (Norway rat)
Regulation of RAS by GAPs
  • Cul3
  • Dab2ip
  • Hras
  • Hras1
  • Kbtbd7
  • Kras
  • Kras2
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Nf1
  • Nras
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psma8
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psme4
  • Psmf1
  • Rasa
  • Rasa1
  • Rasa2
  • Rasa3
  • Rasa4
  • Rasal1
  • Rasal2
  • Rasal3
  • Rbx1
  • Ring12
  • Rps27a
  • Spred1
  • Spred2
  • Spred3
  • Sug1
  • Syngap1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
DNA Damage Recognition in GG-NER
  • Actb
  • Actl6a
  • Actr5
  • Actr8
  • Adprt
  • Amida
  • Ccdc95
  • Cetn2
  • Cops1
  • Cops2
  • Cops3
  • Cops4
  • Cops5
  • Cops6
  • Cops7a
  • Cops7b
  • Cops8
  • Csn1
  • Csn2
  • Csn3
  • Csn4
  • Csn8
  • Cul4a
  • Cul4b
  • Ddb1
  • Ddb2
  • Gps1
  • Ino80
  • Ino80b
  • Ino80c
  • Ino80d
  • Ino80e
  • LOC100360645
  • Mcrs1
  • Nfrkb
  • Parp1
  • Parp2
  • Rad23a
  • Rad23b
  • Rbx1
  • Rps27a
  • Ruvbl1
  • Tfpt
  • Tip49
  • Tip49a
  • Trip15
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
  • Xpc
  • Yy1
  • yy1
Rattus norvegicus (Norway rat)
Maturation of TCA enzymes and regulation of TCA cycle
  • Acat1
  • Aco2
  • Fxn
  • Idh2
  • Pgl2
  • Sdh5
  • Sdha
  • Sdhaf2
  • Sirt3
Rattus norvegicus (Norway rat)
Muscarinic acetylcholine receptors
  • Chrm-1
  • Chrm-2
  • Chrm-3
  • Chrm-4
  • Chrm-5
  • Chrm1
  • Chrm2
  • Chrm3
  • Chrm4
  • Chrm5
Rattus norvegicus (Norway rat)
Negative regulation of the PI3K/AKT network
  • Akt1
  • Akt2
  • Akt3
  • Nipk
  • Phlpp
  • Phlpp1
  • Plekhe1
  • Pten
  • Scop
  • Them4
  • Trib3
Rattus norvegicus (Norway rat)
NGF processing
  • Fur
  • Furin
  • Ngf
  • Ngfb
  • Pace4
  • Pcsk3
  • Pcsk5
  • Pcsk6
Rattus norvegicus (Norway rat)
Class A/1 (Rhodopsin-like receptors)
  • Cmklr1
  • Cnr1
  • Cnr2
  • Dez
  • Ebi2
  • Gpbar1
  • Gpr109
  • Gpr109a
  • Gpr109b
  • Gpr132
  • Gpr18
  • Gpr183
  • Gpr35
  • Gpr39
  • Gpr4
  • Gpr55
  • Gpr65
  • Gpr68
  • Gpr80
  • Gpr91
  • Hcar2
  • Mt2
  • Mtnr1b
  • Niacr1
  • Oxgr1
  • P2y15
  • Ptafr
  • Pumag
  • Skr6
  • Sucnr1
  • Tgr5
Rattus norvegicus (Norway rat)
Passive transport by Aquaporins
  • Aqp1
  • Aqp10
  • Aqp11
  • Aqp12a
  • Aqp2
  • Aqp3
  • Aqp4
  • Aqp5
  • Aqp7
  • Aqp8
  • Aqp9
  • Chip28
  • LOC686596
  • Mip
Rattus norvegicus (Norway rat)
The activation of arylsulfatases
  • AABR07013255.1
  • Arsa
  • Arsb
  • Arse
  • Arsg
  • Arsi
  • Arsj
  • Arsk
  • Arsl
  • Sts
  • Sumf1
  • Sumf2
Rattus norvegicus (Norway rat)
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)
  • Akr1c1
  • Akr1c21
  • Cbr
  • Cbr1
  • Cox-1
  • Cox-2
  • Cox1
  • Cox2
  • Cyp5
  • Cyp5a1
  • Cyp8
  • Cyp8b1
  • Gsts
  • Hpgds
  • Hsd17b5
  • Pgds
  • Pges
  • Pig12
  • Ptgds
  • Ptgds2
  • Ptges
  • Ptges2
  • Ptges3
  • Ptgis
  • Ptgs1
  • Ptgs2
  • Tbxas1
  • Tebp
Rattus norvegicus (Norway rat)
PECAM1 interactions
  • Fyn
  • Inpp5d
  • Itgav
  • Itgb3
  • Lck
  • Lyn
  • Pecam
  • Pecam1
  • Plcg1
  • Ptph6
  • Ptpn11
  • Ptpn6
  • Ship
  • Ship1
  • Src
  • Yes1
Rattus norvegicus (Norway rat)
GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2
  • Btrc
  • Cul1
  • Gsk3b
  • LOC100360645
  • LOC100360846
  • LOC100365869
  • Lmp10
  • Lmp2
  • Mecl1
  • Mss1
  • Nfe2l2
  • Nrf2
  • Psma1
  • Psma2
  • Psma3
  • Psma4
  • Psma5
  • Psma6
  • Psma7
  • Psmb1
  • Psmb10
  • Psmb2
  • Psmb3
  • Psmb4
  • Psmb5
  • Psmb6
  • Psmb6l
  • Psmb6l1
  • Psmb7
  • Psmb8
  • Psmb9
  • Psmc1
  • Psmc2
  • Psmc3
  • Psmc4
  • Psmc5
  • Psmc6
  • Psmd1
  • Psmd10
  • Psmd11
  • Psmd12
  • Psmd13
  • Psmd14
  • Psmd2
  • Psmd3
  • Psmd5
  • Psmd6
  • Psmd7
  • Psmd8
  • Psmd9
  • Psme1
  • Psme2
  • Psmf1
  • Rbx1
  • Ring12
  • Rps27a
  • Skp1
  • Skp1a
  • Sug1
  • Tbp1
  • Tbp7
  • Uba80
  • Ubb
  • Ubbl1
  • Ubc
  • Ubcep1
  • Ubcl1
Rattus norvegicus (Norway rat)
RAF activation
  • A-raf
  • Araf
  • Araf1
  • Braf
  • Brap
  • CaMIII
  • Calm3
  • Cam3
  • Camc
  • Camk2a
  • Camk2b
  • Camk2d
  • Camk2g
  • Hras
  • Hras1
  • Jak2
  • Kras
  • Kras2
  • Ksr1
  • LOC100909468
  • Map2k1
  • Map2k2
  • Map3k11
  • Mark3
  • Mek1
  • Mek2
  • Mkk2
  • Mlk3
  • Mras
  • Nras
  • Phb
  • Phb1
  • Ppp1cb
  • Ppp1cc
  • Ppp2ca
  • Ppp2cb
  • Ppp2r1a
  • Ppp2r1b
  • Ppp2r5a
  • Ppp2r5b
  • Ppp2r5c
  • Ppp2r5d
  • Ppp2r5e
  • Prkmk1
  • Prkmk2
  • Raf
  • Raf1
  • Rras3
  • Shoc2
  • Src
  • Ywhab
Rattus norvegicus (Norway rat)
Regulation of the apoptosome activity
  • AC128290.1
  • APIP
  • Apaf1
  • Api3
  • Apip
  • Aven
  • Birc4
  • Casp9
  • Cycs
  • Cycsl2
  • Cycsl3
  • Diablo
  • Diablol1
  • Erk1
  • Erk2
  • LOC100360940
  • LOC690675
  • Mapk
  • Mapk1
  • Mapk3
  • Prkm1
  • Prkm3
  • RGD1562558
  • RNCASP9
  • Xiap
Rattus norvegicus (Norway rat)
Phase I - Functionalization of compounds
  • Aada
  • Aadac
  • Abp1
  • Ahr
  • Ahrr
  • Aldd
  • Aldh3
  • Aldh3a1
  • Aoc1
  • Aoc3
  • Arnt
  • Arnt2
  • Bphl
  • Cbr3
  • Ces1d
  • Ces2b
  • Ces3
  • Cmbl
  • Cyb5b
  • Cyb5m
  • Cyb5r3
  • Cyp2b21
  • Cyp3a-1
  • Cyp3a-2
  • Cyp3a1
  • Cyp3a11
  • Cyp3a13
  • Cyp3a18
  • Cyp3a2
  • Cyp3a62
  • Cyp3a9
  • Dia1
  • Eph-1
  • Ephx1
  • LOC679149
  • Marc2
  • Mg87
  • Mosc2
  • Mtarc2
  • Nqo2
  • Omb5
Rattus norvegicus (Norway rat)

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